Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC4.78□□□□□ -1.64
BRF2Q9HAW0 HMGB3P16-201ENST00000508037 287 ntBASIC4.78□□□□□ -1.64
BRF2Q9HAW0 AC118282.2-201ENST00000508739 374 ntBASIC4.78□□□□□ -1.64
BRF2Q9HAW0 Y_RNA.719-201ENST00000517156 106 ntBASIC4.78□□□□□ -1.64
BRF2Q9HAW0 AP001207.2-201ENST00000519490 539 ntBASIC4.78□□□□□ -1.64
BRF2Q9HAW0 ZFAND1-208ENST00000519523 698 ntTSL 2 BASIC4.78□□□□□ -1.64
BRF2Q9HAW0 AC022790.1-201ENST00000522872 204 ntBASIC4.78□□□□□ -1.64
BRF2Q9HAW0 UQCRB-209ENST00000523920 695 ntTSL 5 BASIC4.78□□□□□ -1.64
BRF2Q9HAW0 OR7E128P-201ENST00000532736 1024 ntBASIC4.78□□□□□ -1.64
BRF2Q9HAW0 TEX49-202ENST00000548380 573 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
BRF2Q9HAW0 AC063949.1-201ENST00000552900 865 ntBASIC4.78□□□□□ -1.64
BRF2Q9HAW0 AC015660.2-201ENST00000561362 323 ntTSL 3 BASIC4.78□□□□□ -1.64
BRF2Q9HAW0 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
BRF2Q9HAW0 AC027455.1-201ENST00000574104 594 ntBASIC4.78□□□□□ -1.64
BRF2Q9HAW0 AC005702.2-201ENST00000591035 481 ntAPPRIS P1 TSL 3 BASIC4.78□□□□□ -1.64
BRF2Q9HAW0 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC4.78□□□□□ -1.64
BRF2Q9HAW0 AL392112.1-201ENST00000605115 829 ntBASIC4.78□□□□□ -1.64
BRF2Q9HAW0 AC009163.6-201ENST00000612367 342 ntBASIC4.78□□□□□ -1.64
BRF2Q9HAW0 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC4.78□□□□□ -1.64
BRF2Q9HAW0 AL049794.2-201ENST00000616301 365 ntBASIC4.78□□□□□ -1.64
BRF2Q9HAW0 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC4.78□□□□□ -1.64
BRF2Q9HAW0 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC4.78□□□□□ -1.64
BRF2Q9HAW0 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
BRF2Q9HAW0 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
BRF2Q9HAW0 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC4.78□□□□□ -1.64
BRF2Q9HAW0 XPOTP1-201ENST00000443317 2398 ntBASIC4.78□□□□□ -1.64
BRF2Q9HAW0 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
BRF2Q9HAW0 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
BRF2Q9HAW0 SMG1P4-204ENST00000523028 4131 ntBASIC4.78□□□□□ -1.64
BRF2Q9HAW0 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC4.77□□□□□ -1.65
BRF2Q9HAW0 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC4.77□□□□□ -1.65
BRF2Q9HAW0 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
BRF2Q9HAW0 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
BRF2Q9HAW0 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
BRF2Q9HAW0 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
BRF2Q9HAW0 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC4.77□□□□□ -1.65
BRF2Q9HAW0 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
BRF2Q9HAW0 TAS2R8-201ENST00000240615 1243 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
BRF2Q9HAW0 CSTA-201ENST00000264474 751 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
BRF2Q9HAW0 SNURFL-201ENST00000309296 343 ntBASIC4.77□□□□□ -1.65
BRF2Q9HAW0 AMELX-201ENST00000348912 737 ntTSL 5 BASIC4.77□□□□□ -1.65
BRF2Q9HAW0 CARD16-201ENST00000375704 613 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
BRF2Q9HAW0 SNORA70.10-201ENST00000384515 134 ntBASIC4.77□□□□□ -1.65
BRF2Q9HAW0 ANAPC10P1-201ENST00000395991 556 ntBASIC4.77□□□□□ -1.65
BRF2Q9HAW0 Z97832.1-201ENST00000402490 328 ntBASIC4.77□□□□□ -1.65
BRF2Q9HAW0 RNU6ATAC21P-201ENST00000408656 126 ntBASIC4.77□□□□□ -1.65
BRF2Q9HAW0 OR51A3P-201ENST00000413596 924 ntBASIC4.77□□□□□ -1.65
BRF2Q9HAW0 MTATP6P20-201ENST00000414147 562 ntBASIC4.77□□□□□ -1.65
BRF2Q9HAW0 AL391069.1-201ENST00000422153 358 ntTSL 3 BASIC4.77□□□□□ -1.65
BRF2Q9HAW0 NANOGP5-201ENST00000424456 877 ntBASIC4.77□□□□□ -1.65
