Protein–RNA interactions for Protein: O00560

SDCBP, Syntenin-1, humanhuman

Predicted RBP Predictions only

Length 298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPO00560 MIR4330-201ENST00000579077 105 ntBASIC3.46□□□□□ -1.86
SDCBPO00560 AC007448.1-201ENST00000582714 234 ntBASIC3.46□□□□□ -1.86
SDCBPO00560 MAPKAPK5-AS1-205ENST00000590479 543 ntTSL 2 BASIC3.46□□□□□ -1.86
SDCBPO00560 AC020914.4-201ENST00000597690 277 ntBASIC3.46□□□□□ -1.86
SDCBPO00560 FAM27D1-201ENST00000612308 341 ntBASIC3.46□□□□□ -1.86
SDCBPO00560 AL137078.2-201ENST00000615740 318 ntTSL 5 BASIC3.46□□□□□ -1.86
SDCBPO00560 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC3.46□□□□□ -1.86
SDCBPO00560 AC017007.4-201ENST00000503353 1352 ntBASIC3.46□□□□□ -1.86
SDCBPO00560 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC3.46□□□□□ -1.86
SDCBPO00560 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
SDCBPO00560 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
SDCBPO00560 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
SDCBPO00560 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
SDCBPO00560 USP50-205ENST00000616326 1419 ntAPPRIS ALT2 TSL 5 BASIC3.45□□□□□ -1.86
SDCBPO00560 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
SDCBPO00560 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC3.45□□□□□ -1.86
SDCBPO00560 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
SDCBPO00560 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
SDCBPO00560 OR4K17-201ENST00000315543 1032 ntBASIC3.45□□□□□ -1.86
SDCBPO00560 GKN2-201ENST00000328895 800 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
SDCBPO00560 SPRR2E-202ENST00000368751 692 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
SDCBPO00560 RNU1-89P-201ENST00000384592 164 ntBASIC3.45□□□□□ -1.86
SDCBPO00560 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC3.45□□□□□ -1.86
SDCBPO00560 RN7SKP56-201ENST00000410513 331 ntBASIC3.45□□□□□ -1.86
SDCBPO00560 RNU4-25P-201ENST00000410569 230 ntBASIC3.45□□□□□ -1.86
SDCBPO00560 RPL12P34-201ENST00000424532 479 ntBASIC3.45□□□□□ -1.86
SDCBPO00560 AC106901.1-201ENST00000425086 698 ntBASIC3.45□□□□□ -1.86
SDCBPO00560 AL590666.1-201ENST00000428641 433 ntTSL 2 BASIC3.45□□□□□ -1.86
SDCBPO00560 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC3.45□□□□□ -1.86
SDCBPO00560 AF228730.2-201ENST00000438784 848 ntBASIC3.45□□□□□ -1.86
SDCBPO00560 ACTR3P2-201ENST00000439585 1257 ntBASIC3.45□□□□□ -1.86
SDCBPO00560 CBX1P1-201ENST00000440184 427 ntBASIC3.45□□□□□ -1.86
SDCBPO00560 AL121718.1-201ENST00000449463 387 ntTSL 3 BASIC3.45□□□□□ -1.86
SDCBPO00560 RPS29P33-201ENST00000456717 146 ntBASIC3.45□□□□□ -1.86
SDCBPO00560 AC011276.1-201ENST00000469688 323 ntBASIC3.45□□□□□ -1.86
SDCBPO00560 AC109327.1-201ENST00000471666 403 ntBASIC3.45□□□□□ -1.86
SDCBPO00560 UBA52P3-201ENST00000491303 382 ntBASIC3.45□□□□□ -1.86
SDCBPO00560 AC021192.1-201ENST00000510169 791 ntTSL 3 BASIC3.45□□□□□ -1.86
SDCBPO00560 AC010342.1-201ENST00000514047 877 ntBASIC3.45□□□□□ -1.86
SDCBPO00560 IGLVIV-53-201ENST00000520107 367 ntBASIC3.45□□□□□ -1.86
SDCBPO00560 LINC01609-202ENST00000522778 566 ntTSL 2 BASIC3.45□□□□□ -1.86
SDCBPO00560 TRAV8-5-201ENST00000537369 341 ntBASIC3.45□□□□□ -1.86
SDCBPO00560 SNHG14-221ENST00000554726 1116 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
SDCBPO00560 AC068831.4-201ENST00000556118 109 ntBASIC3.45□□□□□ -1.86
SDCBPO00560 GS1-279B7.1-203ENST00000565520 609 ntTSL 5 BASIC3.45□□□□□ -1.86
SDCBPO00560 MIR4443-201ENST00000585052 53 ntBASIC3.45□□□□□ -1.86
SDCBPO00560 AC008752.1-201ENST00000590046 408 ntTSL 3 BASIC3.45□□□□□ -1.86
SDCBPO00560 AL356218.2-201ENST00000605264 187 ntBASIC3.45□□□□□ -1.86
SDCBPO00560 HMGB1P50-201ENST00000605814 607 ntBASIC3.45□□□□□ -1.86
SDCBPO00560 AP003392.5-201ENST00000607857 415 ntBASIC3.45□□□□□ -1.86
