Protein–RNA interactions for Protein: O95025

SEMA3D, Semaphorin-3D, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3DO95025 AC007546.1-201ENST00000619452 559 ntBASIC4.14□□□□□ -1.75
SEMA3DO95025 SMCR2_2.1-201ENST00000619783 161 ntBASIC4.14□□□□□ -1.75
SEMA3DO95025 AC140479.6-201ENST00000633535 357 ntBASIC4.14□□□□□ -1.75
SEMA3DO95025 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
SEMA3DO95025 VIP-202ENST00000367244 1584 ntAPPRIS P4 TSL 1 (best) BASIC4.14□□□□□ -1.75
SEMA3DO95025 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
SEMA3DO95025 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
SEMA3DO95025 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
SEMA3DO95025 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
SEMA3DO95025 AL031985.3-201ENST00000565390 2449 ntBASIC4.13□□□□□ -1.75
SEMA3DO95025 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
SEMA3DO95025 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC4.13□□□□□ -1.75
SEMA3DO95025 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
SEMA3DO95025 DNAJC12-201ENST00000225171 1201 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
SEMA3DO95025 CAPZA3-201ENST00000317658 1087 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
SEMA3DO95025 OR6C74-201ENST00000343870 1105 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
SEMA3DO95025 RNA5SP332-201ENST00000391063 115 ntBASIC4.13□□□□□ -1.75
SEMA3DO95025 RPL23AP59-201ENST00000399415 461 ntBASIC4.13□□□□□ -1.75
SEMA3DO95025 AC097374.1-203ENST00000400783 485 ntBASIC4.13□□□□□ -1.75
SEMA3DO95025 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC4.13□□□□□ -1.75
SEMA3DO95025 RAB9AP4-201ENST00000415230 609 ntBASIC4.13□□□□□ -1.75
SEMA3DO95025 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC4.13□□□□□ -1.75
SEMA3DO95025 CNOT7P1-201ENST00000429006 852 ntBASIC4.13□□□□□ -1.75
SEMA3DO95025 TXNP2-201ENST00000443918 295 ntBASIC4.13□□□□□ -1.75
SEMA3DO95025 AC026320.1-202ENST00000444729 672 ntTSL 3 BASIC4.13□□□□□ -1.75
SEMA3DO95025 RN7SL98P-201ENST00000462271 300 ntBASIC4.13□□□□□ -1.75
SEMA3DO95025 RPL21P71-201ENST00000465598 459 ntBASIC4.13□□□□□ -1.75
SEMA3DO95025 RPL35AP15-201ENST00000468042 339 ntBASIC4.13□□□□□ -1.75
SEMA3DO95025 AC105918.1-201ENST00000474399 838 ntBASIC4.13□□□□□ -1.75
SEMA3DO95025 MTND6P6-201ENST00000478031 263 ntBASIC4.13□□□□□ -1.75
SEMA3DO95025 RN7SL810P-201ENST00000493031 276 ntBASIC4.13□□□□□ -1.75
SEMA3DO95025 AC010374.1-201ENST00000503762 1237 ntBASIC4.13□□□□□ -1.75
SEMA3DO95025 UBE2D3-217ENST00000504211 578 ntTSL 2 BASIC4.13□□□□□ -1.75
SEMA3DO95025 THAP6-209ENST00000507556 1134 ntTSL 2 BASIC4.13□□□□□ -1.75
SEMA3DO95025 MTCO3P42-201ENST00000509488 518 ntBASIC4.13□□□□□ -1.75
SEMA3DO95025 LINC01060-205ENST00000512839 716 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
SEMA3DO95025 MTCO3P39-201ENST00000514812 518 ntBASIC4.13□□□□□ -1.75
SEMA3DO95025 HNRNPKP5-201ENST00000515300 253 ntBASIC4.13□□□□□ -1.75
SEMA3DO95025 SNORD116-26-201ENST00000516006 96 ntBASIC4.13□□□□□ -1.75
SEMA3DO95025 AC246817.2-206ENST00000520570 582 ntTSL 4 BASIC4.13□□□□□ -1.75
SEMA3DO95025 IGLVVI-25-1-201ENST00000521893 249 ntBASIC4.13□□□□□ -1.75
SEMA3DO95025 OR8X1P-201ENST00000534542 869 ntBASIC4.13□□□□□ -1.75
SEMA3DO95025 AC007424.1-203ENST00000554613 687 ntBASIC4.13□□□□□ -1.75
SEMA3DO95025 CCDC178-208ENST00000579916 1017 ntAPPRIS ALT2 TSL 5 BASIC4.13□□□□□ -1.75
SEMA3DO95025 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC4.13□□□□□ -1.75
SEMA3DO95025 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC4.13□□□□□ -1.75
SEMA3DO95025 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC4.13□□□□□ -1.75
SEMA3DO95025 AC097376.2-202ENST00000608345 433 ntTSL 3 BASIC4.13□□□□□ -1.75
SEMA3DO95025 MIR4727-201ENST00000622232 55 ntBASIC4.13□□□□□ -1.75
