Protein–RNA interactions for Protein: Q9H4D5

NXF3, Nuclear RNA export factor 3, humanhuman

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NXF3Q9H4D5 AL117339.2-201ENST00000430475 180 ntBASIC4.56□□□□□ -1.68
NXF3Q9H4D5 KCTD10P1-201ENST00000434203 625 ntBASIC4.56□□□□□ -1.68
NXF3Q9H4D5 HMGB3P10-201ENST00000434734 572 ntBASIC4.56□□□□□ -1.68
NXF3Q9H4D5 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC4.56□□□□□ -1.68
NXF3Q9H4D5 MTND4LP12-201ENST00000448237 295 ntBASIC4.56□□□□□ -1.68
NXF3Q9H4D5 ABCF2P2-201ENST00000450549 296 ntBASIC4.56□□□□□ -1.68
NXF3Q9H4D5 RNA5SP246-201ENST00000458909 119 ntBASIC4.56□□□□□ -1.68
NXF3Q9H4D5 RPL21P6-201ENST00000479171 504 ntBASIC4.56□□□□□ -1.68
NXF3Q9H4D5 AL132838.2-201ENST00000492041 314 ntBASIC4.56□□□□□ -1.68
NXF3Q9H4D5 AC099550.1-201ENST00000515495 871 ntTSL 3 BASIC4.56□□□□□ -1.68
NXF3Q9H4D5 RNA5SP360-201ENST00000516555 118 ntBASIC4.56□□□□□ -1.68
NXF3Q9H4D5 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC4.56□□□□□ -1.68
NXF3Q9H4D5 AL355096.1-201ENST00000553561 447 ntTSL 3 BASIC4.56□□□□□ -1.68
NXF3Q9H4D5 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC4.56□□□□□ -1.68
NXF3Q9H4D5 HYKK-203ENST00000563233 734 ntTSL 2 BASIC4.56□□□□□ -1.68
NXF3Q9H4D5 MAPKAPK5-AS1-205ENST00000590479 543 ntTSL 2 BASIC4.56□□□□□ -1.68
NXF3Q9H4D5 AC019278.1-201ENST00000623516 479 ntBASIC4.56□□□□□ -1.68
NXF3Q9H4D5 AC112484.5-201ENST00000624189 228 ntBASIC4.56□□□□□ -1.68
NXF3Q9H4D5 AP002967.1-201ENST00000624203 539 ntBASIC4.56□□□□□ -1.68
NXF3Q9H4D5 AC010608.2-201ENST00000624830 470 ntBASIC4.56□□□□□ -1.68
NXF3Q9H4D5 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC4.56□□□□□ -1.68
NXF3Q9H4D5 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC4.56□□□□□ -1.68
NXF3Q9H4D5 UGT2B17-201ENST00000317746 2077 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
NXF3Q9H4D5 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC4.56□□□□□ -1.68
NXF3Q9H4D5 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC4.56□□□□□ -1.68
NXF3Q9H4D5 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC4.56□□□□□ -1.68
NXF3Q9H4D5 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC4.56□□□□□ -1.68
NXF3Q9H4D5 RMDN2-207ENST00000417700 1426 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
NXF3Q9H4D5 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC4.55□□□□□ -1.68
NXF3Q9H4D5 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
NXF3Q9H4D5 RLIMP1-201ENST00000339626 1680 ntBASIC4.55□□□□□ -1.68
NXF3Q9H4D5 BCLAF1P2-201ENST00000624956 2609 ntBASIC4.55□□□□□ -1.68
NXF3Q9H4D5 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
NXF3Q9H4D5 PPIAP31-201ENST00000405422 495 ntBASIC4.55□□□□□ -1.68
NXF3Q9H4D5 RPL21P65-201ENST00000406094 466 ntBASIC4.55□□□□□ -1.68
NXF3Q9H4D5 RAB9AP4-201ENST00000415230 609 ntBASIC4.55□□□□□ -1.68
NXF3Q9H4D5 POU6F2-AS1-201ENST00000433519 381 ntTSL 3 BASIC4.55□□□□□ -1.68
NXF3Q9H4D5 RPL23AP46-201ENST00000438548 490 ntBASIC4.55□□□□□ -1.68
NXF3Q9H4D5 MTND6P18-201ENST00000439477 513 ntBASIC4.55□□□□□ -1.68
NXF3Q9H4D5 ARL4AP3-201ENST00000441452 574 ntBASIC4.55□□□□□ -1.68
NXF3Q9H4D5 MTCO3P17-201ENST00000443775 513 ntBASIC4.55□□□□□ -1.68
NXF3Q9H4D5 AC000124.1-201ENST00000448311 957 ntTSL 2 BASIC4.55□□□□□ -1.68
NXF3Q9H4D5 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC4.55□□□□□ -1.68
NXF3Q9H4D5 RN7SL604P-201ENST00000492589 296 ntBASIC4.55□□□□□ -1.68
NXF3Q9H4D5 AC034234.1-201ENST00000502993 465 ntTSL 3 BASIC4.55□□□□□ -1.68
NXF3Q9H4D5 AC093824.1-201ENST00000508796 343 ntBASIC4.55□□□□□ -1.68
NXF3Q9H4D5 TCP11X3P-202ENST00000514289 1254 ntBASIC4.55□□□□□ -1.68
NXF3Q9H4D5 AP003472.2-201ENST00000523554 639 ntTSL 3 BASIC4.55□□□□□ -1.68
NXF3Q9H4D5 AP001528.2-201ENST00000528660 1156 ntTSL 5 BASIC4.55□□□□□ -1.68
