Protein–RNA interactions for Protein: O43679

LDB2, LIM domain-binding protein 2, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB2O43679 AC119751.3-201ENST00000399720 670 ntBASIC4.8□□□□□ -1.64
LDB2O43679 MTND4P13-201ENST00000402078 1023 ntBASIC4.8□□□□□ -1.64
LDB2O43679 GLS-204ENST00000409428 816 ntTSL 2 BASIC4.8□□□□□ -1.64
LDB2O43679 RNU4-22P-201ENST00000411058 166 ntBASIC4.8□□□□□ -1.64
LDB2O43679 COX6B1P1-201ENST00000415962 213 ntBASIC4.8□□□□□ -1.64
LDB2O43679 LINC00845-201ENST00000417931 696 ntTSL 2 BASIC4.8□□□□□ -1.64
LDB2O43679 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC4.8□□□□□ -1.64
LDB2O43679 MTCO3P4-201ENST00000419236 787 ntBASIC4.8□□□□□ -1.64
LDB2O43679 RPL36AP10-201ENST00000421785 322 ntBASIC4.8□□□□□ -1.64
LDB2O43679 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC4.8□□□□□ -1.64
LDB2O43679 AL360081.1-201ENST00000428299 555 ntBASIC4.8□□□□□ -1.64
LDB2O43679 AC007559.1-201ENST00000428736 355 ntBASIC4.8□□□□□ -1.64
LDB2O43679 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC4.8□□□□□ -1.64
LDB2O43679 AC004938.1-201ENST00000438468 308 ntBASIC4.8□□□□□ -1.64
LDB2O43679 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC4.8□□□□□ -1.64
LDB2O43679 MRPL48P1-201ENST00000445390 636 ntBASIC4.8□□□□□ -1.64
LDB2O43679 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC4.8□□□□□ -1.64
LDB2O43679 AC004022.1-201ENST00000447766 1066 ntBASIC4.8□□□□□ -1.64
LDB2O43679 AC010733.1-201ENST00000451515 401 ntBASIC4.8□□□□□ -1.64
LDB2O43679 FO393415.3-201ENST00000456424 375 ntTSL 3 BASIC4.8□□□□□ -1.64
LDB2O43679 AC004263.1-201ENST00000479327 332 ntBASIC4.8□□□□□ -1.64
LDB2O43679 RPL7P16-201ENST00000479738 738 ntBASIC4.8□□□□□ -1.64
LDB2O43679 AC108748.1-201ENST00000487772 515 ntTSL 3 BASIC4.8□□□□□ -1.64
LDB2O43679 F11-AS1-201ENST00000505103 1178 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
LDB2O43679 MTHFD2P4-201ENST00000515074 1025 ntBASIC4.8□□□□□ -1.64
LDB2O43679 AC106895.1-201ENST00000515825 548 ntTSL 4 BASIC4.8□□□□□ -1.64
LDB2O43679 RRAS2-205ENST00000529237 1278 ntTSL 2 BASIC4.8□□□□□ -1.64
LDB2O43679 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC4.8□□□□□ -1.64
LDB2O43679 AP002765.2-201ENST00000532961 666 ntTSL 3 BASIC4.8□□□□□ -1.64
LDB2O43679 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC4.8□□□□□ -1.64
LDB2O43679 AC145350.1-201ENST00000567426 208 ntBASIC4.8□□□□□ -1.64
LDB2O43679 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC4.8□□□□□ -1.64
LDB2O43679 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC4.8□□□□□ -1.64
LDB2O43679 AC115522.1-201ENST00000595680 556 ntTSL 4 BASIC4.8□□□□□ -1.64
LDB2O43679 AL049844.2-201ENST00000604280 628 ntBASIC4.8□□□□□ -1.64
LDB2O43679 MIR6820-201ENST00000611508 62 ntBASIC4.8□□□□□ -1.64
LDB2O43679 AC011815.3-201ENST00000624194 473 ntBASIC4.8□□□□□ -1.64
LDB2O43679 GMFB-210ENST00000628554 639 ntTSL 4 BASIC4.8□□□□□ -1.64
LDB2O43679 AC245427.3-201ENST00000632041 51 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
LDB2O43679 LINC01361-202ENST00000452834 1526 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
LDB2O43679 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
LDB2O43679 AL606537.1-201ENST00000607258 2011 ntBASIC4.8□□□□□ -1.64
LDB2O43679 NCLP2-201ENST00000416078 1462 ntBASIC4.8□□□□□ -1.64
LDB2O43679 VN2R3P-201ENST00000422626 1412 ntBASIC4.8□□□□□ -1.64
LDB2O43679 BMPR1B-202ENST00000394931 1922 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
LDB2O43679 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
LDB2O43679 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC4.8□□□□□ -1.64
LDB2O43679 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC4.79□□□□□ -1.64
LDB2O43679 TRIM77-201ENST00000398290 1353 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
