Protein–RNA interactions for Protein: Q9UPM6

LHX6, LIM/homeobox protein Lhx6, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX6Q9UPM6 FGD6-205ENST00000549499 3757 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
LHX6Q9UPM6 GJC1-201ENST00000330514 3295 ntAPPRIS P1 TSL 2 BASIC7.34□□□□□ -1.23
LHX6Q9UPM6 HNRNPR-210ENST00000478691 7646 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
LHX6Q9UPM6 IL31RA-203ENST00000359040 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC7.34□□□□□ -1.23
LHX6Q9UPM6 KMT2A-213ENST00000534358 16602 ntAPPRIS ALT2 TSL 1 (best) BASIC7.34□□□□□ -1.23
LHX6Q9UPM6 ZNF69-202ENST00000429654 2010 ntAPPRIS P1 TSL 2 BASIC7.34□□□□□ -1.23
LHX6Q9UPM6 TMEM267-202ENST00000500337 2950 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
LHX6Q9UPM6 MYO6-202ENST00000369977 5597 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
LHX6Q9UPM6 LINC02367-201ENST00000567749 4388 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
LHX6Q9UPM6 HIST1H2BN-203ENST00000606613 4137 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
LHX6Q9UPM6 SERPINA6-201ENST00000341584 1534 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
LHX6Q9UPM6 ZNF234-201ENST00000426739 4551 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
LHX6Q9UPM6 HIST1H2BA-201ENST00000274764 516 ntAPPRIS P1 BASIC7.34□□□□□ -1.23
LHX6Q9UPM6 MT1A-201ENST00000290705 396 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
LHX6Q9UPM6 RNU5B-2P-201ENST00000363036 113 ntBASIC7.34□□□□□ -1.23
LHX6Q9UPM6 SNORD81.1-201ENST00000363064 77 ntBASIC7.34□□□□□ -1.23
LHX6Q9UPM6 RNU6-1078P-201ENST00000364522 103 ntBASIC7.34□□□□□ -1.23
LHX6Q9UPM6 SNORA23-201ENST00000365128 182 ntBASIC7.34□□□□□ -1.23
LHX6Q9UPM6 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC7.34□□□□□ -1.23
LHX6Q9UPM6 MIR215-201ENST00000384858 110 ntBASIC7.34□□□□□ -1.23
LHX6Q9UPM6 AL133384.1-201ENST00000412744 351 ntBASIC7.34□□□□□ -1.23
LHX6Q9UPM6 RPL30P2-201ENST00000414021 291 ntBASIC7.34□□□□□ -1.23
LHX6Q9UPM6 AC114491.1-201ENST00000416095 246 ntBASIC7.34□□□□□ -1.23
LHX6Q9UPM6 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC7.34□□□□□ -1.23
LHX6Q9UPM6 LINC01501-201ENST00000427523 409 ntTSL 3 BASIC7.34□□□□□ -1.23
LHX6Q9UPM6 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC7.34□□□□□ -1.23
LHX6Q9UPM6 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC7.34□□□□□ -1.23
LHX6Q9UPM6 AC012368.1-201ENST00000438115 552 ntTSL 3 BASIC7.34□□□□□ -1.23
LHX6Q9UPM6 AQP4-203ENST00000440832 1169 ntTSL 5 BASIC7.34□□□□□ -1.23
LHX6Q9UPM6 LINC01015-204ENST00000445296 399 ntTSL 3 BASIC7.34□□□□□ -1.23
LHX6Q9UPM6 AC074286.1-201ENST00000452002 544 ntTSL 4 BASIC7.34□□□□□ -1.23
