Protein–RNA interactions for Protein: P02458

COL2A1, Collagen alpha-1(II) chain, humanhuman

Predicted RBP Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1P02458 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC4.88□□□□□ -1.63
COL2A1P02458 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
COL2A1P02458 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
COL2A1P02458 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
COL2A1P02458 ACADSB-201ENST00000358776 5859 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
COL2A1P02458 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
COL2A1P02458 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
COL2A1P02458 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC4.87□□□□□ -1.63
COL2A1P02458 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC4.87□□□□□ -1.63
COL2A1P02458 STATH-201ENST00000246895 598 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
COL2A1P02458 OR2B3-201ENST00000377173 1106 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
COL2A1P02458 MIR491-201ENST00000384877 84 ntBASIC4.87□□□□□ -1.63
COL2A1P02458 CLEC7A-206ENST00000396484 1000 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
COL2A1P02458 MFAP5-202ENST00000396549 1195 ntTSL 2 BASIC4.87□□□□□ -1.63
COL2A1P02458 NDUFB4P4-201ENST00000404822 243 ntBASIC4.87□□□□□ -1.63
COL2A1P02458 AL161631.1-201ENST00000417933 486 ntBASIC4.87□□□□□ -1.63
COL2A1P02458 PDSS1P1-201ENST00000422953 1114 ntBASIC4.87□□□□□ -1.63
COL2A1P02458 SKP1P3-201ENST00000429280 487 ntBASIC4.87□□□□□ -1.63
COL2A1P02458 AL035246.1-201ENST00000433554 1255 ntBASIC4.87□□□□□ -1.63
COL2A1P02458 LBX1-AS1-202ENST00000434878 418 ntTSL 5 BASIC4.87□□□□□ -1.63
COL2A1P02458 AL500522.2-201ENST00000448562 343 ntBASIC4.87□□□□□ -1.63
COL2A1P02458 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC4.87□□□□□ -1.63
COL2A1P02458 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC4.87□□□□□ -1.63
COL2A1P02458 DDHD2-219ENST00000529845 945 ntTSL 5 BASIC4.87□□□□□ -1.63
COL2A1P02458 AC007423.1-201ENST00000605009 627 ntBASIC4.87□□□□□ -1.63
COL2A1P02458 AC005972.3-201ENST00000606304 481 ntBASIC4.87□□□□□ -1.63
COL2A1P02458 AC034229.4-201ENST00000607861 441 ntBASIC4.87□□□□□ -1.63
COL2A1P02458 AC090912.3-201ENST00000609775 533 ntBASIC4.87□□□□□ -1.63
COL2A1P02458 AL138721.1-201ENST00000616756 179 ntBASIC4.87□□□□□ -1.63
COL2A1P02458 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
COL2A1P02458 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC4.87□□□□□ -1.63
COL2A1P02458 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
COL2A1P02458 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
COL2A1P02458 ZNF283-201ENST00000324461 2297 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
COL2A1P02458 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC4.86□□□□□ -1.63
COL2A1P02458 MTCO1P8-201ENST00000416914 1523 ntBASIC4.86□□□□□ -1.63
COL2A1P02458 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
COL2A1P02458 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
COL2A1P02458 EIF3EP2-201ENST00000423042 1814 ntBASIC4.86□□□□□ -1.63
COL2A1P02458 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC4.86□□□□□ -1.63
COL2A1P02458 AL031656.1-202ENST00000457704 1995 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
COL2A1P02458 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
COL2A1P02458 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC4.86□□□□□ -1.63
COL2A1P02458 HNMT-201ENST00000280096 504 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
COL2A1P02458 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC4.86□□□□□ -1.63
COL2A1P02458 PRELID3BP10-201ENST00000431957 584 ntBASIC4.86□□□□□ -1.63
COL2A1P02458 TH2LCRR-202ENST00000435042 472 ntTSL 5 BASIC4.86□□□□□ -1.63
COL2A1P02458 RPS4XP4-201ENST00000443195 763 ntBASIC4.86□□□□□ -1.63
COL2A1P02458 AC012158.1-204ENST00000483430 465 ntBASIC4.86□□□□□ -1.63
COL2A1P02458 AC110792.1-201ENST00000491826 472 ntBASIC4.86□□□□□ -1.63
