Protein–RNA interactions for Protein: Q9P219

CCDC88C, Protein Daple, humanhuman

Predictions only

Length 2,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC88CQ9P219 AC242843.1-201ENST00000618702 573 ntBASIC3.95□□□□□ -1.78
CCDC88CQ9P219 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC3.95□□□□□ -1.78
CCDC88CQ9P219 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC3.95□□□□□ -1.78
CCDC88CQ9P219 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
CCDC88CQ9P219 LINC01013-205ENST00000458028 1345 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
CCDC88CQ9P219 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC3.95□□□□□ -1.78
CCDC88CQ9P219 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC3.95□□□□□ -1.78
CCDC88CQ9P219 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC3.95□□□□□ -1.78
CCDC88CQ9P219 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
CCDC88CQ9P219 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC3.95□□□□□ -1.78
CCDC88CQ9P219 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
CCDC88CQ9P219 CEACAMP1-201ENST00000434624 1035 ntBASIC3.95□□□□□ -1.78
CCDC88CQ9P219 NUDT7-202ENST00000437314 930 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
CCDC88CQ9P219 RPSAP41-201ENST00000439695 860 ntBASIC3.95□□□□□ -1.78
CCDC88CQ9P219 AL589765.3-201ENST00000446084 462 ntBASIC3.95□□□□□ -1.78
CCDC88CQ9P219 SNORA84-201ENST00000459229 133 ntBASIC3.95□□□□□ -1.78
CCDC88CQ9P219 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
CCDC88CQ9P219 RPL31P61-201ENST00000496160 376 ntBASIC3.95□□□□□ -1.78
CCDC88CQ9P219 AC099550.1-201ENST00000515495 871 ntTSL 3 BASIC3.95□□□□□ -1.78
CCDC88CQ9P219 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC3.95□□□□□ -1.78
CCDC88CQ9P219 AC115837.2-201ENST00000522127 677 ntTSL 3 BASIC3.95□□□□□ -1.78
CCDC88CQ9P219 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC3.95□□□□□ -1.78
CCDC88CQ9P219 AC073651.3-201ENST00000545999 417 ntTSL 3 BASIC3.95□□□□□ -1.78
CCDC88CQ9P219 AC025175.1-201ENST00000606482 759 ntBASIC3.95□□□□□ -1.78
CCDC88CQ9P219 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC3.95□□□□□ -1.78
CCDC88CQ9P219 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
CCDC88CQ9P219 EED-206ENST00000527888 1422 ntTSL 2 BASIC3.94□□□□□ -1.78
CCDC88CQ9P219 CDC16-202ENST00000252458 1991 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
CCDC88CQ9P219 OR11H4-201ENST00000315409 1082 ntBASIC3.94□□□□□ -1.78
CCDC88CQ9P219 RNU1-64P-201ENST00000365443 163 ntBASIC3.94□□□□□ -1.78
CCDC88CQ9P219 OR2B3-201ENST00000377173 1106 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
CCDC88CQ9P219 AC002524.1-201ENST00000411687 547 ntBASIC3.94□□□□□ -1.78
CCDC88CQ9P219 TRGV7-201ENST00000427089 353 ntBASIC3.94□□□□□ -1.78
CCDC88CQ9P219 RPL23AP46-201ENST00000438548 490 ntBASIC3.94□□□□□ -1.78
CCDC88CQ9P219 ARAFP2-201ENST00000440565 559 ntBASIC3.94□□□□□ -1.78
CCDC88CQ9P219 PRR16-203ENST00000446965 1152 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
CCDC88CQ9P219 AC099509.1-201ENST00000502437 652 ntTSL 2 BASIC3.94□□□□□ -1.78
CCDC88CQ9P219 MTCO1P49-201ENST00000523429 802 ntBASIC3.94□□□□□ -1.78
CCDC88CQ9P219 AP001978.1-201ENST00000526851 834 ntTSL 2 BASIC3.94□□□□□ -1.78
CCDC88CQ9P219 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC3.94□□□□□ -1.78
CCDC88CQ9P219 TWF1-207ENST00000548315 1170 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
CCDC88CQ9P219 BNIP3P5-201ENST00000562290 498 ntBASIC3.94□□□□□ -1.78
CCDC88CQ9P219 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
CCDC88CQ9P219 MTND4P26-201ENST00000415971 1359 ntBASIC3.94□□□□□ -1.78
CCDC88CQ9P219 HMMR-202ENST00000358715 2988 ntAPPRIS P4 TSL 1 (best) BASIC3.94□□□□□ -1.78
CCDC88CQ9P219 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
CCDC88CQ9P219 AC116667.1-201ENST00000604855 2072 ntBASIC3.94□□□□□ -1.78
CCDC88CQ9P219 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
CCDC88CQ9P219 OR2AP1-202ENST00000641114 1548 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
