Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 LDHA-225ENST00000625635 141 ntTSL 5 BASIC4.36□□□□□ -1.71
PDLIM1O00151 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
PDLIM1O00151 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
PDLIM1O00151 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC4.36□□□□□ -1.71
PDLIM1O00151 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC4.36□□□□□ -1.71
PDLIM1O00151 CD86-203ENST00000393627 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
PDLIM1O00151 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
PDLIM1O00151 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC4.36□□□□□ -1.71
PDLIM1O00151 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
PDLIM1O00151 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
PDLIM1O00151 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
PDLIM1O00151 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC4.35□□□□□ -1.71
PDLIM1O00151 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
PDLIM1O00151 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
PDLIM1O00151 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
PDLIM1O00151 EXOC5P1-201ENST00000510543 1969 ntBASIC4.35□□□□□ -1.71
PDLIM1O00151 SPATA2P1-201ENST00000431223 2055 ntBASIC4.35□□□□□ -1.71
PDLIM1O00151 MGST1-201ENST00000010404 901 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
PDLIM1O00151 OR5AS1-201ENST00000313555 975 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
PDLIM1O00151 AC067945.1-201ENST00000342609 618 ntBASIC4.35□□□□□ -1.71
PDLIM1O00151 ARV1-202ENST00000366658 1170 ntTSL 5 BASIC4.35□□□□□ -1.71
PDLIM1O00151 SAMD13-202ENST00000370669 856 ntAPPRIS P1 TSL 3 BASIC4.35□□□□□ -1.71
PDLIM1O00151 MGST1-203ENST00000396207 909 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
PDLIM1O00151 KCNJ13-203ENST00000410029 1177 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
PDLIM1O00151 RN7SKP56-201ENST00000410513 331 ntBASIC4.35□□□□□ -1.71
PDLIM1O00151 RBMS3-AS1-201ENST00000414547 554 ntTSL 4 BASIC4.35□□□□□ -1.71
PDLIM1O00151 COX6B1P1-201ENST00000415962 213 ntBASIC4.35□□□□□ -1.71
PDLIM1O00151 AC108681.1-202ENST00000417384 589 ntTSL 4 BASIC4.35□□□□□ -1.71
PDLIM1O00151 AL645608.4-201ENST00000423619 154 ntBASIC4.35□□□□□ -1.71
PDLIM1O00151 RPL21P91-201ENST00000429231 479 ntBASIC4.35□□□□□ -1.71
PDLIM1O00151 AC092013.1-201ENST00000438795 332 ntBASIC4.35□□□□□ -1.71
PDLIM1O00151 AC068491.2-201ENST00000438897 617 ntTSL 2 BASIC4.35□□□□□ -1.71
PDLIM1O00151 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC4.35□□□□□ -1.71
PDLIM1O00151 MTCYBP12-201ENST00000440559 1134 ntBASIC4.35□□□□□ -1.71
PDLIM1O00151 SUMO2P1-206ENST00000445436 284 ntBASIC4.35□□□□□ -1.71
PDLIM1O00151 AL157827.1-201ENST00000447622 132 ntBASIC4.35□□□□□ -1.71
PDLIM1O00151 AL512380.1-202ENST00000447728 543 ntTSL 5 BASIC4.35□□□□□ -1.71
PDLIM1O00151 NECTIN3-AS1-202ENST00000467426 664 ntTSL 3 BASIC4.35□□□□□ -1.71
PDLIM1O00151 CDH12P2-201ENST00000504393 298 ntBASIC4.35□□□□□ -1.71
PDLIM1O00151 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC4.35□□□□□ -1.71
PDLIM1O00151 AC106864.1-201ENST00000510655 640 ntTSL 3 BASIC4.35□□□□□ -1.71
PDLIM1O00151 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC4.35□□□□□ -1.71
PDLIM1O00151 BTF3P13-201ENST00000513224 490 ntBASIC4.35□□□□□ -1.71
PDLIM1O00151 SNHG27-203ENST00000514222 680 ntTSL 3 BASIC4.35□□□□□ -1.71
PDLIM1O00151 AC068413.1-201ENST00000517739 776 ntTSL 5 BASIC4.35□□□□□ -1.71
PDLIM1O00151 RGS5-219ENST00000528019 512 ntTSL 4 BASIC4.35□□□□□ -1.71
PDLIM1O00151 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC4.35□□□□□ -1.71
PDLIM1O00151 LINC02375-201ENST00000545739 852 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
PDLIM1O00151 AC025423.4-201ENST00000553141 785 ntTSL 3 BASIC4.35□□□□□ -1.71