SDCBPO00560 Metazoa_SRP.111-201ENST00000614073 259 ntBASIC3.45□□□□□ -1.86
SDCBPO00560 AP005264.7-201ENST00000625003 745 ntBASIC3.45□□□□□ -1.86
SDCBPO00560 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
SDCBPO00560 AC083899.2-201ENST00000423285 1376 ntBASIC3.45□□□□□ -1.86
SDCBPO00560 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC3.45□□□□□ -1.86
SDCBPO00560 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
SDCBPO00560 AP001486.2-201ENST00000561652 5113 ntBASIC3.45□□□□□ -1.86
SDCBPO00560 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC3.45□□□□□ -1.86
SDCBPO00560 ZC3H14-205ENST00000393514 2195 ntTSL 5 BASIC3.45□□□□□ -1.86
SDCBPO00560 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
SDCBPO00560 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC3.45□□□□□ -1.86
SDCBPO00560 IQCH-214ENST00000629425 1822 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
SDCBPO00560 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC3.44□□□□□ -1.86
SDCBPO00560 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
SDCBPO00560 NOL8P1-201ENST00000508336 3529 ntBASIC3.44□□□□□ -1.86
SDCBPO00560 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
SDCBPO00560 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC3.44□□□□□ -1.86
SDCBPO00560 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC3.44□□□□□ -1.86
SDCBPO00560 BDP1P-201ENST00000582658 1990 ntBASIC3.44□□□□□ -1.86
SDCBPO00560 HSPA8P17-201ENST00000427029 1382 ntBASIC3.44□□□□□ -1.86
SDCBPO00560 DSCR8-201ENST00000357704 552 ntAPPRIS P5 TSL 2 BASIC3.44□□□□□ -1.86
SDCBPO00560 RNA5SP509-201ENST00000364577 119 ntBASIC3.44□□□□□ -1.86
SDCBPO00560 PMS1-202ENST00000374826 948 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
SDCBPO00560 DSCR8-202ENST00000400477 534 ntAPPRIS ALT2 TSL 1 (best) BASIC3.44□□□□□ -1.86
SDCBPO00560 RPL26P29-201ENST00000415623 438 ntBASIC3.44□□□□□ -1.86
SDCBPO00560 RPS27AP7-201ENST00000422792 455 ntBASIC3.44□□□□□ -1.86
SDCBPO00560 LBX1-AS1-202ENST00000434878 418 ntTSL 5 BASIC3.44□□□□□ -1.86
SDCBPO00560 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC3.44□□□□□ -1.86
SDCBPO00560 NUDT7-202ENST00000437314 930 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
SDCBPO00560 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC3.44□□□□□ -1.86
SDCBPO00560 AC026320.1-202ENST00000444729 672 ntTSL 3 BASIC3.44□□□□□ -1.86
SDCBPO00560 UBE2V2P4-201ENST00000447495 259 ntBASIC3.44□□□□□ -1.86
SDCBPO00560 AC009963.2-201ENST00000453431 138 ntBASIC3.44□□□□□ -1.86
SDCBPO00560 RPL36AP13-201ENST00000457490 317 ntBASIC3.44□□□□□ -1.86
SDCBPO00560 AC117513.1-201ENST00000462792 766 ntTSL 2 BASIC3.44□□□□□ -1.86
SDCBPO00560 RPS23P1-201ENST00000491662 432 ntBASIC3.44□□□□□ -1.86
SDCBPO00560 AC093824.1-201ENST00000508796 343 ntBASIC3.44□□□□□ -1.86
SDCBPO00560 NDUFB4P12-201ENST00000513465 390 ntBASIC3.44□□□□□ -1.86
SDCBPO00560 RNA5SP143-201ENST00000516936 115 ntBASIC3.44□□□□□ -1.86
SDCBPO00560 AC068672.2-201ENST00000524022 336 ntTSL 3 BASIC3.44□□□□□ -1.86
SDCBPO00560 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC3.44□□□□□ -1.86
SDCBPO00560 AC105233.3-201ENST00000531125 744 ntBASIC3.44□□□□□ -1.86
SDCBPO00560 CR383656.6-201ENST00000550518 394 ntBASIC3.44□□□□□ -1.86
SDCBPO00560 AC012417.1-201ENST00000582307 1039 ntBASIC3.44□□□□□ -1.86
SDCBPO00560 TTN-AS1-232ENST00000589487 1077 ntTSL 5 BASIC3.44□□□□□ -1.86
SDCBPO00560 AL157938.2-204ENST00000589667 826 ntTSL 5 BASIC3.44□□□□□ -1.86
SDCBPO00560 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC3.44□□□□□ -1.86
SDCBPO00560 AL451044.1-201ENST00000604867 238 ntBASIC3.44□□□□□ -1.86
SDCBPO00560 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC3.44□□□□□ -1.86
SDCBPO00560 AC107027.3-201ENST00000565095 3473 ntBASIC3.44□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 81.4 ms