Protein–RNA interactions for Protein: O60493

SNX3, Sorting nexin-3, humanhuman

Predictions only

Length 162 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3O60493 RPEP2-201ENST00000432149 701 ntBASIC4.42□□□□□ -1.7
SNX3O60493 HSFY7P-201ENST00000432672 318 ntBASIC4.42□□□□□ -1.7
SNX3O60493 LINC01078-201ENST00000434832 387 ntTSL 5 BASIC4.42□□□□□ -1.7
SNX3O60493 OR52B5P-201ENST00000435337 951 ntBASIC4.42□□□□□ -1.7
SNX3O60493 RPL23AP19-201ENST00000436229 369 ntBASIC4.42□□□□□ -1.7
SNX3O60493 HSFY8P-201ENST00000437934 318 ntBASIC4.42□□□□□ -1.7
SNX3O60493 ELOCP10-201ENST00000440624 327 ntBASIC4.42□□□□□ -1.7
SNX3O60493 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC4.42□□□□□ -1.7
SNX3O60493 AC002553.2-201ENST00000453217 340 ntBASIC4.42□□□□□ -1.7
SNX3O60493 AL354710.1-201ENST00000453641 246 ntBASIC4.42□□□□□ -1.7
SNX3O60493 HSFY5P-201ENST00000453726 309 ntBASIC4.42□□□□□ -1.7
SNX3O60493 RPL21P18-201ENST00000469899 480 ntBASIC4.42□□□□□ -1.7
SNX3O60493 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC4.42□□□□□ -1.7
SNX3O60493 AC018816.1-205ENST00000489771 509 ntTSL 2 BASIC4.42□□□□□ -1.7
SNX3O60493 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
SNX3O60493 AC025554.1-201ENST00000505641 188 ntBASIC4.42□□□□□ -1.7
SNX3O60493 AC017037.1-201ENST00000508460 471 ntBASIC4.42□□□□□ -1.7
SNX3O60493 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC4.42□□□□□ -1.7
SNX3O60493 C8orf22-204ENST00000522267 739 ntAPPRIS ALT1 TSL 2 BASIC4.42□□□□□ -1.7
SNX3O60493 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC4.42□□□□□ -1.7
SNX3O60493 AP003386.1-201ENST00000526509 504 ntTSL 3 BASIC4.42□□□□□ -1.7
SNX3O60493 AP003557.1-202ENST00000528978 562 ntTSL 4 BASIC4.42□□□□□ -1.7
SNX3O60493 AC134775.1-201ENST00000531268 464 ntTSL 2 BASIC4.42□□□□□ -1.7
SNX3O60493 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC4.42□□□□□ -1.7
SNX3O60493 POLR2KP1-201ENST00000553226 168 ntBASIC4.42□□□□□ -1.7
SNX3O60493 AC009396.1-201ENST00000553628 1079 ntTSL 2 BASIC4.42□□□□□ -1.7
SNX3O60493 AL121594.4-201ENST00000556211 1196 ntBASIC4.42□□□□□ -1.7
SNX3O60493 LINC02170-201ENST00000561519 555 ntTSL 4 BASIC4.42□□□□□ -1.7
SNX3O60493 LINC01900-202ENST00000584898 603 ntTSL 5 BASIC4.42□□□□□ -1.7
SNX3O60493 RN7SL622P-201ENST00000585292 275 ntBASIC4.42□□□□□ -1.7
SNX3O60493 AC068620.3-201ENST00000602749 560 ntBASIC4.42□□□□□ -1.7
SNX3O60493 ELOCP34-201ENST00000604436 327 ntBASIC4.42□□□□□ -1.7
SNX3O60493 Z98200.1-201ENST00000607298 470 ntBASIC4.42□□□□□ -1.7
SNX3O60493 FAM27B-201ENST00000610601 213 ntBASIC4.42□□□□□ -1.7
SNX3O60493 AC139769.3-201ENST00000618383 175 ntBASIC4.42□□□□□ -1.7
SNX3O60493 AC073569.3-201ENST00000619055 682 ntBASIC4.42□□□□□ -1.7
SNX3O60493 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC4.42□□□□□ -1.7
SNX3O60493 AL359742.1-201ENST00000622497 540 ntBASIC4.42□□□□□ -1.7
SNX3O60493 AC019278.1-201ENST00000623516 479 ntBASIC4.42□□□□□ -1.7
SNX3O60493 AC093875.1-201ENST00000623688 504 ntBASIC4.42□□□□□ -1.7
SNX3O60493 TEX41-254ENST00000626394 423 ntTSL 5 BASIC4.42□□□□□ -1.7
SNX3O60493 MIR1910-201ENST00000636955 80 ntBASIC4.42□□□□□ -1.7
SNX3O60493 AC134980.1-208ENST00000640228 535 ntTSL 5 BASIC4.42□□□□□ -1.7
SNX3O60493 OR52B5P-202ENST00000641118 1110 ntBASIC4.42□□□□□ -1.7
SNX3O60493 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
SNX3O60493 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
SNX3O60493 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
SNX3O60493 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC4.42□□□□□ -1.7
SNX3O60493 AADACL2-201ENST00000356517 1487 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
SNX3O60493 POPDC3-201ENST00000254765 1345 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
