Protein–RNA interactions for Protein: Q9UGM1

CHRNA9, Neuronal acetylcholine receptor subunit alpha-9, humanhuman

Predictions only

Length 479 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA9Q9UGM1 CYCSP10-201ENST00000417973 294 ntBASIC4.2□□□□□ -1.74
CHRNA9Q9UGM1 AC004448.2-201ENST00000422360 586 ntBASIC4.2□□□□□ -1.74
CHRNA9Q9UGM1 AL031736.2-201ENST00000426573 787 ntBASIC4.2□□□□□ -1.74
CHRNA9Q9UGM1 LINC02476-202ENST00000431071 559 ntTSL 4 BASIC4.2□□□□□ -1.74
CHRNA9Q9UGM1 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC4.2□□□□□ -1.74
CHRNA9Q9UGM1 AL772161.1-201ENST00000439130 476 ntBASIC4.2□□□□□ -1.74
CHRNA9Q9UGM1 MTOR-AS1-202ENST00000445982 705 ntTSL 5 BASIC4.2□□□□□ -1.74
CHRNA9Q9UGM1 AC108463.1-201ENST00000450258 347 ntBASIC4.2□□□□□ -1.74
CHRNA9Q9UGM1 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC4.2□□□□□ -1.74
CHRNA9Q9UGM1 RPL35AP28-201ENST00000459730 331 ntBASIC4.2□□□□□ -1.74
CHRNA9Q9UGM1 CABYRP1-201ENST00000465493 1045 ntBASIC4.2□□□□□ -1.74
CHRNA9Q9UGM1 AC104763.1-201ENST00000475274 360 ntBASIC4.2□□□□□ -1.74
CHRNA9Q9UGM1 TCP11X3P-202ENST00000514289 1254 ntBASIC4.2□□□□□ -1.74
CHRNA9Q9UGM1 RNA5SP446-201ENST00000515955 82 ntBASIC4.2□□□□□ -1.74
CHRNA9Q9UGM1 AC087379.1-201ENST00000524613 993 ntTSL 5 BASIC4.2□□□□□ -1.74
CHRNA9Q9UGM1 AC104009.1-203ENST00000531304 571 ntTSL 4 BASIC4.2□□□□□ -1.74
CHRNA9Q9UGM1 KBTBD3-204ENST00000531482 874 ntTSL 3 BASIC4.2□□□□□ -1.74
CHRNA9Q9UGM1 GSTP1P1-201ENST00000548078 319 ntBASIC4.2□□□□□ -1.74
CHRNA9Q9UGM1 DNAL1-205ENST00000554339 548 ntTSL 5 BASIC4.2□□□□□ -1.74
CHRNA9Q9UGM1 AL136501.1-201ENST00000555913 790 ntTSL 2 BASIC4.2□□□□□ -1.74
CHRNA9Q9UGM1 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC4.2□□□□□ -1.74
CHRNA9Q9UGM1 MIR4270-201ENST00000581799 70 ntBASIC4.2□□□□□ -1.74
CHRNA9Q9UGM1 MIR4480-201ENST00000582492 71 ntBASIC4.2□□□□□ -1.74
CHRNA9Q9UGM1 HMGB2P1-201ENST00000591146 634 ntBASIC4.2□□□□□ -1.74
CHRNA9Q9UGM1 AC024940.4-201ENST00000605507 246 ntBASIC4.2□□□□□ -1.74
CHRNA9Q9UGM1 AC004948.1-201ENST00000609858 672 ntBASIC4.2□□□□□ -1.74
CHRNA9Q9UGM1 uc_338.18-201ENST00000615451 175 ntBASIC4.2□□□□□ -1.74
CHRNA9Q9UGM1 OR51F2-202ENST00000641672 1136 ntAPPRIS P2 BASIC4.2□□□□□ -1.74
CHRNA9Q9UGM1 ZNF137P-201ENST00000456718 1920 ntBASIC4.2□□□□□ -1.74
CHRNA9Q9UGM1 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
CHRNA9Q9UGM1 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
CHRNA9Q9UGM1 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC4.2□□□□□ -1.74