PDLIM1O00151 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC4.35□□□□□ -1.71
PDLIM1O00151 AC022166.1-201ENST00000567851 581 ntTSL 5 BASIC4.35□□□□□ -1.71
PDLIM1O00151 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC4.35□□□□□ -1.71
PDLIM1O00151 AC005084.1-201ENST00000605160 304 ntBASIC4.35□□□□□ -1.71
PDLIM1O00151 AC024940.4-201ENST00000605507 246 ntBASIC4.35□□□□□ -1.71
PDLIM1O00151 AL049539.1-201ENST00000611964 459 ntBASIC4.35□□□□□ -1.71
PDLIM1O00151 AL162574.2-201ENST00000614618 657 ntBASIC4.35□□□□□ -1.71
PDLIM1O00151 RN7SL722P-201ENST00000617780 284 ntBASIC4.35□□□□□ -1.71
PDLIM1O00151 RN7SL565P-201ENST00000618246 284 ntBASIC4.35□□□□□ -1.71
PDLIM1O00151 AL445528.2-201ENST00000620582 470 ntBASIC4.35□□□□□ -1.71
PDLIM1O00151 MIR6730-201ENST00000622213 67 ntBASIC4.35□□□□□ -1.71
PDLIM1O00151 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC4.35□□□□□ -1.71
PDLIM1O00151 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC4.35□□□□□ -1.71
PDLIM1O00151 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC4.35□□□□□ -1.71
PDLIM1O00151 MTND4P21-201ENST00000453886 1357 ntBASIC4.35□□□□□ -1.71
PDLIM1O00151 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC4.35□□□□□ -1.71
PDLIM1O00151 CYP1D1P-201ENST00000416662 1433 ntBASIC4.35□□□□□ -1.71
PDLIM1O00151 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
PDLIM1O00151 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
PDLIM1O00151 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC4.35□□□□□ -1.71
PDLIM1O00151 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
PDLIM1O00151 AL049555.1-201ENST00000562834 1933 ntBASIC4.34□□□□□ -1.71
PDLIM1O00151 AC008505.1-201ENST00000637582 2025 ntTSL 5 BASIC4.34□□□□□ -1.71
PDLIM1O00151 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
PDLIM1O00151 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC4.34□□□□□ -1.71
PDLIM1O00151 AC010329.2-201ENST00000595195 2737 ntBASIC4.34□□□□□ -1.71
PDLIM1O00151 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC4.34□□□□□ -1.71
PDLIM1O00151 RN7SKP149-201ENST00000363008 344 ntBASIC4.34□□□□□ -1.71
PDLIM1O00151 SNORD115-48-201ENST00000364764 76 ntBASIC4.34□□□□□ -1.71
PDLIM1O00151 RNA5SP22-201ENST00000365393 109 ntBASIC4.34□□□□□ -1.71
PDLIM1O00151 MRRF-203ENST00000373723 1176 ntTSL 3 BASIC4.34□□□□□ -1.71
PDLIM1O00151 AL590762.2-201ENST00000395798 571 ntBASIC4.34□□□□□ -1.71
PDLIM1O00151 AL356057.1-202ENST00000402263 756 ntBASIC4.34□□□□□ -1.71
PDLIM1O00151 RANP4-201ENST00000413361 655 ntBASIC4.34□□□□□ -1.71
PDLIM1O00151 MTATP6P19-201ENST00000413797 659 ntBASIC4.34□□□□□ -1.71
PDLIM1O00151 AC098820.3-201ENST00000414135 976 ntTSL 3 BASIC4.34□□□□□ -1.71
PDLIM1O00151 GTF2IP5-201ENST00000414608 731 ntBASIC4.34□□□□□ -1.71
PDLIM1O00151 LINC01507-201ENST00000417801 446 ntTSL 5 BASIC4.34□□□□□ -1.71
PDLIM1O00151 AC092647.1-201ENST00000420654 287 ntBASIC4.34□□□□□ -1.71
PDLIM1O00151 AC015971.1-204ENST00000424788 1147 ntTSL 5 BASIC4.34□□□□□ -1.71
PDLIM1O00151 FTH1P6-201ENST00000430768 320 ntBASIC4.34□□□□□ -1.71
PDLIM1O00151 AL365396.1-201ENST00000430854 671 ntBASIC4.34□□□□□ -1.71
PDLIM1O00151 AC092159.1-201ENST00000433724 493 ntTSL 2 BASIC4.34□□□□□ -1.71
PDLIM1O00151 AL512625.3-204ENST00000438699 1031 ntTSL 5 BASIC4.34□□□□□ -1.71
PDLIM1O00151 AC112498.1-201ENST00000444401 332 ntBASIC4.34□□□□□ -1.71
PDLIM1O00151 AL137005.1-201ENST00000452944 719 ntTSL 5 BASIC4.34□□□□□ -1.71
PDLIM1O00151 SBDSP1-204ENST00000453858 737 ntBASIC4.34□□□□□ -1.71
PDLIM1O00151 snoU13.20-201ENST00000459180 104 ntBASIC4.34□□□□□ -1.71
PDLIM1O00151 RPL23AP56-201ENST00000460778 453 ntBASIC4.34□□□□□ -1.71
PDLIM1O00151 RPS3AP41-201ENST00000462701 778 ntBASIC4.34□□□□□ -1.71
PDLIM1O00151 SUMO1P1-201ENST00000497904 306 ntBASIC4.34□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 75.1 ms