Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
LRFN1Q9P244 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC4.98□□□□□ -1.61
LRFN1Q9P244 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC4.98□□□□□ -1.61
LRFN1Q9P244 AC093519.1-201ENST00000566109 298 ntBASIC4.98□□□□□ -1.61
LRFN1Q9P244 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC4.98□□□□□ -1.61
LRFN1Q9P244 AC245036.5-201ENST00000596330 847 ntBASIC4.98□□□□□ -1.61
LRFN1Q9P244 BNIP3P26-201ENST00000600827 554 ntBASIC4.98□□□□□ -1.61
LRFN1Q9P244 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC4.98□□□□□ -1.61
LRFN1Q9P244 DARS-AS1-220ENST00000607985 660 ntTSL 5 BASIC4.98□□□□□ -1.61
LRFN1Q9P244 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC4.98□□□□□ -1.61
LRFN1Q9P244 AC126915.2-201ENST00000610957 190 ntBASIC4.98□□□□□ -1.61
LRFN1Q9P244 Mico1.1-201ENST00000611698 204 ntBASIC4.98□□□□□ -1.61
LRFN1Q9P244 C1orf185-204ENST00000612209 899 ntAPPRIS ALT2 TSL 2 BASIC4.98□□□□□ -1.61
LRFN1Q9P244 AC009464.1-201ENST00000615731 469 ntBASIC4.98□□□□□ -1.61
LRFN1Q9P244 AC109583.2-201ENST00000617367 129 ntBASIC4.98□□□□□ -1.61
LRFN1Q9P244 AC090510.2-201ENST00000617465 629 ntBASIC4.98□□□□□ -1.61
LRFN1Q9P244 AL355306.2-208ENST00000634868 1251 ntTSL 5 BASIC4.98□□□□□ -1.61
LRFN1Q9P244 MYBPC1-221ENST00000551300 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
LRFN1Q9P244 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC4.98□□□□□ -1.61
LRFN1Q9P244 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
LRFN1Q9P244 MTND5P31-201ENST00000419366 1374 ntBASIC4.98□□□□□ -1.61
LRFN1Q9P244 ZNF876P-202ENST00000398732 1485 ntBASIC4.98□□□□□ -1.61
LRFN1Q9P244 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
LRFN1Q9P244 AC007938.2-201ENST00000604666 2634 ntBASIC4.98□□□□□ -1.61
LRFN1Q9P244 BCLAF1P2-201ENST00000624956 2609 ntBASIC4.98□□□□□ -1.61
LRFN1Q9P244 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
LRFN1Q9P244 KIAA1841-205ENST00000453873 4294 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
LRFN1Q9P244 MAPK6PS3-201ENST00000403865 2162 ntBASIC4.98□□□□□ -1.61
LRFN1Q9P244 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
LRFN1Q9P244 OAZ3-204ENST00000479764 3789 ntTSL 5 BASIC4.98□□□□□ -1.61
LRFN1Q9P244 AC011493.1-201ENST00000596753 1632 ntBASIC4.97□□□□□ -1.61
LRFN1Q9P244 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC4.97□□□□□ -1.61
LRFN1Q9P244 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
LRFN1Q9P244 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC4.97□□□□□ -1.61
LRFN1Q9P244 AC079601.1-201ENST00000547824 2791 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
LRFN1Q9P244 LINC01478-201ENST00000587877 2068 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
LRFN1Q9P244 SNRPB2-202ENST00000377943 1588 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
LRFN1Q9P244 MLIP-203ENST00000370877 1234 ntAPPRIS ALT2 TSL 5 BASIC4.97□□□□□ -1.61
LRFN1Q9P244 Y_RNA.465-201ENST00000384293 102 ntBASIC4.97□□□□□ -1.61
LRFN1Q9P244 RNA5SP487-201ENST00000410186 122 ntBASIC4.97□□□□□ -1.61
LRFN1Q9P244 FCF1P2-201ENST00000415284 583 ntBASIC4.97□□□□□ -1.61
LRFN1Q9P244 AL596247.1-201ENST00000416076 442 ntTSL 3 BASIC4.97□□□□□ -1.61
LRFN1Q9P244 GCG-202ENST00000418842 1289 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
LRFN1Q9P244 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC4.97□□□□□ -1.61
LRFN1Q9P244 AL133419.1-201ENST00000423153 640 ntTSL 3 BASIC4.97□□□□□ -1.61
LRFN1Q9P244 HSPD1P12-201ENST00000429127 1069 ntBASIC4.97□□□□□ -1.61
LRFN1Q9P244 B3GNT2P1-201ENST00000434960 952 ntBASIC4.97□□□□□ -1.61
LRFN1Q9P244 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC4.97□□□□□ -1.61
LRFN1Q9P244 AL807757.1-201ENST00000437846 424 ntTSL 3 BASIC4.97□□□□□ -1.61
LRFN1Q9P244 RPL23AP76-201ENST00000441860 458 ntBASIC4.97□□□□□ -1.61