BRF2Q9HAW0 LINC01400-201ENST00000426358 947 ntTSL 3 BASIC4.77□□□□□ -1.65
BRF2Q9HAW0 USP12PY-201ENST00000427677 1064 ntBASIC4.77□□□□□ -1.65
BRF2Q9HAW0 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC4.77□□□□□ -1.65
BRF2Q9HAW0 AL451070.1-201ENST00000430143 439 ntTSL 5 BASIC4.77□□□□□ -1.65
BRF2Q9HAW0 LINC01506-201ENST00000432148 495 ntTSL 2 BASIC4.77□□□□□ -1.65
BRF2Q9HAW0 ANKRD30BP3-201ENST00000444850 1070 ntBASIC4.77□□□□□ -1.65
BRF2Q9HAW0 RHEBP2-201ENST00000450289 600 ntBASIC4.77□□□□□ -1.65
BRF2Q9HAW0 AL160408.1-203ENST00000453568 631 ntTSL 5 BASIC4.77□□□□□ -1.65
BRF2Q9HAW0 NAP1L1P3-201ENST00000462291 880 ntBASIC4.77□□□□□ -1.65
BRF2Q9HAW0 RN7SL222P-201ENST00000476452 299 ntBASIC4.77□□□□□ -1.65
BRF2Q9HAW0 HMGN2P25-201ENST00000486956 268 ntBASIC4.77□□□□□ -1.65
BRF2Q9HAW0 RN7SL244P-201ENST00000493405 297 ntBASIC4.77□□□□□ -1.65
BRF2Q9HAW0 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC4.77□□□□□ -1.65
BRF2Q9HAW0 AC139491.3-201ENST00000509643 684 ntTSL 3 BASIC4.77□□□□□ -1.65
BRF2Q9HAW0 AC008728.1-201ENST00000512730 691 ntTSL 2 BASIC4.77□□□□□ -1.65
BRF2Q9HAW0 TCP11X3P-202ENST00000514289 1254 ntBASIC4.77□□□□□ -1.65
BRF2Q9HAW0 RNU6-416P-201ENST00000516265 103 ntBASIC4.77□□□□□ -1.65
BRF2Q9HAW0 snoZ278.1-201ENST00000517059 112 ntBASIC4.77□□□□□ -1.65
BRF2Q9HAW0 AC062004.1-201ENST00000518706 686 ntTSL 3 BASIC4.77□□□□□ -1.65
BRF2Q9HAW0 VNN2-207ENST00000525289 900 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
BRF2Q9HAW0 AC022832.1-201ENST00000530718 645 ntBASIC4.77□□□□□ -1.65
BRF2Q9HAW0 AL133330.2-201ENST00000532760 776 ntTSL 2 BASIC4.77□□□□□ -1.65
BRF2Q9HAW0 AP001360.2-201ENST00000534423 562 ntTSL 4 BASIC4.77□□□□□ -1.65
BRF2Q9HAW0 AC130404.1-201ENST00000539362 739 ntTSL 2 BASIC4.77□□□□□ -1.65
BRF2Q9HAW0 AC011595.3-201ENST00000546699 632 ntTSL 3 BASIC4.77□□□□□ -1.65
BRF2Q9HAW0 AL132857.1-201ENST00000555180 708 ntBASIC4.77□□□□□ -1.65
BRF2Q9HAW0 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC4.77□□□□□ -1.65
BRF2Q9HAW0 AC011824.2-203ENST00000579975 633 ntTSL 3 BASIC4.77□□□□□ -1.65
BRF2Q9HAW0 MOCS2-209ENST00000582677 741 ntTSL 5 BASIC4.77□□□□□ -1.65
BRF2Q9HAW0 AC005324.5-201ENST00000584540 571 ntTSL 5 BASIC4.77□□□□□ -1.65
BRF2Q9HAW0 AL160237.3-201ENST00000604114 1013 ntBASIC4.77□□□□□ -1.65
BRF2Q9HAW0 TAS2R6P-201ENST00000605022 826 ntBASIC4.77□□□□□ -1.65
BRF2Q9HAW0 AL365400.2-201ENST00000605604 902 ntBASIC4.77□□□□□ -1.65
BRF2Q9HAW0 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC4.77□□□□□ -1.65
BRF2Q9HAW0 VN1R7P-201ENST00000619242 903 ntBASIC4.77□□□□□ -1.65
BRF2Q9HAW0 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
BRF2Q9HAW0 DUXB-201ENST00000633875 1079 ntAPPRIS P1 TSL 3 BASIC4.77□□□□□ -1.65
BRF2Q9HAW0 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC4.77□□□□□ -1.65
BRF2Q9HAW0 ZNF663P-202ENST00000641770 1131 ntBASIC4.77□□□□□ -1.65
BRF2Q9HAW0 ZFAND6-213ENST00000559835 1446 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
BRF2Q9HAW0 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
BRF2Q9HAW0 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC4.77□□□□□ -1.65
BRF2Q9HAW0 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC4.77□□□□□ -1.65
BRF2Q9HAW0 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
BRF2Q9HAW0 IL13RA2-201ENST00000243213 1371 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
BRF2Q9HAW0 EEF1A1P36-201ENST00000427807 1351 ntBASIC4.77□□□□□ -1.65
BRF2Q9HAW0 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
BRF2Q9HAW0 AC022893.2-201ENST00000564832 3296 ntBASIC4.77□□□□□ -1.65
BRF2Q9HAW0 AL022393.1-201ENST00000625142 1677 ntBASIC4.77□□□□□ -1.65
BRF2Q9HAW0 CCDC178-209ENST00000579947 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 85.3 ms