LHX6Q9UPM6 AC144530.1-201ENST00000452862 555 ntBASIC7.34□□□□□ -1.23
LHX6Q9UPM6 AC006026.3-201ENST00000454029 143 ntTSL 3 BASIC7.34□□□□□ -1.23
LHX6Q9UPM6 AC006967.1-201ENST00000467608 589 ntBASIC7.34□□□□□ -1.23
LHX6Q9UPM6 AC087884.1-201ENST00000469738 328 ntBASIC7.34□□□□□ -1.23
LHX6Q9UPM6 AP000797.2-201ENST00000475768 606 ntBASIC7.34□□□□□ -1.23
LHX6Q9UPM6 AC005550.2-201ENST00000476382 318 ntBASIC7.34□□□□□ -1.23
LHX6Q9UPM6 AC098818.1-201ENST00000478593 252 ntBASIC7.34□□□□□ -1.23
LHX6Q9UPM6 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC7.34□□□□□ -1.23
LHX6Q9UPM6 MRPL42P6-201ENST00000486397 371 ntBASIC7.34□□□□□ -1.23
LHX6Q9UPM6 RPL19P11-201ENST00000495944 589 ntBASIC7.34□□□□□ -1.23
LHX6Q9UPM6 SERF1AP1-201ENST00000514575 187 ntBASIC7.34□□□□□ -1.23
LHX6Q9UPM6 AC112191.2-201ENST00000522428 333 ntBASIC7.34□□□□□ -1.23
LHX6Q9UPM6 SLC22A10-203ENST00000526800 699 ntTSL 5 BASIC7.34□□□□□ -1.23
LHX6Q9UPM6 FAM174B-202ENST00000553393 495 ntTSL 2 BASIC7.34□□□□□ -1.23
LHX6Q9UPM6 AL135978.1-201ENST00000553618 1266 ntBASIC7.34□□□□□ -1.23
LHX6Q9UPM6 AC109446.1-201ENST00000566172 220 ntBASIC7.34□□□□□ -1.23
LHX6Q9UPM6 MIR3144-201ENST00000579460 79 ntBASIC7.34□□□□□ -1.23
LHX6Q9UPM6 AC072026.1-201ENST00000605023 201 ntBASIC7.34□□□□□ -1.23
LHX6Q9UPM6 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC7.34□□□□□ -1.23
LHX6Q9UPM6 AC123768.4-201ENST00000616244 701 ntBASIC7.34□□□□□ -1.23
LHX6Q9UPM6 CDRT1-208ENST00000630868 794 ntBASIC7.34□□□□□ -1.23
LHX6Q9UPM6 SPOCK1-201ENST00000282223 4488 ntTSL 5 BASIC7.34□□□□□ -1.23
LHX6Q9UPM6 BBX-207ENST00000416476 2178 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
LHX6Q9UPM6 BTF3L4-202ENST00000472944 2159 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
LHX6Q9UPM6 OR5B2-202ENST00000641342 2184 ntAPPRIS P1 BASIC7.34□□□□□ -1.23
LHX6Q9UPM6 ZNF451-204ENST00000370708 9478 ntTSL 2 BASIC7.34□□□□□ -1.23
LHX6Q9UPM6 AC114776.1-201ENST00000414159 4395 ntTSL 5 BASIC7.34□□□□□ -1.23
LHX6Q9UPM6 POTEH-AS1-201ENST00000422014 2566 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
LHX6Q9UPM6 CD46-203ENST00000354848 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC7.34□□□□□ -1.23
LHX6Q9UPM6 Z95327.2-201ENST00000414579 1873 ntBASIC7.34□□□□□ -1.23
LHX6Q9UPM6 ZNF136-201ENST00000343979 3643 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
LHX6Q9UPM6 KRT73-AS1-203ENST00000552364 3808 ntTSL 2 BASIC7.34□□□□□ -1.23
LHX6Q9UPM6 EFHC1-233ENST00000637353 3829 ntTSL 5 BASIC7.34□□□□□ -1.23
LHX6Q9UPM6 CHAF1B-201ENST00000314103 4480 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
LHX6Q9UPM6 ACSL5-203ENST00000356116 3353 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
