Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
CSMD1Q96PZ7 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
CSMD1Q96PZ7 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC3.34□□□□□ -1.87
CSMD1Q96PZ7 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
CSMD1Q96PZ7 FLG-201ENST00000368799 12747 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
CSMD1Q96PZ7 SNORA80A-201ENST00000363922 136 ntBASIC3.34□□□□□ -1.87
CSMD1Q96PZ7 CDKL4-202ENST00000395035 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC3.34□□□□□ -1.87
CSMD1Q96PZ7 AC073063.1-201ENST00000434352 607 ntBASIC3.34□□□□□ -1.87
CSMD1Q96PZ7 AL445433.1-201ENST00000457507 257 ntBASIC3.34□□□□□ -1.87
CSMD1Q96PZ7 RNA5SP249-201ENST00000516127 99 ntBASIC3.34□□□□□ -1.87
CSMD1Q96PZ7 PCAT1-201ENST00000519319 734 ntTSL 2 BASIC3.34□□□□□ -1.87
CSMD1Q96PZ7 MFAP5-212ENST00000543369 972 ntTSL 3 BASIC3.34□□□□□ -1.87
CSMD1Q96PZ7 AC127024.5-201ENST00000580085 462 ntBASIC3.34□□□□□ -1.87
CSMD1Q96PZ7 AC115522.1-201ENST00000595680 556 ntTSL 4 BASIC3.34□□□□□ -1.87
CSMD1Q96PZ7 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC3.34□□□□□ -1.87
CSMD1Q96PZ7 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC3.34□□□□□ -1.87
CSMD1Q96PZ7 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
CSMD1Q96PZ7 DNM1P47-202ENST00000561463 15043 ntTSL 5 BASIC3.34□□□□□ -1.87
CSMD1Q96PZ7 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC3.34□□□□□ -1.87
CSMD1Q96PZ7 ZC3H14-201ENST00000251038 18281 ntAPPRIS P3 TSL 1 (best) BASIC3.34□□□□□ -1.87
CSMD1Q96PZ7 DMD-228ENST00000541735 7080 ntTSL 5 BASIC3.34□□□□□ -1.87
CSMD1Q96PZ7 FAM26D-202ENST00000368597 1311 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
CSMD1Q96PZ7 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC3.34□□□□□ -1.87
CSMD1Q96PZ7 RNA5SP374-201ENST00000362939 125 ntBASIC3.34□□□□□ -1.88
CSMD1Q96PZ7 ESD-201ENST00000378697 1079 ntTSL 5 BASIC3.34□□□□□ -1.88
CSMD1Q96PZ7 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC3.34□□□□□ -1.88
CSMD1Q96PZ7 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC3.34□□□□□ -1.88
CSMD1Q96PZ7 KRT19P6-201ENST00000510983 209 ntBASIC3.34□□□□□ -1.88
CSMD1Q96PZ7 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC3.34□□□□□ -1.88
CSMD1Q96PZ7 MIR5680-201ENST00000577577 84 ntBASIC3.34□□□□□ -1.88
CSMD1Q96PZ7 AC091178.1-203ENST00000584586 279 ntBASIC3.34□□□□□ -1.88
CSMD1Q96PZ7 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC3.34□□□□□ -1.88
CSMD1Q96PZ7 PCA3_2.1-201ENST00000612507 409 ntBASIC3.34□□□□□ -1.88
CSMD1Q96PZ7 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC3.34□□□□□ -1.88
CSMD1Q96PZ7 THRB-203ENST00000396671 7506 ntAPPRIS P2 TSL 5 BASIC3.34□□□□□ -1.88
CSMD1Q96PZ7 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC3.34□□□□□ -1.88
CSMD1Q96PZ7 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC3.34□□□□□ -1.88
CSMD1Q96PZ7 EPS8-207ENST00000540613 2204 ntTSL 2 BASIC3.34□□□□□ -1.88
CSMD1Q96PZ7 APOL6-201ENST00000409652 10121 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
CSMD1Q96PZ7 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC3.34□□□□□ -1.88
CSMD1Q96PZ7 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.88
CSMD1Q96PZ7 TSC1-203ENST00000440111 8463 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
CSMD1Q96PZ7 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC3.34□□□□□ -1.88
CSMD1Q96PZ7 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC3.34□□□□□ -1.88
CSMD1Q96PZ7 BTLA-201ENST00000334529 3213 ntAPPRIS P3 TSL 1 (best) BASIC3.33□□□□□ -1.88
CSMD1Q96PZ7 AC062016.2-201ENST00000420950 676 ntBASIC3.33□□□□□ -1.88
CSMD1Q96PZ7 AC018635.1-201ENST00000468292 1030 ntBASIC3.33□□□□□ -1.88
CSMD1Q96PZ7 RANP9-201ENST00000519957 271 ntBASIC3.33□□□□□ -1.88
CSMD1Q96PZ7 AC105999.2-201ENST00000521363 881 ntTSL 2 BASIC3.33□□□□□ -1.88
CSMD1Q96PZ7 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC3.33□□□□□ -1.88
