Protein–RNA interactions for Protein: A0A539

TCRBV7S3A2, T-cell receptor beta variable 4-2 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV7S3A2A0A539 HIGD1AP12-201ENST00000427832 281 ntBASIC4.87□□□□□ -1.63
TCRBV7S3A2A0A539 AL354977.2-201ENST00000430387 728 ntTSL 3 BASIC4.87□□□□□ -1.63
TCRBV7S3A2A0A539 RPS27P18-201ENST00000431701 247 ntBASIC4.87□□□□□ -1.63
TCRBV7S3A2A0A539 RPS6P15-201ENST00000431996 751 ntBASIC4.87□□□□□ -1.63
TCRBV7S3A2A0A539 EEF1B2P5-201ENST00000444820 548 ntBASIC4.87□□□□□ -1.63
TCRBV7S3A2A0A539 AC091959.2-201ENST00000477363 321 ntBASIC4.87□□□□□ -1.63
TCRBV7S3A2A0A539 RN7SL727P-201ENST00000482164 296 ntBASIC4.87□□□□□ -1.63
TCRBV7S3A2A0A539 LINC02027-201ENST00000482617 596 ntTSL 5 BASIC4.87□□□□□ -1.63
TCRBV7S3A2A0A539 AC091826.2-201ENST00000504034 412 ntTSL 3 BASIC4.87□□□□□ -1.63
TCRBV7S3A2A0A539 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC4.87□□□□□ -1.63
TCRBV7S3A2A0A539 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC4.87□□□□□ -1.63
TCRBV7S3A2A0A539 AC093297.1-201ENST00000511712 591 ntTSL 4 BASIC4.87□□□□□ -1.63
TCRBV7S3A2A0A539 AC106894.1-201ENST00000511735 451 ntTSL 5 BASIC4.87□□□□□ -1.63
TCRBV7S3A2A0A539 RN7SKP46-201ENST00000515942 234 ntBASIC4.87□□□□□ -1.63
TCRBV7S3A2A0A539 AC100802.1-201ENST00000519197 1026 ntTSL 3 BASIC4.87□□□□□ -1.63
TCRBV7S3A2A0A539 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC4.87□□□□□ -1.63
TCRBV7S3A2A0A539 GCSHP4-201ENST00000538792 439 ntBASIC4.87□□□□□ -1.63
TCRBV7S3A2A0A539 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC4.87□□□□□ -1.63
TCRBV7S3A2A0A539 AC079075.1-201ENST00000559543 878 ntBASIC4.87□□□□□ -1.63
TCRBV7S3A2A0A539 AC090695.1-201ENST00000561269 1222 ntBASIC4.87□□□□□ -1.63
TCRBV7S3A2A0A539 MIR4310-201ENST00000582950 57 ntBASIC4.87□□□□□ -1.63
TCRBV7S3A2A0A539 AC015688.2-201ENST00000584523 262 ntBASIC4.87□□□□□ -1.63
TCRBV7S3A2A0A539 AP005131.3-201ENST00000590042 665 ntTSL 3 BASIC4.87□□□□□ -1.63
TCRBV7S3A2A0A539 AC020910.3-201ENST00000603701 874 ntBASIC4.87□□□□□ -1.63
TCRBV7S3A2A0A539 AL445423.1-201ENST00000609941 536 ntBASIC4.87□□□□□ -1.63
TCRBV7S3A2A0A539 AC097478.2-201ENST00000610572 514 ntBASIC4.87□□□□□ -1.63
TCRBV7S3A2A0A539 MIR6768-201ENST00000610734 72 ntBASIC4.87□□□□□ -1.63
TCRBV7S3A2A0A539 AC092106.3-201ENST00000611308 722 ntBASIC4.87□□□□□ -1.63
TCRBV7S3A2A0A539 AC022079.1-201ENST00000621546 602 ntBASIC4.87□□□□□ -1.63
TCRBV7S3A2A0A539 AC079416.3-201ENST00000624479 549 ntBASIC4.87□□□□□ -1.63
TCRBV7S3A2A0A539 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC4.87□□□□□ -1.63
TCRBV7S3A2A0A539 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
TCRBV7S3A2A0A539 FASTKD3-201ENST00000264669 2402 ntAPPRIS P1 TSL 2 BASIC4.87□□□□□ -1.63
