Protein–RNA interactions for Protein: A0A5B7

TCRBV4S1A1T, T-cell receptor beta variable 29-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV4S1A1TA0A5B7 FTO-203ENST00000460382 1517 ntTSL 5 BASIC3.39□□□□□ -1.87
TCRBV4S1A1TA0A5B7 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
TCRBV4S1A1TA0A5B7 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
TCRBV4S1A1TA0A5B7 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
TCRBV4S1A1TA0A5B7 CSTA-201ENST00000264474 751 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
TCRBV4S1A1TA0A5B7 OR5K1-201ENST00000332650 1097 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
TCRBV4S1A1TA0A5B7 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
TCRBV4S1A1TA0A5B7 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
TCRBV4S1A1TA0A5B7 MT-RNR1-201ENST00000389680 954 ntBASIC3.39□□□□□ -1.87
TCRBV4S1A1TA0A5B7 AL607077.1-201ENST00000401718 499 ntBASIC3.39□□□□□ -1.87
TCRBV4S1A1TA0A5B7 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC3.39□□□□□ -1.87
TCRBV4S1A1TA0A5B7 RNU6-628P-201ENST00000410675 107 ntBASIC3.39□□□□□ -1.87
TCRBV4S1A1TA0A5B7 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC3.39□□□□□ -1.87
TCRBV4S1A1TA0A5B7 AL391645.1-201ENST00000417409 506 ntTSL 3 BASIC3.39□□□□□ -1.87
TCRBV4S1A1TA0A5B7 SLC4A1APP1-201ENST00000419995 602 ntBASIC3.39□□□□□ -1.87
TCRBV4S1A1TA0A5B7 CEACAMP1-201ENST00000434624 1035 ntBASIC3.39□□□□□ -1.87
TCRBV4S1A1TA0A5B7 ELOCP8-201ENST00000439309 332 ntBASIC3.39□□□□□ -1.87
TCRBV4S1A1TA0A5B7 RPL23AP52-201ENST00000439311 478 ntBASIC3.39□□□□□ -1.87
TCRBV4S1A1TA0A5B7 DAZAP2-204ENST00000439799 701 ntTSL 2 BASIC3.39□□□□□ -1.87
TCRBV4S1A1TA0A5B7 ELOCP15-201ENST00000442090 332 ntBASIC3.39□□□□□ -1.87
TCRBV4S1A1TA0A5B7 AL512326.1-201ENST00000443050 721 ntBASIC3.39□□□□□ -1.87
TCRBV4S1A1TA0A5B7 AL161912.1-201ENST00000448475 524 ntTSL 3 BASIC3.39□□□□□ -1.87
TCRBV4S1A1TA0A5B7 EIF4A2P2-201ENST00000455776 1070 ntBASIC3.39□□□□□ -1.87
TCRBV4S1A1TA0A5B7 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC3.39□□□□□ -1.87
TCRBV4S1A1TA0A5B7 RPS7P7-201ENST00000463499 571 ntBASIC3.39□□□□□ -1.87
TCRBV4S1A1TA0A5B7 CREM-226ENST00000469949 721 ntTSL 3 BASIC3.39□□□□□ -1.87
TCRBV4S1A1TA0A5B7 RPL35P6-201ENST00000490024 372 ntBASIC3.39□□□□□ -1.87
TCRBV4S1A1TA0A5B7 SPTSSB-202ENST00000497137 880 ntAPPRIS P1 TSL 3 BASIC3.39□□□□□ -1.87
TCRBV4S1A1TA0A5B7 RN7SKP21-201ENST00000516503 220 ntBASIC3.39□□□□□ -1.87
TCRBV4S1A1TA0A5B7 NAV2-AS1-201ENST00000526642 660 ntTSL 3 BASIC3.39□□□□□ -1.87
TCRBV4S1A1TA0A5B7 OR5BC1P-201ENST00000529327 739 ntBASIC3.39□□□□□ -1.87
TCRBV4S1A1TA0A5B7 AC107918.3-201ENST00000533272 382 ntBASIC3.39□□□□□ -1.87
TCRBV4S1A1TA0A5B7 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC3.39□□□□□ -1.87
TCRBV4S1A1TA0A5B7 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC3.39□□□□□ -1.87
TCRBV4S1A1TA0A5B7 AC009396.1-201ENST00000553628 1079 ntTSL 2 BASIC3.39□□□□□ -1.87
TCRBV4S1A1TA0A5B7 BNIP3P5-201ENST00000562290 498 ntBASIC3.39□□□□□ -1.87
TCRBV4S1A1TA0A5B7 AC015849.3-201ENST00000603981 488 ntTSL 5 BASIC3.39□□□□□ -1.87
TCRBV4S1A1TA0A5B7 AC015922.4-201ENST00000612568 690 ntBASIC3.39□□□□□ -1.87
TCRBV4S1A1TA0A5B7 LRRC2-AS1-202ENST00000614743 633 ntTSL 3 BASIC3.39□□□□□ -1.87
TCRBV4S1A1TA0A5B7 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC3.39□□□□□ -1.87
TCRBV4S1A1TA0A5B7 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
TCRBV4S1A1TA0A5B7 MIR4727-201ENST00000622232 55 ntBASIC3.39□□□□□ -1.87
TCRBV4S1A1TA0A5B7 AC138907.10-201ENST00000623708 983 ntBASIC3.39□□□□□ -1.87
TCRBV4S1A1TA0A5B7 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC3.39□□□□□ -1.87
TCRBV4S1A1TA0A5B7 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC3.39□□□□□ -1.87
TCRBV4S1A1TA0A5B7 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC3.39□□□□□ -1.87
TCRBV4S1A1TA0A5B7 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC3.39□□□□□ -1.87
TCRBV4S1A1TA0A5B7 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
TCRBV4S1A1TA0A5B7 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC3.39□□□□□ -1.87
TCRBV4S1A1TA0A5B7 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC3.39□□□□□ -1.87