NXF3Q9H4D5 NAV2-AS3-201ENST00000534036 598 ntTSL 3 BASIC4.55□□□□□ -1.68
NXF3Q9H4D5 AP000462.1-201ENST00000535704 818 ntTSL 3 BASIC4.55□□□□□ -1.68
NXF3Q9H4D5 OR8R1P-201ENST00000543943 764 ntBASIC4.55□□□□□ -1.68
NXF3Q9H4D5 AC106785.1-201ENST00000565935 262 ntBASIC4.55□□□□□ -1.68
NXF3Q9H4D5 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC4.55□□□□□ -1.68
NXF3Q9H4D5 AC006270.1-201ENST00000582889 478 ntTSL 3 BASIC4.55□□□□□ -1.68
NXF3Q9H4D5 AP001542.3-201ENST00000587619 527 ntTSL 5 BASIC4.55□□□□□ -1.68
NXF3Q9H4D5 RNU4-89P-201ENST00000607443 133 ntBASIC4.55□□□□□ -1.68
NXF3Q9H4D5 AL138721.1-201ENST00000616756 179 ntBASIC4.55□□□□□ -1.68
NXF3Q9H4D5 MIR7151-201ENST00000617477 60 ntBASIC4.55□□□□□ -1.68
NXF3Q9H4D5 ZNF93-209ENST00000638737 1020 ntTSL 5 BASIC4.55□□□□□ -1.68
NXF3Q9H4D5 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC4.55□□□□□ -1.68
NXF3Q9H4D5 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
NXF3Q9H4D5 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
NXF3Q9H4D5 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC4.55□□□□□ -1.68
NXF3Q9H4D5 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
NXF3Q9H4D5 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
NXF3Q9H4D5 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC4.55□□□□□ -1.68
NXF3Q9H4D5 DDX18P3-201ENST00000404856 2007 ntBASIC4.55□□□□□ -1.68
NXF3Q9H4D5 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC4.55□□□□□ -1.68
NXF3Q9H4D5 HGF-202ENST00000354224 1425 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
NXF3Q9H4D5 CD86-203ENST00000393627 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
NXF3Q9H4D5 DDX18P4-201ENST00000511690 1966 ntBASIC4.54□□□□□ -1.68
NXF3Q9H4D5 AC000123.3-201ENST00000624029 4975 ntBASIC4.54□□□□□ -1.68
NXF3Q9H4D5 HSPA8P17-201ENST00000427029 1382 ntBASIC4.54□□□□□ -1.68
NXF3Q9H4D5 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
NXF3Q9H4D5 Z95327.2-201ENST00000414579 1873 ntBASIC4.54□□□□□ -1.68
NXF3Q9H4D5 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
NXF3Q9H4D5 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
NXF3Q9H4D5 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
NXF3Q9H4D5 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
NXF3Q9H4D5 MIR1179-201ENST00000408703 91 ntBASIC4.54□□□□□ -1.68
NXF3Q9H4D5 CASKP1-201ENST00000412870 582 ntBASIC4.54□□□□□ -1.68
NXF3Q9H4D5 AC009237.10-201ENST00000414112 510 ntBASIC4.54□□□□□ -1.68
NXF3Q9H4D5 AC108032.1-201ENST00000416706 207 ntBASIC4.54□□□□□ -1.68
NXF3Q9H4D5 MAP1LC3BP1-201ENST00000417653 379 ntBASIC4.54□□□□□ -1.68
NXF3Q9H4D5 LINC02013-201ENST00000438156 526 ntTSL 2 BASIC4.54□□□□□ -1.68
NXF3Q9H4D5 AL162151.2-201ENST00000448875 158 ntBASIC4.54□□□□□ -1.68
NXF3Q9H4D5 PDCD10-206ENST00000470131 1026 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
NXF3Q9H4D5 AC108145.1-201ENST00000503770 153 ntBASIC4.54□□□□□ -1.68
NXF3Q9H4D5 AC091917.2-201ENST00000505002 744 ntBASIC4.54□□□□□ -1.68
NXF3Q9H4D5 AC108064.1-201ENST00000513791 460 ntBASIC4.54□□□□□ -1.68
NXF3Q9H4D5 NPM1P52-201ENST00000518264 846 ntBASIC4.54□□□□□ -1.68
NXF3Q9H4D5 AL121839.1-201ENST00000556233 1185 ntBASIC4.54□□□□□ -1.68
NXF3Q9H4D5 RPL21P7-201ENST00000557463 483 ntBASIC4.54□□□□□ -1.68
NXF3Q9H4D5 AC027176.2-201ENST00000559166 746 ntBASIC4.54□□□□□ -1.68
NXF3Q9H4D5 AMZ2-204ENST00000577273 895 ntTSL 5 BASIC4.54□□□□□ -1.68
NXF3Q9H4D5 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC4.54□□□□□ -1.68
NXF3Q9H4D5 AC010998.2-201ENST00000605549 625 ntTSL 5 BASIC4.54□□□□□ -1.68
NXF3Q9H4D5 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
NXF3Q9H4D5 LINC02342-201ENST00000627910 461 ntTSL 5 BASIC4.54□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 200.1 ms