LHX6Q9UPM6 SLC16A4-210ENST00000541986 2496 ntTSL 2 BASIC7.34□□□□□ -1.24
LHX6Q9UPM6 AC103710.2-202ENST00000641454 2853 ntBASIC7.34□□□□□ -1.24
LHX6Q9UPM6 C1S-205ENST00000406697 3076 ntAPPRIS P1 TSL 2 BASIC7.33□□□□□ -1.24
LHX6Q9UPM6 RAD51B-212ENST00000488612 1550 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
LHX6Q9UPM6 NXPH1-205ENST00000602349 1953 ntBASIC7.33□□□□□ -1.24
LHX6Q9UPM6 FER-202ENST00000438717 1531 ntTSL 2 BASIC7.33□□□□□ -1.24
LHX6Q9UPM6 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC7.33□□□□□ -1.24
LHX6Q9UPM6 EFCAB7-201ENST00000371088 2313 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
LHX6Q9UPM6 CENPI-204ENST00000423383 2314 ntAPPRIS P3 TSL 5 BASIC7.33□□□□□ -1.24
LHX6Q9UPM6 SYT1-212ENST00000552744 2718 ntAPPRIS P3 TSL 1 (best) BASIC7.33□□□□□ -1.24
LHX6Q9UPM6 AP3M1-201ENST00000355264 5124 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
LHX6Q9UPM6 KIAA0100-203ENST00000544884 6856 ntAPPRIS ALT2 TSL 1 (best) BASIC7.33□□□□□ -1.24
LHX6Q9UPM6 LTBP1-202ENST00000404525 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC7.33□□□□□ -1.24
LHX6Q9UPM6 AL356289.3-201ENST00000640049 2669 ntBASIC7.33□□□□□ -1.24
LHX6Q9UPM6 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
LHX6Q9UPM6 RNU6-215P-201ENST00000365169 102 ntBASIC7.33□□□□□ -1.24
LHX6Q9UPM6 MIR19A-201ENST00000384878 82 ntBASIC7.33□□□□□ -1.24
LHX6Q9UPM6 CREM-214ENST00000395887 849 ntTSL 5 BASIC7.33□□□□□ -1.24
LHX6Q9UPM6 AL358779.1-201ENST00000415465 400 ntTSL 2 BASIC7.33□□□□□ -1.24
LHX6Q9UPM6 LINC01058-201ENST00000420694 448 ntTSL 5 BASIC7.33□□□□□ -1.24
LHX6Q9UPM6 AC008496.2-201ENST00000421252 460 ntTSL 3 BASIC7.33□□□□□ -1.24
LHX6Q9UPM6 GH2-202ENST00000423893 819 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
LHX6Q9UPM6 FAR2P4-202ENST00000425399 584 ntBASIC7.33□□□□□ -1.24
LHX6Q9UPM6 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC7.33□□□□□ -1.24
LHX6Q9UPM6 RPL23AP31-201ENST00000456160 467 ntBASIC7.33□□□□□ -1.24
LHX6Q9UPM6 RNU7-167P-201ENST00000459160 62 ntBASIC7.33□□□□□ -1.24
LHX6Q9UPM6 Y_RNA.662-201ENST00000516028 97 ntBASIC7.33□□□□□ -1.24
LHX6Q9UPM6 AC144568.1-201ENST00000520139 137 ntBASIC7.33□□□□□ -1.24
LHX6Q9UPM6 IGHVII-78-1-201ENST00000521105 269 ntBASIC7.33□□□□□ -1.24
LHX6Q9UPM6 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC7.33□□□□□ -1.24
LHX6Q9UPM6 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC7.33□□□□□ -1.24
LHX6Q9UPM6 AC004024.1-201ENST00000549244 247 ntBASIC7.33□□□□□ -1.24
LHX6Q9UPM6 SLC7A7-210ENST00000554517 1158 ntTSL 5 BASIC7.33□□□□□ -1.24
LHX6Q9UPM6 AP3S2-214ENST00000560940 519 ntTSL 5 BASIC7.33□□□□□ -1.24
Retrieved 100 of 98,524 protein–RNA pairs in 135.2 ms