Protein–RNA interactions for Protein: Q9BY43

CHMP4A, Charged multivesicular body protein 4a, humanhuman

Predictions only

Length 222 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4AQ9BY43 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC6.27□□□□□ -1.4
CHMP4AQ9BY43 AC026951.1-201ENST00000559530 2459 ntBASIC6.27□□□□□ -1.4
CHMP4AQ9BY43 AC008432.1-201ENST00000615912 1320 ntBASIC6.27□□□□□ -1.41
CHMP4AQ9BY43 CREM-206ENST00000354759 1589 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
CHMP4AQ9BY43 MED23-203ENST00000368058 4576 ntTSL 5 BASIC6.27□□□□□ -1.41
CHMP4AQ9BY43 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC6.27□□□□□ -1.41
CHMP4AQ9BY43 IRF5P1-201ENST00000504852 2164 ntBASIC6.27□□□□□ -1.41
CHMP4AQ9BY43 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC6.27□□□□□ -1.41
CHMP4AQ9BY43 ZFAND6-213ENST00000559835 1446 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
CHMP4AQ9BY43 MAPK10-320ENST00000641462 6696 ntBASIC6.27□□□□□ -1.41
CHMP4AQ9BY43 AC068446.1-201ENST00000556425 1549 ntBASIC6.27□□□□□ -1.41
CHMP4AQ9BY43 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC6.27□□□□□ -1.41
CHMP4AQ9BY43 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC6.27□□□□□ -1.41
CHMP4AQ9BY43 RPL9-201ENST00000295955 750 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
CHMP4AQ9BY43 SNORA70E-201ENST00000384492 135 ntBASIC6.27□□□□□ -1.41
CHMP4AQ9BY43 SNORA11B-201ENST00000408175 129 ntBASIC6.27□□□□□ -1.41
CHMP4AQ9BY43 METTL5-205ENST00000409837 936 ntAPPRIS ALT1 TSL 1 (best) BASIC6.27□□□□□ -1.41
CHMP4AQ9BY43 LINC01945-201ENST00000419784 840 ntTSL 2 BASIC6.27□□□□□ -1.41
CHMP4AQ9BY43 AL360093.1-201ENST00000420237 1126 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
CHMP4AQ9BY43 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC6.27□□□□□ -1.41
CHMP4AQ9BY43 RPL7P4-203ENST00000430239 730 ntBASIC6.27□□□□□ -1.41
CHMP4AQ9BY43 AC006055.1-201ENST00000432423 411 ntTSL 3 BASIC6.27□□□□□ -1.41
CHMP4AQ9BY43 AL451139.1-201ENST00000434718 346 ntBASIC6.27□□□□□ -1.41
CHMP4AQ9BY43 AC007179.2-204ENST00000444001 765 ntTSL 3 BASIC6.27□□□□□ -1.41
CHMP4AQ9BY43 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC6.27□□□□□ -1.41
CHMP4AQ9BY43 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC6.27□□□□□ -1.41
CHMP4AQ9BY43 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC6.27□□□□□ -1.41
CHMP4AQ9BY43 HMGB1P19-201ENST00000517578 577 ntBASIC6.27□□□□□ -1.41
CHMP4AQ9BY43 AL442163.2-201ENST00000553912 710 ntBASIC6.27□□□□□ -1.41
CHMP4AQ9BY43 AC104229.1-201ENST00000561364 255 ntBASIC6.27□□□□□ -1.41
CHMP4AQ9BY43 MIR4660-201ENST00000583549 74 ntBASIC6.27□□□□□ -1.41
CHMP4AQ9BY43 CERS6-AS1-204ENST00000599361 536 ntTSL 4 BASIC6.27□□□□□ -1.41
CHMP4AQ9BY43 MTRNR2L12-201ENST00000600213 1049 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
CHMP4AQ9BY43 LINC01930-201ENST00000602672 870 ntTSL 5 BASIC6.27□□□□□ -1.41
CHMP4AQ9BY43 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC6.27□□□□□ -1.41
CHMP4AQ9BY43 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC6.27□□□□□ -1.41
CHMP4AQ9BY43 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC6.27□□□□□ -1.41
CHMP4AQ9BY43 AC073342.3-201ENST00000624211 193 ntBASIC6.27□□□□□ -1.41
CHMP4AQ9BY43 AP003400.6-201ENST00000624698 740 ntBASIC6.27□□□□□ -1.41
CHMP4AQ9BY43 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC6.27□□□□□ -1.41
CHMP4AQ9BY43 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC6.27□□□□□ -1.41
CHMP4AQ9BY43 AL365214.2-201ENST00000433684 1365 ntTSL 2 BASIC6.27□□□□□ -1.41
CHMP4AQ9BY43 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC6.27□□□□□ -1.41
CHMP4AQ9BY43 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC6.27□□□□□ -1.41
CHMP4AQ9BY43 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
CHMP4AQ9BY43 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC6.27□□□□□ -1.41
CHMP4AQ9BY43 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