TCRBV7S3A2A0A539 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC4.87□□□□□ -1.63
TCRBV7S3A2A0A539 AC107068.1-201ENST00000563286 4218 ntBASIC4.87□□□□□ -1.63
TCRBV7S3A2A0A539 PGM3-211ENST00000512866 2013 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
TCRBV7S3A2A0A539 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC4.87□□□□□ -1.63
TCRBV7S3A2A0A539 RMST-202ENST00000541282 2099 ntTSL 2 BASIC4.87□□□□□ -1.63
TCRBV7S3A2A0A539 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC4.87□□□□□ -1.63
TCRBV7S3A2A0A539 STAP1-201ENST00000265404 1511 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
TCRBV7S3A2A0A539 AC104260.2-201ENST00000623551 3497 ntBASIC4.87□□□□□ -1.63
TCRBV7S3A2A0A539 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
TCRBV7S3A2A0A539 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
TCRBV7S3A2A0A539 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
TCRBV7S3A2A0A539 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC4.86□□□□□ -1.63
TCRBV7S3A2A0A539 OR8A1-203ENST00000641670 5709 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
TCRBV7S3A2A0A539 TAS2R9-201ENST00000240691 1075 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
TCRBV7S3A2A0A539 AC135895.1-201ENST00000360528 1058 ntTSL 5 BASIC4.86□□□□□ -1.63
TCRBV7S3A2A0A539 RN7SKP95-201ENST00000362860 303 ntBASIC4.86□□□□□ -1.63
TCRBV7S3A2A0A539 MLLT3-201ENST00000380321 708 ntTSL 3 BASIC4.86□□□□□ -1.63
TCRBV7S3A2A0A539 AL138749.1-201ENST00000397864 791 ntTSL 5 BASIC4.86□□□□□ -1.63
TCRBV7S3A2A0A539 AL080315.1-201ENST00000406055 466 ntBASIC4.86□□□□□ -1.63
TCRBV7S3A2A0A539 FCF1P5-201ENST00000406490 482 ntBASIC4.86□□□□□ -1.63
TCRBV7S3A2A0A539 ELOCP9-201ENST00000418624 239 ntBASIC4.86□□□□□ -1.63
TCRBV7S3A2A0A539 LINC00308-201ENST00000419431 727 ntTSL 5 BASIC4.86□□□□□ -1.63
TCRBV7S3A2A0A539 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC4.86□□□□□ -1.63
TCRBV7S3A2A0A539 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC4.86□□□□□ -1.63
TCRBV7S3A2A0A539 AC012519.1-201ENST00000424588 610 ntBASIC4.86□□□□□ -1.63
TCRBV7S3A2A0A539 OR5AW1P-201ENST00000426334 1006 ntBASIC4.86□□□□□ -1.63
TCRBV7S3A2A0A539 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC4.86□□□□□ -1.63
TCRBV7S3A2A0A539 RPS26P2-201ENST00000440331 348 ntBASIC4.86□□□□□ -1.63
TCRBV7S3A2A0A539 NPM1P13-201ENST00000452663 865 ntBASIC4.86□□□□□ -1.63
TCRBV7S3A2A0A539 VN1R40P-201ENST00000455196 941 ntBASIC4.86□□□□□ -1.63
TCRBV7S3A2A0A539 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC4.86□□□□□ -1.63
TCRBV7S3A2A0A539 APOA2-207ENST00000470459 416 ntTSL 5 BASIC4.86□□□□□ -1.63
TCRBV7S3A2A0A539 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC4.86□□□□□ -1.63
TCRBV7S3A2A0A539 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