SEMA3DO95025 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
SEMA3DO95025 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
SEMA3DO95025 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
SEMA3DO95025 AL137100.1-201ENST00000556703 1620 ntBASIC4.13□□□□□ -1.75
SEMA3DO95025 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
SEMA3DO95025 EED-203ENST00000351625 1696 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
SEMA3DO95025 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC4.13□□□□□ -1.75
SEMA3DO95025 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
SEMA3DO95025 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
SEMA3DO95025 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
SEMA3DO95025 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC4.12□□□□□ -1.75
SEMA3DO95025 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC4.12□□□□□ -1.75
SEMA3DO95025 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC4.12□□□□□ -1.75
SEMA3DO95025 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
SEMA3DO95025 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
SEMA3DO95025 AC007529.1-201ENST00000418574 2178 ntBASIC4.12□□□□□ -1.75
SEMA3DO95025 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
SEMA3DO95025 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
SEMA3DO95025 RNA5-8SP7-201ENST00000363443 155 ntBASIC4.12□□□□□ -1.75
SEMA3DO95025 SNORD66.1-201ENST00000391230 76 ntBASIC4.12□□□□□ -1.75
SEMA3DO95025 CYB5AP4-201ENST00000396692 399 ntBASIC4.12□□□□□ -1.75
SEMA3DO95025 LINC01423-201ENST00000414189 608 ntTSL 3 BASIC4.12□□□□□ -1.75
SEMA3DO95025 GNGT1-204ENST00000430875 628 ntTSL 2 BASIC4.12□□□□□ -1.75
SEMA3DO95025 HLA-N-201ENST00000437516 135 ntBASIC4.12□□□□□ -1.75
SEMA3DO95025 ATP6V0E1P2-201ENST00000441771 245 ntBASIC4.12□□□□□ -1.75
SEMA3DO95025 AL512326.1-201ENST00000443050 721 ntBASIC4.12□□□□□ -1.75
SEMA3DO95025 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC4.12□□□□□ -1.75
SEMA3DO95025 OR6C72P-201ENST00000451403 892 ntBASIC4.12□□□□□ -1.75
SEMA3DO95025 C2orf80-207ENST00000453017 722 ntTSL 3 BASIC4.12□□□□□ -1.75
SEMA3DO95025 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC4.12□□□□□ -1.75
SEMA3DO95025 AL133477.1-201ENST00000457472 514 ntBASIC4.12□□□□□ -1.75
SEMA3DO95025 MTND2P28-201ENST00000457540 1044 ntBASIC4.12□□□□□ -1.75
SEMA3DO95025 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC4.12□□□□□ -1.75
SEMA3DO95025 AC007686.1-201ENST00000488511 463 ntBASIC4.12□□□□□ -1.75
SEMA3DO95025 AC104164.2-201ENST00000496953 495 ntBASIC4.12□□□□□ -1.75
SEMA3DO95025 AC139783.2-201ENST00000504847 1145 ntBASIC4.12□□□□□ -1.75
SEMA3DO95025 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC4.12□□□□□ -1.75
SEMA3DO95025 AC006499.6-201ENST00000511169 607 ntBASIC4.12□□□□□ -1.75
SEMA3DO95025 AC012613.1-201ENST00000522685 387 ntTSL 2 BASIC4.12□□□□□ -1.75
SEMA3DO95025 OR5AN2P-201ENST00000534535 896 ntBASIC4.12□□□□□ -1.75
SEMA3DO95025 AC006064.5-201ENST00000541782 248 ntBASIC4.12□□□□□ -1.75
SEMA3DO95025 AL109766.1-201ENST00000555080 552 ntBASIC4.12□□□□□ -1.75
SEMA3DO95025 AC109462.2-201ENST00000558730 763 ntTSL 3 BASIC4.12□□□□□ -1.75
SEMA3DO95025 LINC02131-201ENST00000563289 419 ntTSL 2 BASIC4.12□□□□□ -1.75
SEMA3DO95025 AC007014.1-201ENST00000572828 610 ntTSL 3 BASIC4.12□□□□□ -1.75
SEMA3DO95025 AC005191.1-201ENST00000603950 358 ntBASIC4.12□□□□□ -1.75
SEMA3DO95025 AC010680.3-201ENST00000604215 520 ntBASIC4.12□□□□□ -1.75
SEMA3DO95025 LRRC2-AS1-202ENST00000614743 633 ntTSL 3 BASIC4.12□□□□□ -1.75
SEMA3DO95025 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC4.12□□□□□ -1.75
SEMA3DO95025 AL390964.1-201ENST00000622486 845 ntTSL 3 BASIC4.12□□□□□ -1.75
SEMA3DO95025 AC000123.2-201ENST00000623124 461 ntBASIC4.12□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 129.9 ms