Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 CYP2C56P-201ENST00000440076 291 ntBASIC6.81□□□□□ -1.32
USB1Q9BQ65 OR1H1P-201ENST00000448731 937 ntBASIC6.81□□□□□ -1.32
USB1Q9BQ65 AL162388.1-201ENST00000450912 352 ntBASIC6.81□□□□□ -1.32
USB1Q9BQ65 GAS5-223ENST00000452197 483 ntTSL 3 BASIC6.81□□□□□ -1.32
USB1Q9BQ65 AC016724.1-201ENST00000453215 421 ntBASIC6.81□□□□□ -1.32
USB1Q9BQ65 AC007547.2-201ENST00000468802 360 ntBASIC6.81□□□□□ -1.32
USB1Q9BQ65 RN7SL338P-201ENST00000481467 293 ntBASIC6.81□□□□□ -1.32
USB1Q9BQ65 RN7SL388P-201ENST00000498736 339 ntBASIC6.81□□□□□ -1.32
USB1Q9BQ65 GZMAP1-201ENST00000503054 631 ntBASIC6.81□□□□□ -1.32
USB1Q9BQ65 RNU6-189P-201ENST00000516120 101 ntBASIC6.81□□□□□ -1.32
USB1Q9BQ65 AC131281.1-201ENST00000522984 164 ntBASIC6.81□□□□□ -1.32
USB1Q9BQ65 AP006259.1-201ENST00000528520 561 ntTSL 2 BASIC6.81□□□□□ -1.32
USB1Q9BQ65 AC006065.4-204ENST00000537478 654 ntTSL 2 BASIC6.81□□□□□ -1.32
USB1Q9BQ65 AC079313.2-202ENST00000552053 511 ntTSL 3 BASIC6.81□□□□□ -1.32
USB1Q9BQ65 AC004817.1-201ENST00000553621 721 ntTSL 4 BASIC6.81□□□□□ -1.32
USB1Q9BQ65 AC087286.2-201ENST00000558980 660 ntTSL 3 BASIC6.81□□□□□ -1.32
USB1Q9BQ65 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC6.81□□□□□ -1.32
USB1Q9BQ65 MIR4258-201ENST00000580920 91 ntBASIC6.81□□□□□ -1.32
USB1Q9BQ65 AC005154.1-225ENST00000581665 564 ntTSL 4 BASIC6.81□□□□□ -1.32
USB1Q9BQ65 AC010761.2-202ENST00000582536 391 ntTSL 5 BASIC6.81□□□□□ -1.32
USB1Q9BQ65 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC6.81□□□□□ -1.32
USB1Q9BQ65 AC078899.3-201ENST00000599065 212 ntBASIC6.81□□□□□ -1.32
USB1Q9BQ65 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC6.81□□□□□ -1.32
USB1Q9BQ65 LAPTM4BP2-201ENST00000604542 446 ntBASIC6.81□□□□□ -1.32
USB1Q9BQ65 AL021879.1-201ENST00000611756 288 ntBASIC6.81□□□□□ -1.32
USB1Q9BQ65 GLYATL1-219ENST00000612196 909 ntAPPRIS ALT2 TSL 1 (best) BASIC6.81□□□□□ -1.32
USB1Q9BQ65 DUSP12P1-201ENST00000612874 516 ntBASIC6.81□□□□□ -1.32
USB1Q9BQ65 ACACA-232ENST00000614438 569 ntTSL 2 BASIC6.81□□□□□ -1.32
USB1Q9BQ65 DLEU2_5.1-201ENST00000615567 84 ntBASIC6.81□□□□□ -1.32
USB1Q9BQ65 AL353898.2-201ENST00000623000 255 ntBASIC6.81□□□□□ -1.32
USB1Q9BQ65 AP000843.1-201ENST00000624880 701 ntBASIC6.81□□□□□ -1.32
USB1Q9BQ65 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC6.81□□□□□ -1.32
USB1Q9BQ65 MTND5P7-201ENST00000413558 1798 ntBASIC6.81□□□□□ -1.32
USB1Q9BQ65 GABRR1-206ENST00000611484 3259 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