LDB2O43679 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
LDB2O43679 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
LDB2O43679 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC4.79□□□□□ -1.64
LDB2O43679 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC4.79□□□□□ -1.64
LDB2O43679 CLEC4A-201ENST00000229332 1281 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
LDB2O43679 GNAS-202ENST00000306090 477 ntTSL 5 BASIC4.79□□□□□ -1.64
LDB2O43679 PSG11-201ENST00000306322 990 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
LDB2O43679 ANKRD36P1-201ENST00000344424 659 ntBASIC4.79□□□□□ -1.64
LDB2O43679 RNA5SP443-201ENST00000363083 132 ntBASIC4.79□□□□□ -1.64
LDB2O43679 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
LDB2O43679 Y_RNA.578-201ENST00000390903 88 ntBASIC4.79□□□□□ -1.64
LDB2O43679 DNAJC19P6-201ENST00000401853 280 ntBASIC4.79□□□□□ -1.64
LDB2O43679 AL049545.1-201ENST00000401856 572 ntBASIC4.79□□□□□ -1.64
LDB2O43679 AL592291.1-201ENST00000403830 352 ntBASIC4.79□□□□□ -1.64
LDB2O43679 AP000580.1-201ENST00000404439 358 ntBASIC4.79□□□□□ -1.64
LDB2O43679 Y_RNA.625-201ENST00000411256 107 ntBASIC4.79□□□□□ -1.64
LDB2O43679 RPL7P57-201ENST00000423238 740 ntBASIC4.79□□□□□ -1.64
LDB2O43679 AL391832.1-201ENST00000423963 423 ntTSL 5 BASIC4.79□□□□□ -1.64
LDB2O43679 NMNAT1P2-201ENST00000435192 860 ntBASIC4.79□□□□□ -1.64
LDB2O43679 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC4.79□□□□□ -1.64
LDB2O43679 RPL7P32-201ENST00000457119 744 ntBASIC4.79□□□□□ -1.64
LDB2O43679 AC107015.1-201ENST00000466902 747 ntBASIC4.79□□□□□ -1.64
LDB2O43679 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC4.79□□□□□ -1.64
LDB2O43679 AC023050.1-201ENST00000498198 304 ntBASIC4.79□□□□□ -1.64
LDB2O43679 LINC02215-201ENST00000503320 543 ntTSL 4 BASIC4.79□□□□□ -1.64
LDB2O43679 LINC02224-201ENST00000505706 584 ntTSL 4 BASIC4.79□□□□□ -1.64
LDB2O43679 AC104119.1-201ENST00000508829 339 ntTSL 5 BASIC4.79□□□□□ -1.64
LDB2O43679 RNA5SP228-201ENST00000516232 133 ntBASIC4.79□□□□□ -1.64
LDB2O43679 LINC00944-202ENST00000540684 888 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
LDB2O43679 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC4.79□□□□□ -1.64
LDB2O43679 LINC02404-201ENST00000546710 1188 ntTSL 5 BASIC4.79□□□□□ -1.64
LDB2O43679 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC4.79□□□□□ -1.64
LDB2O43679 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC4.79□□□□□ -1.64
LDB2O43679 AC009117.1-201ENST00000563948 554 ntBASIC4.79□□□□□ -1.64
LDB2O43679 AL132657.2-201ENST00000564417 358 ntBASIC4.79□□□□□ -1.64
LDB2O43679 AC015878.1-201ENST00000584611 679 ntTSL 3 BASIC4.79□□□□□ -1.64
LDB2O43679 AC006272.2-201ENST00000594725 163 ntBASIC4.79□□□□□ -1.64
LDB2O43679 PCNAP1-202ENST00000595299 752 ntBASIC4.79□□□□□ -1.64
LDB2O43679 AC007193.1-201ENST00000599645 448 ntTSL 5 BASIC4.79□□□□□ -1.64
LDB2O43679 AC104785.1-201ENST00000603220 588 ntBASIC4.79□□□□□ -1.64
LDB2O43679 AC025588.2-201ENST00000604851 466 ntBASIC4.79□□□□□ -1.64
LDB2O43679 AC092954.1-201ENST00000609121 445 ntBASIC4.79□□□□□ -1.64
LDB2O43679 AC096586.1-201ENST00000610267 561 ntBASIC4.79□□□□□ -1.64
LDB2O43679 FAM27B-201ENST00000610601 213 ntBASIC4.79□□□□□ -1.64
LDB2O43679 MIR8069-1-201ENST00000616627 86 ntBASIC4.79□□□□□ -1.64
LDB2O43679 MIR8069-2-201ENST00000621412 86 ntBASIC4.79□□□□□ -1.64
LDB2O43679 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC4.79□□□□□ -1.64
LDB2O43679 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC4.79□□□□□ -1.64
LDB2O43679 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
LDB2O43679 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
LDB2O43679 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC4.79□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 125.9 ms