Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 OR4A15-201ENST00000314706 1035 ntBASIC4.88□□□□□ -1.63
COL1A1P02452 DSCR8-201ENST00000357704 552 ntAPPRIS P5 TSL 2 BASIC4.88□□□□□ -1.63
COL1A1P02452 AL590704.1-201ENST00000402856 794 ntBASIC4.88□□□□□ -1.63
COL1A1P02452 SNORA57.3-201ENST00000411095 141 ntBASIC4.88□□□□□ -1.63
COL1A1P02452 LINC00161-201ENST00000412526 870 ntTSL 2 BASIC4.88□□□□□ -1.63
COL1A1P02452 PDSS1P1-201ENST00000422953 1114 ntBASIC4.88□□□□□ -1.63
COL1A1P02452 ST7-AS2-203ENST00000434993 918 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
COL1A1P02452 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC4.88□□□□□ -1.63
COL1A1P02452 snoU13.24-201ENST00000458998 104 ntBASIC4.88□□□□□ -1.63
COL1A1P02452 NECTIN3-AS1-202ENST00000467426 664 ntTSL 3 BASIC4.88□□□□□ -1.63
COL1A1P02452 AL139099.1-201ENST00000497398 403 ntBASIC4.88□□□□□ -1.63
COL1A1P02452 AC006499.6-201ENST00000511169 607 ntBASIC4.88□□□□□ -1.63
COL1A1P02452 RN7SKP141-201ENST00000516167 338 ntBASIC4.88□□□□□ -1.63
COL1A1P02452 AC087369.1-201ENST00000520775 996 ntBASIC4.88□□□□□ -1.63
COL1A1P02452 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC4.88□□□□□ -1.63
COL1A1P02452 GTF2IP22-201ENST00000554443 182 ntBASIC4.88□□□□□ -1.63
COL1A1P02452 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC4.88□□□□□ -1.63
COL1A1P02452 RPL23AP87-202ENST00000573039 466 ntBASIC4.88□□□□□ -1.63
COL1A1P02452 SMCR2_2.1-201ENST00000619783 161 ntBASIC4.88□□□□□ -1.63
COL1A1P02452 PACRG-211ENST00000621363 360 ntTSL 5 BASIC4.88□□□□□ -1.63
COL1A1P02452 AC091953.5-201ENST00000622919 233 ntBASIC4.88□□□□□ -1.63
COL1A1P02452 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC4.88□□□□□ -1.63
COL1A1P02452 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
COL1A1P02452 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
COL1A1P02452 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
COL1A1P02452 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
COL1A1P02452 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC4.88□□□□□ -1.63
COL1A1P02452 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
COL1A1P02452 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
COL1A1P02452 AC093591.2-201ENST00000565254 3843 ntBASIC4.88□□□□□ -1.63
COL1A1P02452 AC005261.2-201ENST00000593427 4258 ntBASIC4.88□□□□□ -1.63
COL1A1P02452 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
COL1A1P02452 GHR-211ENST00000618088 4491 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
COL1A1P02452 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC4.88□□□□□ -1.63
COL1A1P02452 U8.11-201ENST00000384699 133 ntBASIC4.88□□□□□ -1.63
COL1A1P02452 U8.12-201ENST00000384701 133 ntBASIC4.88□□□□□ -1.63
COL1A1P02452 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC4.88□□□□□ -1.63
COL1A1P02452 PGBD4P8-201ENST00000412993 562 ntBASIC4.88□□□□□ -1.63
COL1A1P02452 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
COL1A1P02452 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC4.88□□□□□ -1.63
COL1A1P02452 DYNLL1P7-201ENST00000429273 258 ntBASIC4.88□□□□□ -1.63
COL1A1P02452 KCNQ5-IT1-201ENST00000445310 563 ntTSL 2 BASIC4.88□□□□□ -1.63
COL1A1P02452 NANOGP10-201ENST00000453325 895 ntBASIC4.88□□□□□ -1.63
COL1A1P02452 U8.18-201ENST00000459285 133 ntBASIC4.88□□□□□ -1.63
COL1A1P02452 AC022336.1-201ENST00000475510 337 ntBASIC4.88□□□□□ -1.63
COL1A1P02452 GAPDHP36-201ENST00000480688 918 ntBASIC4.88□□□□□ -1.63
COL1A1P02452 AC026726.1-201ENST00000512859 601 ntBASIC4.88□□□□□ -1.63
COL1A1P02452 NDUFA5P2-201ENST00000519723 344 ntBASIC4.88□□□□□ -1.63
COL1A1P02452 SNHG14-221ENST00000554726 1116 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
COL1A1P02452 AC096553.1-201ENST00000605169 829 ntBASIC4.88□□□□□ -1.63
COL1A1P02452 FP236240.3-201ENST00000623061 327 ntBASIC4.88□□□□□ -1.63