CHRNA9Q9UGM1 MAPK10-303ENST00000641324 3959 ntBASIC4.2□□□□□ -1.74
CHRNA9Q9UGM1 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC4.2□□□□□ -1.74
CHRNA9Q9UGM1 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
CHRNA9Q9UGM1 AC135352.1-201ENST00000506173 1418 ntBASIC4.2□□□□□ -1.74
CHRNA9Q9UGM1 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
CHRNA9Q9UGM1 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC4.2□□□□□ -1.74
CHRNA9Q9UGM1 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
CHRNA9Q9UGM1 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC4.19□□□□□ -1.74
CHRNA9Q9UGM1 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
CHRNA9Q9UGM1 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
CHRNA9Q9UGM1 AC108467.2-201ENST00000617640 1597 ntBASIC4.19□□□□□ -1.74
CHRNA9Q9UGM1 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
CHRNA9Q9UGM1 AC018529.3-201ENST00000624212 2254 ntBASIC4.19□□□□□ -1.74
CHRNA9Q9UGM1 AC009501.3-201ENST00000605001 1352 ntBASIC4.19□□□□□ -1.74
CHRNA9Q9UGM1 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC4.19□□□□□ -1.74
CHRNA9Q9UGM1 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC4.19□□□□□ -1.74
CHRNA9Q9UGM1 RNU2-17P-201ENST00000410290 190 ntBASIC4.19□□□□□ -1.74
CHRNA9Q9UGM1 AL450992.3-201ENST00000413192 568 ntBASIC4.19□□□□□ -1.74
CHRNA9Q9UGM1 AL139128.1-201ENST00000413921 941 ntBASIC4.19□□□□□ -1.74
CHRNA9Q9UGM1 MTND4P24-201ENST00000424002 397 ntBASIC4.19□□□□□ -1.74
CHRNA9Q9UGM1 USP9YP9-201ENST00000429406 715 ntBASIC4.19□□□□□ -1.74
CHRNA9Q9UGM1 AC023347.2-201ENST00000433994 462 ntBASIC4.19□□□□□ -1.74
CHRNA9Q9UGM1 AC136489.1-201ENST00000438181 717 ntTSL 3 BASIC4.19□□□□□ -1.74
CHRNA9Q9UGM1 AL035706.1-201ENST00000439186 683 ntTSL 3 BASIC4.19□□□□□ -1.74
CHRNA9Q9UGM1 AC009365.2-201ENST00000453078 799 ntTSL 3 BASIC4.19□□□□□ -1.74
CHRNA9Q9UGM1 AL356289.2-201ENST00000455238 292 ntTSL 5 BASIC4.19□□□□□ -1.74
CHRNA9Q9UGM1 RPL23AP65-201ENST00000475608 468 ntBASIC4.19□□□□□ -1.74
CHRNA9Q9UGM1 AC092924.1-201ENST00000496084 487 ntTSL 4 BASIC4.19□□□□□ -1.74
CHRNA9Q9UGM1 AC231760.1-201ENST00000498002 260 ntBASIC4.19□□□□□ -1.74
CHRNA9Q9UGM1 ARL4AP1-201ENST00000503220 705 ntBASIC4.19□□□□□ -1.74
CHRNA9Q9UGM1 AC021146.3-201ENST00000511911 260 ntBASIC4.19□□□□□ -1.74
CHRNA9Q9UGM1 IGKV2-36-201ENST00000519999 223 ntBASIC4.19□□□□□ -1.74
CHRNA9Q9UGM1 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC4.19□□□□□ -1.74
CHRNA9Q9UGM1 AC027804.1-201ENST00000534653 529 ntTSL 2 BASIC4.19□□□□□ -1.74
CHRNA9Q9UGM1 ELOCP28-201ENST00000590044 317 ntBASIC4.19□□□□□ -1.74