CSMD1Q96PZ7 KIAA0586-201ENST00000261244 4807 ntAPPRIS P3 TSL 1 (best) BASIC3.33□□□□□ -1.88
CSMD1Q96PZ7 ZNF493-202ENST00000355504 4386 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
CSMD1Q96PZ7 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC3.33□□□□□ -1.88
CSMD1Q96PZ7 AL592182.3-201ENST00000642132 3304 ntBASIC3.33□□□□□ -1.88
CSMD1Q96PZ7 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC3.33□□□□□ -1.88
CSMD1Q96PZ7 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
CSMD1Q96PZ7 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC3.33□□□□□ -1.88
CSMD1Q96PZ7 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.33□□□□□ -1.88
CSMD1Q96PZ7 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC3.33□□□□□ -1.88
CSMD1Q96PZ7 ARHGAP42P3-201ENST00000443989 2508 ntBASIC3.33□□□□□ -1.88
CSMD1Q96PZ7 MIR133A2-201ENST00000347538 102 ntBASIC3.33□□□□□ -1.88
CSMD1Q96PZ7 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC3.33□□□□□ -1.88
CSMD1Q96PZ7 FCF1P7-201ENST00000451185 558 ntBASIC3.33□□□□□ -1.88
CSMD1Q96PZ7 TMED11P-201ENST00000479478 690 ntBASIC3.33□□□□□ -1.88
CSMD1Q96PZ7 AC090286.3-201ENST00000573133 187 ntBASIC3.33□□□□□ -1.88
CSMD1Q96PZ7 AC090246.1-201ENST00000616499 426 ntBASIC3.33□□□□□ -1.88
CSMD1Q96PZ7 AL031658.2-201ENST00000616850 651 ntBASIC3.33□□□□□ -1.88
CSMD1Q96PZ7 CDY11P-201ENST00000447168 1651 ntBASIC3.33□□□□□ -1.88
CSMD1Q96PZ7 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC3.33□□□□□ -1.88
CSMD1Q96PZ7 GCSAML-210ENST00000536561 4063 ntAPPRIS P3 TSL 4 BASIC3.33□□□□□ -1.88
CSMD1Q96PZ7 ABCA1-202ENST00000374736 10494 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
CSMD1Q96PZ7 KMT2C-201ENST00000262189 16862 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
CSMD1Q96PZ7 FER1L6-201ENST00000522917 6051 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
CSMD1Q96PZ7 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC3.33□□□□□ -1.88
CSMD1Q96PZ7 BDP1P-201ENST00000582658 1990 ntBASIC3.33□□□□□ -1.88
CSMD1Q96PZ7 ALMS1-206ENST00000613296 12925 ntAPPRIS P2 TSL 1 (best) BASIC3.33□□□□□ -1.88
CSMD1Q96PZ7 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
CSMD1Q96PZ7 AP001992.1-205ENST00000462248 379 ntBASIC3.33□□□□□ -1.88
CSMD1Q96PZ7 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
CSMD1Q96PZ7 XPNPEP3-201ENST00000357137 7988 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
CSMD1Q96PZ7 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
CSMD1Q96PZ7 GREM1-203ENST00000622074 14606 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
CSMD1Q96PZ7 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
CSMD1Q96PZ7 EEF1A1P42-201ENST00000613436 1331 ntBASIC3.33□□□□□ -1.88
CSMD1Q96PZ7 AL360014.1-201ENST00000562922 2084 ntTSL 3 BASIC3.32□□□□□ -1.88
CSMD1Q96PZ7 ARF4P3-201ENST00000397387 509 ntBASIC3.32□□□□□ -1.88
CSMD1Q96PZ7 AL590999.1-205ENST00000420293 440 ntTSL 3 BASIC3.32□□□□□ -1.88
CSMD1Q96PZ7 AC008065.1-201ENST00000428525 348 ntBASIC3.32□□□□□ -1.88
CSMD1Q96PZ7 AL590999.1-204ENST00000430595 638 ntTSL 3 BASIC3.32□□□□□ -1.88
CSMD1Q96PZ7 AC087650.1-201ENST00000431445 468 ntBASIC3.32□□□□□ -1.88
CSMD1Q96PZ7 AC090013.1-201ENST00000485147 480 ntBASIC3.32□□□□□ -1.88
CSMD1Q96PZ7 AC105460.2-202ENST00000502936 825 ntTSL 2 BASIC3.32□□□□□ -1.88
CSMD1Q96PZ7 BNIP3P41-201ENST00000503774 571 ntBASIC3.32□□□□□ -1.88
CSMD1Q96PZ7 THAP6-209ENST00000507556 1134 ntTSL 2 BASIC3.32□□□□□ -1.88
CSMD1Q96PZ7 AC034105.3-201ENST00000565294 442 ntBASIC3.32□□□□□ -1.88
CSMD1Q96PZ7 OR7C1-205ENST00000642030 11778 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
CSMD1Q96PZ7 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC3.32□□□□□ -1.88
CSMD1Q96PZ7 MDM4-217ENST00000621032 5592 ntTSL 2 BASIC3.32□□□□□ -1.88
CSMD1Q96PZ7 ZNF283-201ENST00000324461 2297 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
CSMD1Q96PZ7 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 103.1 ms