USB1Q9BQ65 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
USB1Q9BQ65 AC087203.2-201ENST00000526502 1587 ntBASIC6.81□□□□□ -1.32
USB1Q9BQ65 UG0898H09-202ENST00000623646 7040 ntBASIC6.81□□□□□ -1.32
USB1Q9BQ65 MLLT10-202ENST00000377059 4850 ntAPPRIS ALT2 TSL 1 (best) BASIC6.81□□□□□ -1.32
USB1Q9BQ65 SORBS1-219ENST00000607232 4374 ntAPPRIS ALT2 TSL 5 BASIC6.81□□□□□ -1.32
USB1Q9BQ65 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
USB1Q9BQ65 ADAM3A-205ENST00000481351 2379 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
USB1Q9BQ65 LRBA-209ENST00000510413 10032 ntAPPRIS ALT2 TSL 1 (best) BASIC6.81□□□□□ -1.32
USB1Q9BQ65 LRAT-206ENST00000507827 2654 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
USB1Q9BQ65 VDAC3-201ENST00000022615 1355 ntAPPRIS P3 TSL 1 (best) BASIC6.81□□□□□ -1.32
USB1Q9BQ65 CYFIP2-210ENST00000522463 3477 ntTSL 2 BASIC6.81□□□□□ -1.32
USB1Q9BQ65 DDX4-202ENST00000354991 2324 ntTSL 5 BASIC6.81□□□□□ -1.32
USB1Q9BQ65 PLPPR1-202ENST00000395056 2318 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
USB1Q9BQ65 AC090220.1-201ENST00000593078 1699 ntBASIC6.81□□□□□ -1.32
USB1Q9BQ65 ZNF182-202ENST00000396965 3586 ntAPPRIS P4 TSL 2 BASIC6.8□□□□□ -1.32
USB1Q9BQ65 ZNF333-203ENST00000540689 3595 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
USB1Q9BQ65 CTH-202ENST00000370938 1805 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
USB1Q9BQ65 XRCC6P2-201ENST00000457831 1822 ntBASIC6.8□□□□□ -1.32
USB1Q9BQ65 AC007744.1-201ENST00000607540 2289 ntTSL 5 BASIC6.8□□□□□ -1.32
USB1Q9BQ65 ANKRD44-202ENST00000328737 3686 ntTSL 2 BASIC6.8□□□□□ -1.32
USB1Q9BQ65 SLC24A1-209ENST00000537259 3983 ntAPPRIS ALT2 TSL 2 BASIC6.8□□□□□ -1.32
USB1Q9BQ65 OFD1P17-201ENST00000437639 3018 ntBASIC6.8□□□□□ -1.32
USB1Q9BQ65 MID1-205ENST00000380785 6092 ntAPPRIS P1 TSL 2 BASIC6.8□□□□□ -1.32
USB1Q9BQ65 SEL1L3-201ENST00000264868 4369 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
USB1Q9BQ65 MATR3-232ENST00000502929 4373 ntTSL 2 BASIC6.8□□□□□ -1.32
USB1Q9BQ65 LRRC7-203ENST00000370958 2375 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
USB1Q9BQ65 ATF7IP-222ENST00000544627 4847 ntAPPRIS ALT2 TSL 1 (best) BASIC6.8□□□□□ -1.32
USB1Q9BQ65 DCLK1-208ENST00000615680 7592 ntTSL 2 BASIC6.8□□□□□ -1.32
USB1Q9BQ65 TTC41P-204ENST00000548897 2998 ntTSL 5 BASIC6.8□□□□□ -1.32
USB1Q9BQ65 CTAGE1-201ENST00000391403 4313 ntAPPRIS P2 BASIC6.8□□□□□ -1.32
USB1Q9BQ65 MEIS1-201ENST00000272369 4291 ntAPPRIS P2 TSL 1 (best) BASIC6.8□□□□□ -1.32