CHMP4AQ9BY43 AC011447.7-201ENST00000624228 1590 ntBASIC6.27□□□□□ -1.41
CHMP4AQ9BY43 AC008505.1-201ENST00000637582 2025 ntTSL 5 BASIC6.26□□□□□ -1.41
CHMP4AQ9BY43 MAPK10-286ENST00000641208 8747 ntBASIC6.26□□□□□ -1.41
CHMP4AQ9BY43 AC139713.2-209ENST00000509873 1303 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
CHMP4AQ9BY43 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC6.26□□□□□ -1.41
CHMP4AQ9BY43 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC6.26□□□□□ -1.41
CHMP4AQ9BY43 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
CHMP4AQ9BY43 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
CHMP4AQ9BY43 RNU6-609P-201ENST00000365459 107 ntBASIC6.26□□□□□ -1.41
CHMP4AQ9BY43 RNU6-650P-201ENST00000365658 111 ntBASIC6.26□□□□□ -1.41
CHMP4AQ9BY43 SAMD13-204ENST00000370671 724 ntTSL 3 BASIC6.26□□□□□ -1.41
CHMP4AQ9BY43 RN7SKP100-201ENST00000411258 284 ntBASIC6.26□□□□□ -1.41
CHMP4AQ9BY43 BX510359.2-201ENST00000417920 305 ntBASIC6.26□□□□□ -1.41
CHMP4AQ9BY43 AC005165.1-203ENST00000423689 1281 ntTSL 3 BASIC6.26□□□□□ -1.41
CHMP4AQ9BY43 NRBF2P3-201ENST00000432731 865 ntBASIC6.26□□□□□ -1.41
CHMP4AQ9BY43 FAM237A-201ENST00000441223 773 ntAPPRIS P1 TSL 2 BASIC6.26□□□□□ -1.41
CHMP4AQ9BY43 LINC00412-201ENST00000444744 420 ntTSL 2 BASIC6.26□□□□□ -1.41
CHMP4AQ9BY43 MRPL48P1-201ENST00000445390 636 ntBASIC6.26□□□□□ -1.41
CHMP4AQ9BY43 AC092905.1-201ENST00000467527 949 ntBASIC6.26□□□□□ -1.41
CHMP4AQ9BY43 APOA2-207ENST00000470459 416 ntTSL 5 BASIC6.26□□□□□ -1.41
CHMP4AQ9BY43 AL035454.1-201ENST00000470758 433 ntTSL 3 BASIC6.26□□□□□ -1.41
CHMP4AQ9BY43 AC126121.1-201ENST00000482313 553 ntBASIC6.26□□□□□ -1.41
CHMP4AQ9BY43 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC6.26□□□□□ -1.41
CHMP4AQ9BY43 AC011005.3-201ENST00000491624 395 ntBASIC6.26□□□□□ -1.41
CHMP4AQ9BY43 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
CHMP4AQ9BY43 NIFKP7-201ENST00000503365 834 ntBASIC6.26□□□□□ -1.41
CHMP4AQ9BY43 SNX5P1-201ENST00000505757 1041 ntBASIC6.26□□□□□ -1.41
CHMP4AQ9BY43 AC090071.1-201ENST00000507713 644 ntBASIC6.26□□□□□ -1.41
CHMP4AQ9BY43 AC021180.1-201ENST00000508581 558 ntTSL 4 BASIC6.26□□□□□ -1.41
CHMP4AQ9BY43 AC008885.2-201ENST00000509506 930 ntBASIC6.26□□□□□ -1.41
CHMP4AQ9BY43 AC069272.1-201ENST00000514843 680 ntTSL 3 BASIC6.26□□□□□ -1.41
CHMP4AQ9BY43 RNU1-6P-201ENST00000516290 144 ntBASIC6.26□□□□□ -1.41
CHMP4AQ9BY43 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC6.26□□□□□ -1.41
CHMP4AQ9BY43 AC124068.1-201ENST00000563131 678 ntBASIC6.26□□□□□ -1.41
CHMP4AQ9BY43 AC106734.1-201ENST00000568646 663 ntBASIC6.26□□□□□ -1.41
CHMP4AQ9BY43 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
CHMP4AQ9BY43 ZNF92P2-201ENST00000600543 1059 ntBASIC6.26□□□□□ -1.41
CHMP4AQ9BY43 AC024075.3-201ENST00000601687 453 ntTSL 5 BASIC6.26□□□□□ -1.41
CHMP4AQ9BY43 AC104785.1-201ENST00000603220 588 ntBASIC6.26□□□□□ -1.41
CHMP4AQ9BY43 AC233280.2-201ENST00000603917 1070 ntBASIC6.26□□□□□ -1.41
CHMP4AQ9BY43 AL031320.1-201ENST00000604177 357 ntBASIC6.26□□□□□ -1.41
CHMP4AQ9BY43 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC6.26□□□□□ -1.41
CHMP4AQ9BY43 Mico1.1-201ENST00000611698 204 ntBASIC6.26□□□□□ -1.41
CHMP4AQ9BY43 AL359535.1-201ENST00000612100 1087 ntBASIC6.26□□□□□ -1.41
CHMP4AQ9BY43 FRG1EP-201ENST00000634469 770 ntBASIC6.26□□□□□ -1.41
CHMP4AQ9BY43 OR4A15-202ENST00000641526 945 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
CHMP4AQ9BY43 AL596275.2-204ENST00000641628 552 ntBASIC6.26□□□□□ -1.41
CHMP4AQ9BY43 AL596275.2-206ENST00000641957 626 ntBASIC6.26□□□□□ -1.41
CHMP4AQ9BY43 NCLP2-201ENST00000416078 1462 ntBASIC6.26□□□□□ -1.41
CHMP4AQ9BY43 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
CHMP4AQ9BY43 USP8-204ENST00000425032 3559 ntTSL 2 BASIC6.26□□□□□ -1.41
CHMP4AQ9BY43 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC6.25□□□□□ -1.41
CHMP4AQ9BY43 AC011755.1-201ENST00000623763 2049 ntBASIC6.25□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 85.9 ms