COL2A1P02458 DEFB109F-201ENST00000491870 277 ntBASIC4.86□□□□□ -1.63
COL2A1P02458 PANCR-201ENST00000503456 493 ntTSL 5 BASIC4.86□□□□□ -1.63
COL2A1P02458 OR10J4-201ENST00000504970 935 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
COL2A1P02458 TRMT10BP1-201ENST00000519377 943 ntBASIC4.86□□□□□ -1.63
COL2A1P02458 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC4.86□□□□□ -1.63
COL2A1P02458 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC4.86□□□□□ -1.63
COL2A1P02458 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC4.86□□□□□ -1.63
COL2A1P02458 PSMA3-213ENST00000557508 814 ntTSL 5 BASIC4.86□□□□□ -1.63
COL2A1P02458 AC104574.1-201ENST00000561182 925 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
COL2A1P02458 AC105020.2-201ENST00000564683 572 ntTSL 5 BASIC4.86□□□□□ -1.63
COL2A1P02458 MIR3936-201ENST00000584304 110 ntBASIC4.86□□□□□ -1.63
COL2A1P02458 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC4.86□□□□□ -1.63
COL2A1P02458 LINC01862-201ENST00000593792 478 ntTSL 2 BASIC4.86□□□□□ -1.63
COL2A1P02458 MKKS-203ENST00000609375 882 ntTSL 2 BASIC4.86□□□□□ -1.63
COL2A1P02458 AC012314.7-201ENST00000619693 93 ntBASIC4.86□□□□□ -1.63
COL2A1P02458 AC097520.1-201ENST00000624435 385 ntBASIC4.86□□□□□ -1.63
COL2A1P02458 AC007389.5-201ENST00000629214 744 ntTSL 5 BASIC4.86□□□□□ -1.63
COL2A1P02458 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC4.86□□□□□ -1.63
COL2A1P02458 AC006927.4-201ENST00000639187 543 ntBASIC4.86□□□□□ -1.63
COL2A1P02458 CD84-208ENST00000534968 7885 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
COL2A1P02458 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
COL2A1P02458 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
COL2A1P02458 C9orf57-201ENST00000377024 1502 ntAPPRIS P2 TSL 1 (best) BASIC4.86□□□□□ -1.63
COL2A1P02458 MTO1-212ENST00000498286 10857 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
COL2A1P02458 LINC01362-202ENST00000452901 1712 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
COL2A1P02458 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
COL2A1P02458 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
COL2A1P02458 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
COL2A1P02458 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC4.85□□□□□ -1.63
COL2A1P02458 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
COL2A1P02458 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC4.85□□□□□ -1.63
COL2A1P02458 TM4SF20-201ENST00000304568 2296 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
COL2A1P02458 LINC02060-201ENST00000506041 1626 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
COL2A1P02458 AL513548.1-201ENST00000562904 1724 ntBASIC4.85□□□□□ -1.63
COL2A1P02458 AC233968.1-201ENST00000611212 1300 ntBASIC4.85□□□□□ -1.63
COL2A1P02458 KMT2E-216ENST00000622386 1588 ntTSL 5 BASIC4.85□□□□□ -1.63
COL2A1P02458 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC4.85□□□□□ -1.63
COL2A1P02458 NCOA4P2-201ENST00000340589 1813 ntBASIC4.85□□□□□ -1.63
COL2A1P02458 PDC-201ENST00000391997 1242 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
COL2A1P02458 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC4.85□□□□□ -1.63
COL2A1P02458 ZNF736P10Y-201ENST00000403990 1110 ntBASIC4.85□□□□□ -1.63
COL2A1P02458 RNU4-6P-201ENST00000410804 122 ntBASIC4.85□□□□□ -1.63
COL2A1P02458 FAM204CP-201ENST00000424489 642 ntBASIC4.85□□□□□ -1.63
COL2A1P02458 LINC01953-201ENST00000426870 717 ntTSL 5 BASIC4.85□□□□□ -1.63
COL2A1P02458 MTATP6P11-201ENST00000428071 670 ntBASIC4.85□□□□□ -1.63
COL2A1P02458 VN1R48P-201ENST00000448149 1036 ntBASIC4.85□□□□□ -1.63
COL2A1P02458 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC4.85□□□□□ -1.63
COL2A1P02458 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC4.85□□□□□ -1.63
COL2A1P02458 HPRT1P2-201ENST00000505250 544 ntBASIC4.85□□□□□ -1.63
COL2A1P02458 AC110768.1-201ENST00000509222 400 ntBASIC4.85□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 87.4 ms