CHRNA9Q9UGM1 AL157938.2-208ENST00000590461 877 ntTSL 5 BASIC4.19□□□□□ -1.74
CHRNA9Q9UGM1 RPL7P50-201ENST00000600588 727 ntBASIC4.19□□□□□ -1.74
CHRNA9Q9UGM1 IGKV1OR2-9-201ENST00000603957 287 ntBASIC4.19□□□□□ -1.74
CHRNA9Q9UGM1 IGKV1OR2-11-201ENST00000604120 287 ntBASIC4.19□□□□□ -1.74
CHRNA9Q9UGM1 AC011374.2-201ENST00000607135 526 ntBASIC4.19□□□□□ -1.74
CHRNA9Q9UGM1 AC091979.2-201ENST00000607514 214 ntBASIC4.19□□□□□ -1.74
CHRNA9Q9UGM1 PRKCQ-AS1-213ENST00000613985 883 ntTSL 5 BASIC4.19□□□□□ -1.74
CHRNA9Q9UGM1 AC020658.4-201ENST00000613987 684 ntBASIC4.19□□□□□ -1.74
CHRNA9Q9UGM1 AC104307.1-201ENST00000616142 196 ntBASIC4.19□□□□□ -1.74
CHRNA9Q9UGM1 U6.48-201ENST00000618523 106 ntBASIC4.19□□□□□ -1.74
CHRNA9Q9UGM1 AC243829.4-201ENST00000620056 701 ntTSL 5 BASIC4.19□□□□□ -1.74
CHRNA9Q9UGM1 AC067852.7-201ENST00000623270 535 ntBASIC4.19□□□□□ -1.74
CHRNA9Q9UGM1 AL358975.1-202ENST00000628133 589 ntTSL 5 BASIC4.19□□□□□ -1.74
CHRNA9Q9UGM1 U3.53-201ENST00000628922 216 ntBASIC4.19□□□□□ -1.74
CHRNA9Q9UGM1 CDRT1-208ENST00000630868 794 ntBASIC4.19□□□□□ -1.74
CHRNA9Q9UGM1 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC4.19□□□□□ -1.74
CHRNA9Q9UGM1 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
CHRNA9Q9UGM1 AC010928.1-201ENST00000592477 1447 ntBASIC4.19□□□□□ -1.74
CHRNA9Q9UGM1 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC4.19□□□□□ -1.74
CHRNA9Q9UGM1 PMCHL1-201ENST00000418902 1917 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
CHRNA9Q9UGM1 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
CHRNA9Q9UGM1 LINC01619-203ENST00000549802 2169 ntTSL 2 BASIC4.19□□□□□ -1.74
CHRNA9Q9UGM1 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC4.18□□□□□ -1.74
CHRNA9Q9UGM1 CARF-203ENST00000414439 2099 ntTSL 2 BASIC4.18□□□□□ -1.74
CHRNA9Q9UGM1 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.18□□□□□ -1.74
CHRNA9Q9UGM1 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
CHRNA9Q9UGM1 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
CHRNA9Q9UGM1 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC4.18□□□□□ -1.74
CHRNA9Q9UGM1 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC4.18□□□□□ -1.74
CHRNA9Q9UGM1 EIF2AP4-201ENST00000424793 1781 ntBASIC4.18□□□□□ -1.74
CHRNA9Q9UGM1 OR5T3-201ENST00000303059 1023 ntBASIC4.18□□□□□ -1.74
CHRNA9Q9UGM1 C1orf100-201ENST00000308105 579 ntAPPRIS P1 TSL 2 BASIC4.18□□□□□ -1.74
CHRNA9Q9UGM1 IL6STP1-201ENST00000346911 1020 ntBASIC4.18□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 109.1 ms