TCRBV7S3A2A0A539 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC4.86□□□□□ -1.63
TCRBV7S3A2A0A539 RPS4XP18-201ENST00000495480 763 ntBASIC4.86□□□□□ -1.63
TCRBV7S3A2A0A539 AC140172.1-201ENST00000502928 141 ntBASIC4.86□□□□□ -1.63
TCRBV7S3A2A0A539 LINC01088-205ENST00000509088 756 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
TCRBV7S3A2A0A539 AC026782.2-201ENST00000510845 636 ntBASIC4.86□□□□□ -1.63
TCRBV7S3A2A0A539 AC108471.1-201ENST00000513977 287 ntBASIC4.86□□□□□ -1.63
TCRBV7S3A2A0A539 LINC02465-204ENST00000514892 481 ntTSL 2 BASIC4.86□□□□□ -1.63
TCRBV7S3A2A0A539 RN7SKP147-201ENST00000517154 244 ntBASIC4.86□□□□□ -1.63
TCRBV7S3A2A0A539 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC4.86□□□□□ -1.63
TCRBV7S3A2A0A539 AC068413.1-201ENST00000517739 776 ntTSL 5 BASIC4.86□□□□□ -1.63
TCRBV7S3A2A0A539 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC4.86□□□□□ -1.63
TCRBV7S3A2A0A539 AC022832.1-201ENST00000530718 645 ntBASIC4.86□□□□□ -1.63
TCRBV7S3A2A0A539 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC4.86□□□□□ -1.63
TCRBV7S3A2A0A539 G2E3-AS1-201ENST00000548631 579 ntTSL 3 BASIC4.86□□□□□ -1.63
TCRBV7S3A2A0A539 AC007225.2-201ENST00000562529 256 ntBASIC4.86□□□□□ -1.63
TCRBV7S3A2A0A539 AC055855.3-201ENST00000564269 578 ntTSL 2 BASIC4.86□□□□□ -1.63
TCRBV7S3A2A0A539 AC023813.2-201ENST00000564321 469 ntBASIC4.86□□□□□ -1.63
TCRBV7S3A2A0A539 AC005412.1-201ENST00000580812 1049 ntBASIC4.86□□□□□ -1.63
TCRBV7S3A2A0A539 AC209154.1-201ENST00000582156 337 ntBASIC4.86□□□□□ -1.63
TCRBV7S3A2A0A539 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC4.86□□□□□ -1.63
TCRBV7S3A2A0A539 AC018761.4-201ENST00000585742 272 ntTSL 3 BASIC4.86□□□□□ -1.63
TCRBV7S3A2A0A539 AC016493.1-201ENST00000586106 688 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
TCRBV7S3A2A0A539 VN1R88P-201ENST00000596787 292 ntBASIC4.86□□□□□ -1.63
TCRBV7S3A2A0A539 MTND3P19-201ENST00000603825 345 ntBASIC4.86□□□□□ -1.63
TCRBV7S3A2A0A539 AC007349.4-201ENST00000608114 532 ntBASIC4.86□□□□□ -1.63
TCRBV7S3A2A0A539 AL139407.1-201ENST00000613826 1175 ntBASIC4.86□□□□□ -1.63
TCRBV7S3A2A0A539 AP003497.2-201ENST00000624220 967 ntBASIC4.86□□□□□ -1.63
TCRBV7S3A2A0A539 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC4.86□□□□□ -1.63
TCRBV7S3A2A0A539 CU459211.1-201ENST00000635667 749 ntBASIC4.86□□□□□ -1.63
TCRBV7S3A2A0A539 MIR4302-201ENST00000638058 60 ntBASIC4.86□□□□□ -1.63
TCRBV7S3A2A0A539 AC073869.7-201ENST00000640874 297 ntBASIC4.86□□□□□ -1.63
TCRBV7S3A2A0A539 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC4.86□□□□□ -1.63
TCRBV7S3A2A0A539 EOGT-209ENST00000540955 1332 ntTSL 2 BASIC4.86□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 103.5 ms