Protein–RNA interactions for Protein: Q9NQG7

HPS4, Hermansky-Pudlak syndrome 4 protein, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4Q9NQG7 AP004372.1-201ENST00000604842 844 ntBASIC4.72□□□□□ -1.65
HPS4Q9NQG7 AC114781.5-201ENST00000615297 108 ntBASIC4.72□□□□□ -1.65
HPS4Q9NQG7 AL596275.2-204ENST00000641628 552 ntBASIC4.72□□□□□ -1.65
HPS4Q9NQG7 AL596275.2-206ENST00000641957 626 ntBASIC4.72□□□□□ -1.65
HPS4Q9NQG7 AL034370.1-201ENST00000397254 1590 ntBASIC4.72□□□□□ -1.65
HPS4Q9NQG7 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
HPS4Q9NQG7 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC4.72□□□□□ -1.65
HPS4Q9NQG7 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC4.72□□□□□ -1.65
HPS4Q9NQG7 AC135352.1-201ENST00000506173 1418 ntBASIC4.72□□□□□ -1.65
HPS4Q9NQG7 DDX18P5-201ENST00000534547 1306 ntBASIC4.72□□□□□ -1.65
HPS4Q9NQG7 ACTR3BP2-202ENST00000623630 1338 ntBASIC4.72□□□□□ -1.65
HPS4Q9NQG7 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.65
HPS4Q9NQG7 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC4.71□□□□□ -1.65
HPS4Q9NQG7 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
HPS4Q9NQG7 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC4.71□□□□□ -1.66
HPS4Q9NQG7 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
HPS4Q9NQG7 NFE2L2-204ENST00000423513 1382 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
HPS4Q9NQG7 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC4.71□□□□□ -1.66
HPS4Q9NQG7 SNORA27.3-201ENST00000364937 134 ntBASIC4.71□□□□□ -1.66
HPS4Q9NQG7 RNU6-146P-201ENST00000384602 108 ntBASIC4.71□□□□□ -1.66
HPS4Q9NQG7 KRTAP3-2-201ENST00000391587 702 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
HPS4Q9NQG7 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
HPS4Q9NQG7 OR6K4P-201ENST00000423179 955 ntBASIC4.71□□□□□ -1.66
HPS4Q9NQG7 RPS29P17-201ENST00000430795 166 ntBASIC4.71□□□□□ -1.66
HPS4Q9NQG7 AC009226.1-201ENST00000432413 539 ntTSL 3 BASIC4.71□□□□□ -1.66
HPS4Q9NQG7 NMNAT1P2-201ENST00000435192 860 ntBASIC4.71□□□□□ -1.66
HPS4Q9NQG7 AL353898.1-201ENST00000444055 238 ntBASIC4.71□□□□□ -1.66
HPS4Q9NQG7 MRPL48P1-201ENST00000445390 636 ntBASIC4.71□□□□□ -1.66
HPS4Q9NQG7 RPS27AP16-201ENST00000492222 470 ntBASIC4.71□□□□□ -1.66
HPS4Q9NQG7 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC4.71□□□□□ -1.66
HPS4Q9NQG7 LINC01060-205ENST00000512839 716 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
HPS4Q9NQG7 SNORD116-26-201ENST00000516006 96 ntBASIC4.71□□□□□ -1.66
HPS4Q9NQG7 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC4.71□□□□□ -1.66
HPS4Q9NQG7 OSGEPL1-AS1-203ENST00000523895 567 ntTSL 4 BASIC4.71□□□□□ -1.66
HPS4Q9NQG7 AL133304.2-201ENST00000546376 886 ntTSL 2 BASIC4.71□□□□□ -1.66
HPS4Q9NQG7 AC092140.1-201ENST00000563090 549 ntTSL 3 BASIC4.71□□□□□ -1.66
HPS4Q9NQG7 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC4.71□□□□□ -1.66
HPS4Q9NQG7 AC090844.2-203ENST00000582263 632 ntTSL 5 BASIC4.71□□□□□ -1.66
HPS4Q9NQG7 OR5R1-201ENST00000623286 975 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
HPS4Q9NQG7 FTO-223ENST00000640179 210 ntTSL 5 BASIC4.71□□□□□ -1.66
HPS4Q9NQG7 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
HPS4Q9NQG7 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC4.71□□□□□ -1.66
HPS4Q9NQG7 AC114546.3-201ENST00000623582 1734 ntBASIC4.71□□□□□ -1.66
HPS4Q9NQG7 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
HPS4Q9NQG7 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC4.71□□□□□ -1.66
HPS4Q9NQG7 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
HPS4Q9NQG7 AL136164.3-201ENST00000624429 3978 ntBASIC4.71□□□□□ -1.66
HPS4Q9NQG7 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