LRFN1Q9P244 AP000470.1-201ENST00000448063 693 ntTSL 5 BASIC4.97□□□□□ -1.61
LRFN1Q9P244 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC4.97□□□□□ -1.61
LRFN1Q9P244 AL008723.1-201ENST00000452181 590 ntTSL 5 BASIC4.97□□□□□ -1.61
LRFN1Q9P244 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC4.97□□□□□ -1.61
LRFN1Q9P244 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC4.97□□□□□ -1.61
LRFN1Q9P244 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC4.97□□□□□ -1.61
LRFN1Q9P244 RN7SL222P-201ENST00000476452 299 ntBASIC4.97□□□□□ -1.61
LRFN1Q9P244 RPS18P6-201ENST00000476880 458 ntBASIC4.97□□□□□ -1.61
LRFN1Q9P244 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC4.97□□□□□ -1.61
LRFN1Q9P244 RN7SL808P-201ENST00000496066 299 ntBASIC4.97□□□□□ -1.61
LRFN1Q9P244 RPS17P5-201ENST00000498293 408 ntBASIC4.97□□□□□ -1.61
LRFN1Q9P244 AC010230.1-202ENST00000506265 592 ntTSL 5 BASIC4.97□□□□□ -1.61
LRFN1Q9P244 AC034244.1-201ENST00000507687 207 ntBASIC4.97□□□□□ -1.61
LRFN1Q9P244 AC079380.1-201ENST00000507844 619 ntTSL 3 BASIC4.97□□□□□ -1.61
LRFN1Q9P244 ST13P12-201ENST00000508958 1094 ntBASIC4.97□□□□□ -1.61
LRFN1Q9P244 AC109464.1-201ENST00000511091 819 ntBASIC4.97□□□□□ -1.61
LRFN1Q9P244 AC008837.2-201ENST00000513076 418 ntBASIC4.97□□□□□ -1.61
LRFN1Q9P244 AC138938.1-201ENST00000515431 782 ntBASIC4.97□□□□□ -1.61
LRFN1Q9P244 AF181450.1-201ENST00000522980 410 ntTSL 3 BASIC4.97□□□□□ -1.61
LRFN1Q9P244 ASB8-202ENST00000535055 657 ntTSL 2 BASIC4.97□□□□□ -1.61
LRFN1Q9P244 RERGL-202ENST00000536890 367 ntTSL 3 BASIC4.97□□□□□ -1.61
LRFN1Q9P244 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC4.97□□□□□ -1.61
LRFN1Q9P244 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC4.97□□□□□ -1.61
LRFN1Q9P244 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC4.97□□□□□ -1.61
LRFN1Q9P244 HAGLR-211ENST00000549329 609 ntTSL 4 BASIC4.97□□□□□ -1.61
LRFN1Q9P244 HMGN2P6-201ENST00000551091 273 ntBASIC4.97□□□□□ -1.61
LRFN1Q9P244 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC4.97□□□□□ -1.61
LRFN1Q9P244 AC068446.3-201ENST00000555285 382 ntBASIC4.97□□□□□ -1.61
LRFN1Q9P244 LINS1-207ENST00000560133 1196 ntTSL 2 BASIC4.97□□□□□ -1.61
LRFN1Q9P244 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC4.97□□□□□ -1.61
LRFN1Q9P244 AC011477.5-201ENST00000586571 259 ntBASIC4.97□□□□□ -1.61
LRFN1Q9P244 MRPS35P3-201ENST00000603189 709 ntBASIC4.97□□□□□ -1.61
LRFN1Q9P244 Z99289.3-201ENST00000605586 594 ntBASIC4.97□□□□□ -1.61
LRFN1Q9P244 AL445222.1-201ENST00000607259 628 ntBASIC4.97□□□□□ -1.61
LRFN1Q9P244 AC026634.1-201ENST00000634369 198 ntBASIC4.97□□□□□ -1.61
LRFN1Q9P244 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
LRFN1Q9P244 OR52A5-201ENST00000307388 3973 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
LRFN1Q9P244 MAPK10-304ENST00000641341 3984 ntBASIC4.97□□□□□ -1.61
LRFN1Q9P244 OR52A5-202ENST00000642125 3993 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
LRFN1Q9P244 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
LRFN1Q9P244 EFCAB3-201ENST00000305286 1542 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
LRFN1Q9P244 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
LRFN1Q9P244 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC4.97□□□□□ -1.61
LRFN1Q9P244 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC4.96□□□□□ -1.61
LRFN1Q9P244 IPCEF1-202ENST00000367220 1658 ntAPPRIS ALT2 TSL 2 BASIC4.96□□□□□ -1.61
LRFN1Q9P244 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC4.96□□□□□ -1.62
LRFN1Q9P244 FAM170B-AS1-203ENST00000442525 2000 ntTSL 2 BASIC4.96□□□□□ -1.62
LRFN1Q9P244 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
LRFN1Q9P244 SON-204ENST00000381692 2463 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
LRFN1Q9P244 IFNG-201ENST00000229135 1218 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 94 ms