TCRBV4S1A1TA0A5B7 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
TCRBV4S1A1TA0A5B7 LMNTD1-202ENST00000413632 1520 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
TCRBV4S1A1TA0A5B7 NOL8P1-201ENST00000508336 3529 ntBASIC3.39□□□□□ -1.87
TCRBV4S1A1TA0A5B7 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC3.39□□□□□ -1.87
TCRBV4S1A1TA0A5B7 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC3.39□□□□□ -1.87
TCRBV4S1A1TA0A5B7 CASC19-255ENST00000641733 1385 ntBASIC3.38□□□□□ -1.87
TCRBV4S1A1TA0A5B7 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
TCRBV4S1A1TA0A5B7 USP50-205ENST00000616326 1419 ntAPPRIS ALT2 TSL 5 BASIC3.38□□□□□ -1.87
TCRBV4S1A1TA0A5B7 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC3.38□□□□□ -1.87
TCRBV4S1A1TA0A5B7 OR51A2-201ENST00000380371 942 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
TCRBV4S1A1TA0A5B7 RAC1P3-201ENST00000416129 580 ntBASIC3.38□□□□□ -1.87
TCRBV4S1A1TA0A5B7 AC073136.2-201ENST00000417282 849 ntBASIC3.38□□□□□ -1.87
TCRBV4S1A1TA0A5B7 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC3.38□□□□□ -1.87
TCRBV4S1A1TA0A5B7 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC3.38□□□□□ -1.87
TCRBV4S1A1TA0A5B7 RCC2P2-201ENST00000422174 918 ntBASIC3.38□□□□□ -1.87
TCRBV4S1A1TA0A5B7 DNAJA1P1-201ENST00000425106 1187 ntBASIC3.38□□□□□ -1.87
TCRBV4S1A1TA0A5B7 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC3.38□□□□□ -1.87
TCRBV4S1A1TA0A5B7 SNAP25-AS1-204ENST00000451151 867 ntTSL 2 BASIC3.38□□□□□ -1.87
TCRBV4S1A1TA0A5B7 RPL35AP15-201ENST00000468042 339 ntBASIC3.38□□□□□ -1.87
TCRBV4S1A1TA0A5B7 AC006517.1-201ENST00000480485 328 ntBASIC3.38□□□□□ -1.87
TCRBV4S1A1TA0A5B7 AC041039.1-201ENST00000485656 536 ntBASIC3.38□□□□□ -1.87
TCRBV4S1A1TA0A5B7 LINC00613-201ENST00000504365 467 ntTSL 3 BASIC3.38□□□□□ -1.87
TCRBV4S1A1TA0A5B7 THAP6-209ENST00000507556 1134 ntTSL 2 BASIC3.38□□□□□ -1.87
TCRBV4S1A1TA0A5B7 KCTD9P2-201ENST00000512203 1013 ntBASIC3.38□□□□□ -1.87
TCRBV4S1A1TA0A5B7 HNRNPKP5-201ENST00000515300 253 ntBASIC3.38□□□□□ -1.87
TCRBV4S1A1TA0A5B7 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC3.38□□□□□ -1.87
TCRBV4S1A1TA0A5B7 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC3.38□□□□□ -1.87
TCRBV4S1A1TA0A5B7 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC3.38□□□□□ -1.87
TCRBV4S1A1TA0A5B7 MIR3160-1-201ENST00000577972 85 ntBASIC3.38□□□□□ -1.87
TCRBV4S1A1TA0A5B7 TTN-AS1-217ENST00000585625 945 ntTSL 5 BASIC3.38□□□□□ -1.87
TCRBV4S1A1TA0A5B7 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC3.38□□□□□ -1.87
TCRBV4S1A1TA0A5B7 DAOA-AS1_1.1-201ENST00000613021 201 ntBASIC3.38□□□□□ -1.87
TCRBV4S1A1TA0A5B7 AL021997.2-201ENST00000615674 271 ntBASIC3.38□□□□□ -1.87
TCRBV4S1A1TA0A5B7 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC3.38□□□□□ -1.87
TCRBV4S1A1TA0A5B7 MIR7702-201ENST00000621931 59 ntBASIC3.38□□□□□ -1.87
TCRBV4S1A1TA0A5B7 AC008785.1-201ENST00000624475 456 ntBASIC3.38□□□□□ -1.87
TCRBV4S1A1TA0A5B7 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
TCRBV4S1A1TA0A5B7 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC3.38□□□□□ -1.87
TCRBV4S1A1TA0A5B7 CNTD1-205ENST00000588527 1308 ntTSL 2 BASIC3.38□□□□□ -1.87
TCRBV4S1A1TA0A5B7 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
TCRBV4S1A1TA0A5B7 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC3.37□□□□□ -1.87
TCRBV4S1A1TA0A5B7 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
TCRBV4S1A1TA0A5B7 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC3.37□□□□□ -1.87
TCRBV4S1A1TA0A5B7 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC3.37□□□□□ -1.87
TCRBV4S1A1TA0A5B7 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC3.37□□□□□ -1.87
TCRBV4S1A1TA0A5B7 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
TCRBV4S1A1TA0A5B7 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
TCRBV4S1A1TA0A5B7 RNA5SP502-201ENST00000362694 119 ntBASIC3.37□□□□□ -1.87
TCRBV4S1A1TA0A5B7 SNORA57.1-201ENST00000391227 145 ntBASIC3.37□□□□□ -1.87
TCRBV4S1A1TA0A5B7 AL022722.2-201ENST00000402519 180 ntBASIC3.37□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 127.7 ms