HPS4Q9NQG7 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC4.7□□□□□ -1.66
HPS4Q9NQG7 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
HPS4Q9NQG7 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC4.7□□□□□ -1.66
HPS4Q9NQG7 SPATA2P1-201ENST00000431223 2055 ntBASIC4.7□□□□□ -1.66
HPS4Q9NQG7 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC4.7□□□□□ -1.66
HPS4Q9NQG7 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
HPS4Q9NQG7 RNU6-225P-201ENST00000384613 103 ntBASIC4.7□□□□□ -1.66
HPS4Q9NQG7 AL034374.1-201ENST00000406329 351 ntBASIC4.7□□□□□ -1.66
HPS4Q9NQG7 SVIL-AS1-202ENST00000414457 1243 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
HPS4Q9NQG7 AL391704.2-201ENST00000418379 981 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
HPS4Q9NQG7 CKS1BP6-201ENST00000424932 240 ntBASIC4.7□□□□□ -1.66
HPS4Q9NQG7 IPMKP1-201ENST00000425988 855 ntBASIC4.7□□□□□ -1.66
HPS4Q9NQG7 AP001324.1-201ENST00000428553 399 ntBASIC4.7□□□□□ -1.66
HPS4Q9NQG7 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC4.7□□□□□ -1.66
HPS4Q9NQG7 AL096855.1-202ENST00000444276 439 ntTSL 2 BASIC4.7□□□□□ -1.66
HPS4Q9NQG7 AC009365.2-201ENST00000453078 799 ntTSL 3 BASIC4.7□□□□□ -1.66
HPS4Q9NQG7 RPL7AP52-201ENST00000458096 790 ntBASIC4.7□□□□□ -1.66
HPS4Q9NQG7 RN7SL303P-201ENST00000469773 251 ntBASIC4.7□□□□□ -1.66
HPS4Q9NQG7 CMAHP-205ENST00000471416 1118 ntTSL 2 BASIC4.7□□□□□ -1.66
HPS4Q9NQG7 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
HPS4Q9NQG7 RNU6-889P-201ENST00000517189 103 ntBASIC4.7□□□□□ -1.66
HPS4Q9NQG7 AC090819.1-201ENST00000523800 1111 ntBASIC4.7□□□□□ -1.66
HPS4Q9NQG7 AC022874.1-201ENST00000526382 550 ntTSL 3 BASIC4.7□□□□□ -1.66
HPS4Q9NQG7 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC4.7□□□□□ -1.66
HPS4Q9NQG7 AL049875.1-202ENST00000556620 857 ntTSL 3 BASIC4.7□□□□□ -1.66
HPS4Q9NQG7 PCLAF-203ENST00000558008 766 ntTSL 3 BASIC4.7□□□□□ -1.66
HPS4Q9NQG7 AC087477.6-201ENST00000559595 843 ntBASIC4.7□□□□□ -1.66
HPS4Q9NQG7 HMGB3P26-201ENST00000560051 582 ntBASIC4.7□□□□□ -1.66
HPS4Q9NQG7 AL157938.2-204ENST00000589667 826 ntTSL 5 BASIC4.7□□□□□ -1.66
HPS4Q9NQG7 AC010422.4-201ENST00000601420 533 ntTSL 3 BASIC4.7□□□□□ -1.66
HPS4Q9NQG7 AC010200.2-201ENST00000605098 235 ntBASIC4.7□□□□□ -1.66
HPS4Q9NQG7 ZNF630-AS1-201ENST00000614448 397 ntTSL 3 BASIC4.7□□□□□ -1.66
HPS4Q9NQG7 LINC02335-201ENST00000616578 659 ntTSL 3 BASIC4.7□□□□□ -1.66
HPS4Q9NQG7 AC023490.1-202ENST00000620909 820 ntTSL 5 BASIC4.7□□□□□ -1.66
HPS4Q9NQG7 AP000843.1-201ENST00000624880 701 ntBASIC4.7□□□□□ -1.66
HPS4Q9NQG7 OR5AC4P-202ENST00000642086 985 ntBASIC4.7□□□□□ -1.66
HPS4Q9NQG7 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
HPS4Q9NQG7 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
HPS4Q9NQG7 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC4.7□□□□□ -1.66
HPS4Q9NQG7 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
HPS4Q9NQG7 ZC3H14-215ENST00000555900 1762 ntTSL 5 BASIC4.7□□□□□ -1.66
HPS4Q9NQG7 CASC19-206ENST00000641028 1430 ntBASIC4.7□□□□□ -1.66
HPS4Q9NQG7 AC092435.4-201ENST00000623012 4159 ntBASIC4.7□□□□□ -1.66
HPS4Q9NQG7 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
HPS4Q9NQG7 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
HPS4Q9NQG7 PHF11-215ENST00000488958 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
HPS4Q9NQG7 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
HPS4Q9NQG7 DHX9P1-201ENST00000436565 3076 ntBASIC4.69□□□□□ -1.66
HPS4Q9NQG7 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
HPS4Q9NQG7 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
HPS4Q9NQG7 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
HPS4Q9NQG7 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 113 ms