CCDC88CQ9P219 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
CCDC88CQ9P219 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
CCDC88CQ9P219 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC3.94□□□□□ -1.78
CCDC88CQ9P219 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
CCDC88CQ9P219 RNA5SP399-201ENST00000364003 117 ntBASIC3.94□□□□□ -1.78
CCDC88CQ9P219 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC3.94□□□□□ -1.78
CCDC88CQ9P219 SNORA68.2-201ENST00000391263 128 ntBASIC3.94□□□□□ -1.78
CCDC88CQ9P219 SNX10-203ENST00000409367 746 ntTSL 5 BASIC3.94□□□□□ -1.78
CCDC88CQ9P219 CASKP1-201ENST00000412870 582 ntBASIC3.94□□□□□ -1.78
CCDC88CQ9P219 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
CCDC88CQ9P219 RPS11P1-201ENST00000451072 473 ntBASIC3.94□□□□□ -1.78
CCDC88CQ9P219 SUMO2P4-201ENST00000504193 276 ntBASIC3.94□□□□□ -1.78
CCDC88CQ9P219 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC3.94□□□□□ -1.78
CCDC88CQ9P219 AC007991.1-201ENST00000522680 631 ntBASIC3.94□□□□□ -1.78
CCDC88CQ9P219 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC3.94□□□□□ -1.78
CCDC88CQ9P219 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC3.94□□□□□ -1.78
CCDC88CQ9P219 LINC02404-201ENST00000546710 1188 ntTSL 5 BASIC3.94□□□□□ -1.78
CCDC88CQ9P219 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC3.94□□□□□ -1.78
CCDC88CQ9P219 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC3.94□□□□□ -1.78
CCDC88CQ9P219 AC245452.5-201ENST00000620649 780 ntTSL 3 BASIC3.94□□□□□ -1.78
CCDC88CQ9P219 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
CCDC88CQ9P219 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC3.93□□□□□ -1.78
CCDC88CQ9P219 HDGFP1-201ENST00000405943 252 ntBASIC3.93□□□□□ -1.78
CCDC88CQ9P219 METTL5-205ENST00000409837 936 ntAPPRIS ALT1 TSL 1 (best) BASIC3.93□□□□□ -1.78
CCDC88CQ9P219 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC3.93□□□□□ -1.78
CCDC88CQ9P219 MAPRE1P3-201ENST00000435438 796 ntBASIC3.93□□□□□ -1.78
CCDC88CQ9P219 RPS7P7-201ENST00000463499 571 ntBASIC3.93□□□□□ -1.78
CCDC88CQ9P219 RPL5P16-201ENST00000471467 790 ntBASIC3.93□□□□□ -1.78
CCDC88CQ9P219 MED28P5-201ENST00000528254 438 ntBASIC3.93□□□□□ -1.78
CCDC88CQ9P219 SS18L2P2-201ENST00000583960 235 ntBASIC3.93□□□□□ -1.78
CCDC88CQ9P219 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC3.93□□□□□ -1.78
CCDC88CQ9P219 RNU4-89P-201ENST00000607443 133 ntBASIC3.93□□□□□ -1.78
CCDC88CQ9P219 MIR8059-201ENST00000620427 81 ntBASIC3.93□□□□□ -1.78
CCDC88CQ9P219 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
CCDC88CQ9P219 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC3.93□□□□□ -1.78
CCDC88CQ9P219 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
CCDC88CQ9P219 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC3.93□□□□□ -1.78
CCDC88CQ9P219 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC3.93□□□□□ -1.78
CCDC88CQ9P219 MEIOB-205ENST00000470044 1857 ntTSL 2 BASIC3.93□□□□□ -1.78
CCDC88CQ9P219 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.93□□□□□ -1.78
CCDC88CQ9P219 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
CCDC88CQ9P219 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC3.92□□□□□ -1.78
CCDC88CQ9P219 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
CCDC88CQ9P219 RN7SKP227-201ENST00000364445 330 ntBASIC3.92□□□□□ -1.78
CCDC88CQ9P219 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC3.92□□□□□ -1.78
CCDC88CQ9P219 LINC01423-201ENST00000414189 608 ntTSL 3 BASIC3.92□□□□□ -1.78
CCDC88CQ9P219 AL590006.1-201ENST00000417390 752 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
CCDC88CQ9P219 RPL36AP36-201ENST00000418616 301 ntBASIC3.92□□□□□ -1.78
CCDC88CQ9P219 GCG-202ENST00000418842 1289 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
CCDC88CQ9P219 AL389915.1-201ENST00000422463 466 ntBASIC3.92□□□□□ -1.78
CCDC88CQ9P219 AL353748.1-201ENST00000440753 474 ntBASIC3.92□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 127.5 ms