Protein–RNA interactions for Protein: Q9BSH5

HDHD3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3Q9BSH5 LMNTD1-202ENST00000413632 1520 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
HDHD3Q9BSH5 LINC01192-202ENST00000470546 1519 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
HDHD3Q9BSH5 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC3.59□□□□□ -1.83
HDHD3Q9BSH5 AL592182.3-201ENST00000642132 3304 ntBASIC3.59□□□□□ -1.83
HDHD3Q9BSH5 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
HDHD3Q9BSH5 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC3.59□□□□□ -1.83
HDHD3Q9BSH5 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC3.59□□□□□ -1.83
HDHD3Q9BSH5 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC3.59□□□□□ -1.83
HDHD3Q9BSH5 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.83
HDHD3Q9BSH5 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC3.59□□□□□ -1.83
HDHD3Q9BSH5 MGST1-201ENST00000010404 901 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.83
HDHD3Q9BSH5 OR10J6P-201ENST00000289731 930 ntBASIC3.59□□□□□ -1.83
HDHD3Q9BSH5 OR5T3-202ENST00000313033 969 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
HDHD3Q9BSH5 MIR331-201ENST00000362302 94 ntBASIC3.59□□□□□ -1.83
HDHD3Q9BSH5 RNA5SP175-201ENST00000364275 119 ntBASIC3.59□□□□□ -1.83
HDHD3Q9BSH5 RN7SKP269-201ENST00000365545 319 ntBASIC3.59□□□□□ -1.83
HDHD3Q9BSH5 RNA5SP87-201ENST00000384155 118 ntBASIC3.59□□□□□ -1.83
HDHD3Q9BSH5 MGST1-203ENST00000396207 909 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
HDHD3Q9BSH5 AP000357.1-201ENST00000409926 1165 ntBASIC3.59□□□□□ -1.83
HDHD3Q9BSH5 RN7SKP278-201ENST00000410504 342 ntBASIC3.59□□□□□ -1.83
HDHD3Q9BSH5 RNA5SP306-201ENST00000411087 107 ntBASIC3.59□□□□□ -1.83
HDHD3Q9BSH5 RPL26P37-201ENST00000411983 438 ntBASIC3.59□□□□□ -1.83
HDHD3Q9BSH5 TMSB10P2-201ENST00000416049 131 ntBASIC3.59□□□□□ -1.83
HDHD3Q9BSH5 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
HDHD3Q9BSH5 LINC01507-201ENST00000417801 446 ntTSL 5 BASIC3.59□□□□□ -1.83
HDHD3Q9BSH5 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
HDHD3Q9BSH5 RBMY1KP-201ENST00000423480 476 ntBASIC3.59□□□□□ -1.83
HDHD3Q9BSH5 AL360081.1-201ENST00000428299 555 ntBASIC3.59□□□□□ -1.83
HDHD3Q9BSH5 AL451140.1-201ENST00000430534 371 ntTSL 3 BASIC3.59□□□□□ -1.83
HDHD3Q9BSH5 ELOCP8-201ENST00000439309 332 ntBASIC3.59□□□□□ -1.83
HDHD3Q9BSH5 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
HDHD3Q9BSH5 ELOCP15-201ENST00000442090 332 ntBASIC3.59□□□□□ -1.83
HDHD3Q9BSH5 Z99127.1-201ENST00000452442 670 ntTSL 5 BASIC3.59□□□□□ -1.83
HDHD3Q9BSH5 NFU1-207ENST00000462320 558 ntTSL 4 BASIC3.59□□□□□ -1.83
HDHD3Q9BSH5 TSACC-207ENST00000470342 601 ntTSL 2 BASIC3.59□□□□□ -1.83
HDHD3Q9BSH5 AC083982.1-201ENST00000485679 344 ntBASIC3.59□□□□□ -1.83
HDHD3Q9BSH5 AC090543.1-201ENST00000492168 485 ntBASIC3.59□□□□□ -1.83
HDHD3Q9BSH5 AC105233.1-201ENST00000498840 781 ntBASIC3.59□□□□□ -1.83
HDHD3Q9BSH5 AC017037.1-201ENST00000508460 471 ntBASIC3.59□□□□□ -1.83
HDHD3Q9BSH5 LINC02231-201ENST00000510459 447 ntTSL 3 BASIC3.59□□□□□ -1.83
HDHD3Q9BSH5 OR52Z1-201ENST00000510471 897 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
HDHD3Q9BSH5 AC090193.1-201ENST00000518633 543 ntTSL 4 BASIC3.59□□□□□ -1.83
HDHD3Q9BSH5 AC099520.1-205ENST00000524083 316 ntTSL 3 BASIC3.59□□□□□ -1.83
HDHD3Q9BSH5 TAS2R46-201ENST00000533467 930 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
HDHD3Q9BSH5 UBTFL9-201ENST00000534504 1148 ntBASIC3.59□□□□□ -1.83
HDHD3Q9BSH5 AC073530.1-202ENST00000538008 508 ntTSL 2 BASIC3.59□□□□□ -1.83
HDHD3Q9BSH5 AC073864.1-201ENST00000540161 562 ntTSL 4 BASIC3.59□□□□□ -1.83
HDHD3Q9BSH5 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC3.59□□□□□ -1.83
HDHD3Q9BSH5 C1GALT1P1-201ENST00000548895 1089 ntBASIC3.59□□□□□ -1.83