USB1Q9BQ65 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC6.8□□□□□ -1.32
USB1Q9BQ65 Y_RNA.210-201ENST00000364161 110 ntBASIC6.8□□□□□ -1.32
USB1Q9BQ65 MUSK-205ENST00000374448 2754 ntAPPRIS P1 TSL 5 BASIC6.8□□□□□ -1.32
USB1Q9BQ65 GAGE12E-201ENST00000381698 520 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
USB1Q9BQ65 SNORA70I-201ENST00000384544 135 ntBASIC6.8□□□□□ -1.32
USB1Q9BQ65 TRBV6-6-201ENST00000390371 388 ntAPPRIS P1 BASIC6.8□□□□□ -1.32
USB1Q9BQ65 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC6.8□□□□□ -1.32
USB1Q9BQ65 GEMIN2P2-201ENST00000418195 715 ntBASIC6.8□□□□□ -1.32
USB1Q9BQ65 AC073283.2-202ENST00000426892 591 ntTSL 4 BASIC6.8□□□□□ -1.32
USB1Q9BQ65 OR10G8-201ENST00000431524 1045 ntAPPRIS P1 BASIC6.8□□□□□ -1.32
USB1Q9BQ65 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC6.8□□□□□ -1.32
USB1Q9BQ65 LINC01805-201ENST00000436433 572 ntTSL 5 BASIC6.8□□□□□ -1.32
USB1Q9BQ65 AC097527.1-201ENST00000437031 530 ntBASIC6.8□□□□□ -1.32
USB1Q9BQ65 AC092013.1-201ENST00000438795 332 ntBASIC6.8□□□□□ -1.32
USB1Q9BQ65 AL353754.1-201ENST00000440219 340 ntBASIC6.8□□□□□ -1.32
USB1Q9BQ65 AL392103.1-201ENST00000447000 198 ntBASIC6.8□□□□□ -1.32
USB1Q9BQ65 AC007000.1-201ENST00000453064 794 ntBASIC6.8□□□□□ -1.32
USB1Q9BQ65 CBX1P2-201ENST00000453841 458 ntBASIC6.8□□□□□ -1.32
USB1Q9BQ65 TRBV26-201ENST00000456572 344 ntBASIC6.8□□□□□ -1.32
USB1Q9BQ65 RPL7P17-201ENST00000470927 724 ntBASIC6.8□□□□□ -1.32
USB1Q9BQ65 RN7SL549P-201ENST00000478997 282 ntBASIC6.8□□□□□ -1.32
USB1Q9BQ65 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
USB1Q9BQ65 RPS27AP18-201ENST00000515536 459 ntBASIC6.8□□□□□ -1.32
USB1Q9BQ65 RNU6-475P-201ENST00000516073 104 ntBASIC6.8□□□□□ -1.32
USB1Q9BQ65 Y_RNA.670-201ENST00000516255 105 ntBASIC6.8□□□□□ -1.32
USB1Q9BQ65 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC6.8□□□□□ -1.32
USB1Q9BQ65 AC020891.2-201ENST00000559672 776 ntTSL 2 BASIC6.8□□□□□ -1.32
USB1Q9BQ65 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
USB1Q9BQ65 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC6.8□□□□□ -1.32
USB1Q9BQ65 NUDT7-206ENST00000568787 678 ntTSL 2 BASIC6.8□□□□□ -1.32
USB1Q9BQ65 AC090415.1-201ENST00000581877 847 ntBASIC6.8□□□□□ -1.32
USB1Q9BQ65 MIR3128-201ENST00000581957 66 ntBASIC6.8□□□□□ -1.32
USB1Q9BQ65 AC135178.2-201ENST00000582471 3087 ntAPPRIS P1 TSL 5 BASIC6.8□□□□□ -1.32
USB1Q9BQ65 AC005884.1-201ENST00000588604 429 ntTSL 5 BASIC6.8□□□□□ -1.32
USB1Q9BQ65 AC104695.2-201ENST00000605056 775 ntBASIC6.8□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 72.7 ms