COL1A1P02452 AC020978.9-201ENST00000624380 1141 ntBASIC4.88□□□□□ -1.63
COL1A1P02452 LINC00901-201ENST00000487512 1452 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
COL1A1P02452 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC4.87□□□□□ -1.63
COL1A1P02452 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC4.87□□□□□ -1.63
COL1A1P02452 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
COL1A1P02452 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC4.87□□□□□ -1.63
COL1A1P02452 AP000542.2-201ENST00000623199 6179 ntBASIC4.87□□□□□ -1.63
COL1A1P02452 RNU1-15P-201ENST00000353977 144 ntBASIC4.87□□□□□ -1.63
COL1A1P02452 RPL31-206ENST00000409650 770 ntAPPRIS ALT1 TSL 2 BASIC4.87□□□□□ -1.63
COL1A1P02452 LINC01857-201ENST00000429730 492 ntTSL 2 BASIC4.87□□□□□ -1.63
COL1A1P02452 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC4.87□□□□□ -1.63
COL1A1P02452 RPL23AP89-201ENST00000439324 255 ntBASIC4.87□□□□□ -1.63
COL1A1P02452 AC005358.1-201ENST00000445508 1143 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
COL1A1P02452 RPS20P21-201ENST00000466859 343 ntBASIC4.87□□□□□ -1.63
COL1A1P02452 ACTR3P3-201ENST00000480448 893 ntBASIC4.87□□□□□ -1.63
COL1A1P02452 SCARNA14-201ENST00000516903 136 ntBASIC4.87□□□□□ -1.63
COL1A1P02452 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC4.87□□□□□ -1.63
COL1A1P02452 AC079171.1-201ENST00000568788 914 ntBASIC4.87□□□□□ -1.63
COL1A1P02452 AC006363.1-201ENST00000603806 463 ntBASIC4.87□□□□□ -1.63
COL1A1P02452 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
COL1A1P02452 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
COL1A1P02452 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
COL1A1P02452 AC012314.7-201ENST00000619693 93 ntBASIC4.87□□□□□ -1.63
COL1A1P02452 SATB1-AS1-263ENST00000630022 622 ntTSL 5 BASIC4.87□□□□□ -1.63
COL1A1P02452 MAPK10-320ENST00000641462 6696 ntBASIC4.87□□□□□ -1.63
COL1A1P02452 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC4.87□□□□□ -1.63
COL1A1P02452 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC4.87□□□□□ -1.63
COL1A1P02452 NOX4-205ENST00000424319 4184 ntTSL 5 BASIC4.87□□□□□ -1.63
COL1A1P02452 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
COL1A1P02452 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
COL1A1P02452 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC4.86□□□□□ -1.63
COL1A1P02452 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC4.86□□□□□ -1.63
COL1A1P02452 HMGB3P19-201ENST00000403971 560 ntBASIC4.86□□□□□ -1.63
COL1A1P02452 HDGFP1-201ENST00000405943 252 ntBASIC4.86□□□□□ -1.63
COL1A1P02452 RN7SKP156-201ENST00000410308 342 ntBASIC4.86□□□□□ -1.63
COL1A1P02452 AC093578.1-201ENST00000415219 368 ntBASIC4.86□□□□□ -1.63
COL1A1P02452 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
COL1A1P02452 GCG-202ENST00000418842 1289 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
COL1A1P02452 LINC00626-201ENST00000420691 955 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
COL1A1P02452 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
COL1A1P02452 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC4.86□□□□□ -1.63
COL1A1P02452 MAPRE1P3-201ENST00000435438 796 ntBASIC4.86□□□□□ -1.63
COL1A1P02452 AL357507.1-201ENST00000435946 669 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
COL1A1P02452 RPL12P18-201ENST00000437175 325 ntBASIC4.86□□□□□ -1.63
COL1A1P02452 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
COL1A1P02452 GEMIN8P3-201ENST00000445417 720 ntBASIC4.86□□□□□ -1.63
COL1A1P02452 AC006499.5-201ENST00000505037 514 ntBASIC4.86□□□□□ -1.63
COL1A1P02452 AP000619.3-201ENST00000535634 1127 ntBASIC4.86□□□□□ -1.63
COL1A1P02452 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC4.86□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 117 ms