SNX3O60493 CCDC178-202ENST00000383096 3391 ntAPPRIS ALT2 TSL 5 BASIC4.42□□□□□ -1.7
SNX3O60493 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC4.42□□□□□ -1.7
SNX3O60493 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC4.42□□□□□ -1.7
SNX3O60493 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC4.42□□□□□ -1.7
SNX3O60493 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
SNX3O60493 AC083899.2-201ENST00000423285 1376 ntBASIC4.41□□□□□ -1.7
SNX3O60493 MGAT4A-203ENST00000409391 2018 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
SNX3O60493 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC4.41□□□□□ -1.7
SNX3O60493 NOL8P1-201ENST00000508336 3529 ntBASIC4.41□□□□□ -1.7
SNX3O60493 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC4.41□□□□□ -1.7
SNX3O60493 OR52B1P-201ENST00000316506 909 ntBASIC4.41□□□□□ -1.7
SNX3O60493 RNU6-543P-201ENST00000362576 108 ntBASIC4.41□□□□□ -1.7
SNX3O60493 TRGV8-201ENST00000390343 468 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
SNX3O60493 AC233289.1-201ENST00000403700 508 ntBASIC4.41□□□□□ -1.7
SNX3O60493 AL359636.2-201ENST00000412262 259 ntTSL 3 BASIC4.41□□□□□ -1.7
SNX3O60493 AL024507.1-201ENST00000412741 274 ntBASIC4.41□□□□□ -1.7
SNX3O60493 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC4.41□□□□□ -1.7
SNX3O60493 MTND4P11-201ENST00000417020 1058 ntBASIC4.41□□□□□ -1.7
SNX3O60493 AC013410.2-201ENST00000422627 201 ntBASIC4.41□□□□□ -1.7
SNX3O60493 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC4.41□□□□□ -1.7
SNX3O60493 SEC63P1-201ENST00000425785 1258 ntBASIC4.41□□□□□ -1.7
SNX3O60493 AC013262.1-201ENST00000426710 252 ntBASIC4.41□□□□□ -1.7
SNX3O60493 DEFB130D-201ENST00000426866 237 ntBASIC4.41□□□□□ -1.7
SNX3O60493 AC007403.1-201ENST00000427579 567 ntTSL 4 BASIC4.41□□□□□ -1.7
SNX3O60493 AC093422.3-201ENST00000428506 305 ntBASIC4.41□□□□□ -1.7
SNX3O60493 CBX1P4-201ENST00000439415 457 ntBASIC4.41□□□□□ -1.7
SNX3O60493 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC4.41□□□□□ -1.7
SNX3O60493 AC099063.2-201ENST00000446360 662 ntBASIC4.41□□□□□ -1.7
SNX3O60493 CASP12-207ENST00000447913 819 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
SNX3O60493 CASP12-208ENST00000448103 1071 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
SNX3O60493 VN1R32P-201ENST00000452234 905 ntBASIC4.41□□□□□ -1.7
SNX3O60493 AL606490.1-201ENST00000452266 765 ntBASIC4.41□□□□□ -1.7
SNX3O60493 AL160408.1-203ENST00000453568 631 ntTSL 5 BASIC4.41□□□□□ -1.7
SNX3O60493 AL389915.2-201ENST00000454576 441 ntBASIC4.41□□□□□ -1.7
SNX3O60493 AC010884.1-201ENST00000456519 642 ntTSL 3 BASIC4.41□□□□□ -1.7
SNX3O60493 RN7SL585P-201ENST00000470538 280 ntBASIC4.41□□□□□ -1.7
SNX3O60493 AC010374.1-201ENST00000503762 1237 ntBASIC4.41□□□□□ -1.7
SNX3O60493 AC090673.1-204ENST00000504038 977 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
SNX3O60493 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC4.41□□□□□ -1.7
SNX3O60493 AC093331.2-201ENST00000520459 677 ntTSL 3 BASIC4.41□□□□□ -1.7
SNX3O60493 AP003066.2-201ENST00000529375 555 ntBASIC4.41□□□□□ -1.7
SNX3O60493 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC4.41□□□□□ -1.7
SNX3O60493 AC090680.2-201ENST00000550279 742 ntTSL 3 BASIC4.41□□□□□ -1.7
SNX3O60493 AL360157.1-201ENST00000565962 87 ntBASIC4.41□□□□□ -1.7
SNX3O60493 AC122134.1-202ENST00000569111 1201 ntBASIC4.41□□□□□ -1.7
SNX3O60493 TTN-AS1-217ENST00000585625 945 ntTSL 5 BASIC4.41□□□□□ -1.7
SNX3O60493 AC005537.1-201ENST00000588324 1238 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
SNX3O60493 AC010200.2-201ENST00000605098 235 ntBASIC4.41□□□□□ -1.7
SNX3O60493 AL391358.1-201ENST00000605342 190 ntBASIC4.41□□□□□ -1.7
SNX3O60493 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC4.41□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 119.9 ms