HDHD3Q9BSH5 PCNPP1-201ENST00000552501 511 ntBASIC3.59□□□□□ -1.83
HDHD3Q9BSH5 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC3.59□□□□□ -1.83
HDHD3Q9BSH5 AC023158.1-201ENST00000561632 1025 ntBASIC3.59□□□□□ -1.83
HDHD3Q9BSH5 RN7SL690P-201ENST00000582087 240 ntBASIC3.59□□□□□ -1.83
HDHD3Q9BSH5 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC3.59□□□□□ -1.83
HDHD3Q9BSH5 AL121989.1-201ENST00000585888 746 ntTSL 3 BASIC3.59□□□□□ -1.83
HDHD3Q9BSH5 AL109935.2-201ENST00000587737 395 ntTSL 5 BASIC3.59□□□□□ -1.83
HDHD3Q9BSH5 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC3.59□□□□□ -1.83
HDHD3Q9BSH5 AL121904.1-201ENST00000611894 948 ntTSL 5 BASIC3.59□□□□□ -1.83
HDHD3Q9BSH5 ZNF630-AS1-201ENST00000614448 397 ntTSL 3 BASIC3.59□□□□□ -1.83
HDHD3Q9BSH5 AL137078.2-201ENST00000615740 318 ntTSL 5 BASIC3.59□□□□□ -1.83
HDHD3Q9BSH5 AC243829.4-201ENST00000620056 701 ntTSL 5 BASIC3.59□□□□□ -1.83
HDHD3Q9BSH5 AP002967.1-201ENST00000624203 539 ntBASIC3.59□□□□□ -1.83
HDHD3Q9BSH5 AL355306.2-208ENST00000634868 1251 ntTSL 5 BASIC3.59□□□□□ -1.83
HDHD3Q9BSH5 AL163152.1-201ENST00000642001 374 ntBASIC3.59□□□□□ -1.83
HDHD3Q9BSH5 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
HDHD3Q9BSH5 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
HDHD3Q9BSH5 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
HDHD3Q9BSH5 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
HDHD3Q9BSH5 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC3.59□□□□□ -1.84
HDHD3Q9BSH5 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
HDHD3Q9BSH5 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
HDHD3Q9BSH5 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC3.58□□□□□ -1.84
HDHD3Q9BSH5 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC3.58□□□□□ -1.84
HDHD3Q9BSH5 ST7-212ENST00000422922 1887 ntTSL 5 BASIC3.58□□□□□ -1.84
HDHD3Q9BSH5 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC3.58□□□□□ -1.84
HDHD3Q9BSH5 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC3.58□□□□□ -1.84
HDHD3Q9BSH5 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC3.58□□□□□ -1.84
HDHD3Q9BSH5 CSTA-201ENST00000264474 751 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
HDHD3Q9BSH5 UBE2V1P15-201ENST00000407776 448 ntBASIC3.58□□□□□ -1.84
HDHD3Q9BSH5 RNA5SP39-201ENST00000411245 120 ntBASIC3.58□□□□□ -1.84
HDHD3Q9BSH5 AC092652.1-202ENST00000413315 587 ntTSL 4 BASIC3.58□□□□□ -1.84
HDHD3Q9BSH5 AL645465.1-201ENST00000417765 642 ntTSL 3 BASIC3.58□□□□□ -1.84
HDHD3Q9BSH5 RPEP3-201ENST00000425462 676 ntBASIC3.58□□□□□ -1.84
HDHD3Q9BSH5 AL590723.1-201ENST00000426030 629 ntTSL 5 BASIC3.58□□□□□ -1.84
HDHD3Q9BSH5 MORF4L1P7-201ENST00000426038 703 ntBASIC3.58□□□□□ -1.84
HDHD3Q9BSH5 AC066595.1-201ENST00000426697 399 ntTSL 3 BASIC3.58□□□□□ -1.84
HDHD3Q9BSH5 FAR1P1-201ENST00000427163 934 ntBASIC3.58□□□□□ -1.84
HDHD3Q9BSH5 NANOGP6-201ENST00000429190 847 ntBASIC3.58□□□□□ -1.84
HDHD3Q9BSH5 CEACAMP1-201ENST00000434624 1035 ntBASIC3.58□□□□□ -1.84
HDHD3Q9BSH5 VN1R54P-201ENST00000435210 1049 ntBASIC3.58□□□□□ -1.84
HDHD3Q9BSH5 RPL23AP89-201ENST00000439324 255 ntBASIC3.58□□□□□ -1.84
HDHD3Q9BSH5 AL691517.1-201ENST00000440833 1235 ntBASIC3.58□□□□□ -1.84
HDHD3Q9BSH5 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC3.58□□□□□ -1.84
HDHD3Q9BSH5 AP000302.1-201ENST00000450928 666 ntTSL 2 BASIC3.58□□□□□ -1.84
HDHD3Q9BSH5 AL133244.1-201ENST00000456007 258 ntBASIC3.58□□□□□ -1.84
HDHD3Q9BSH5 AC091976.1-201ENST00000458002 448 ntTSL 3 BASIC3.58□□□□□ -1.84
HDHD3Q9BSH5 RN7SL329P-201ENST00000467740 299 ntBASIC3.58□□□□□ -1.84
HDHD3Q9BSH5 TOPORSLP1-202ENST00000469756 969 ntTSL 3 BASIC3.58□□□□□ -1.84
HDHD3Q9BSH5 AC006517.1-201ENST00000480485 328 ntBASIC3.58□□□□□ -1.84
HDHD3Q9BSH5 SUMO1P1-201ENST00000497904 306 ntBASIC3.58□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 128.8 ms