Protein–RNA interactions for Protein: Q96NR3

PTCHD1, Patched domain-containing protein 1, humanhuman

Predictions only

Length 888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD1Q96NR3 AC119744.1-201ENST00000454746 1715 ntBASIC5.71□□□□□ -1.49
PTCHD1Q96NR3 AC008627.1-201ENST00000517511 1704 ntBASIC5.71□□□□□ -1.49
PTCHD1Q96NR3 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC5.71□□□□□ -1.49
PTCHD1Q96NR3 RASSF8-213ENST00000542865 2219 ntAPPRIS P1 TSL 2 BASIC5.71□□□□□ -1.49
PTCHD1Q96NR3 ASAH1-232ENST00000636691 2472 ntTSL 5 BASIC5.71□□□□□ -1.49
PTCHD1Q96NR3 BX664718.1-201ENST00000439824 3224 ntTSL 2 BASIC5.71□□□□□ -1.49
PTCHD1Q96NR3 SGIP1-201ENST00000237247 3997 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.49
PTCHD1Q96NR3 GHR-211ENST00000618088 4491 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.49
PTCHD1Q96NR3 LINC01722-201ENST00000456265 3033 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
PTCHD1Q96NR3 KIF27-202ENST00000334204 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
PTCHD1Q96NR3 SGO1-202ENST00000306698 1531 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
PTCHD1Q96NR3 CLEC7A-202ENST00000304084 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC5.71□□□□□ -1.5
PTCHD1Q96NR3 Y_RNA.813-201ENST00000364639 102 ntBASIC5.71□□□□□ -1.5
PTCHD1Q96NR3 Y_RNA.296-201ENST00000364930 108 ntBASIC5.71□□□□□ -1.5
PTCHD1Q96NR3 ARGLU1-202ENST00000375926 821 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
PTCHD1Q96NR3 RNU6-729P-201ENST00000384399 107 ntBASIC5.71□□□□□ -1.5
PTCHD1Q96NR3 AL138733.1-201ENST00000415477 853 ntTSL 5 BASIC5.71□□□□□ -1.5
PTCHD1Q96NR3 AC068286.1-201ENST00000416173 467 ntTSL 4 BASIC5.71□□□□□ -1.5
PTCHD1Q96NR3 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC5.71□□□□□ -1.5
PTCHD1Q96NR3 RPS15AP30-201ENST00000420976 390 ntBASIC5.71□□□□□ -1.5
PTCHD1Q96NR3 AC012498.1-201ENST00000424037 437 ntBASIC5.71□□□□□ -1.5
PTCHD1Q96NR3 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC5.71□□□□□ -1.5
PTCHD1Q96NR3 CASP12-204ENST00000433738 709 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
PTCHD1Q96NR3 MTND4LP16-201ENST00000440828 295 ntBASIC5.71□□□□□ -1.5
PTCHD1Q96NR3 PCNPP2-201ENST00000441651 455 ntBASIC5.71□□□□□ -1.5
PTCHD1Q96NR3 AC004865.1-201ENST00000442276 1003 ntBASIC5.71□□□□□ -1.5
PTCHD1Q96NR3 HCG14-201ENST00000444986 413 ntTSL 2 BASIC5.71□□□□□ -1.5
PTCHD1Q96NR3 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC5.71□□□□□ -1.5
PTCHD1Q96NR3 RPL23AP60-201ENST00000450011 454 ntBASIC5.71□□□□□ -1.5
PTCHD1Q96NR3 RPL23AP71-201ENST00000470966 469 ntBASIC5.71□□□□□ -1.5
PTCHD1Q96NR3 AL355032.1-201ENST00000472981 438 ntBASIC5.71□□□□□ -1.5
PTCHD1Q96NR3 AC083795.1-201ENST00000491760 320 ntBASIC5.71□□□□□ -1.5
PTCHD1Q96NR3 AC069439.1-201ENST00000494739 167 ntBASIC5.71□□□□□ -1.5
PTCHD1Q96NR3 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC5.71□□□□□ -1.5
PTCHD1Q96NR3 LSM3P4-201ENST00000502948 309 ntBASIC5.71□□□□□ -1.5
PTCHD1Q96NR3 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC5.71□□□□□ -1.5
PTCHD1Q96NR3 MOCS2-206ENST00000510818 1251 ntTSL 5 BASIC5.71□□□□□ -1.5
PTCHD1Q96NR3 AC046134.1-201ENST00000514454 666 ntBASIC5.71□□□□□ -1.5
PTCHD1Q96NR3 MTND5P4-201ENST00000514978 288 ntBASIC5.71□□□□□ -1.5
PTCHD1Q96NR3 SNORA20.3-201ENST00000516880 132 ntBASIC5.71□□□□□ -1.5
PTCHD1Q96NR3 MTCO2P4-201ENST00000517968 247 ntBASIC5.71□□□□□ -1.5
PTCHD1Q96NR3 IGHVII-60-1-201ENST00000519079 256 ntBASIC5.71□□□□□ -1.5
PTCHD1Q96NR3 CASC19-203ENST00000523510 575 ntTSL 3 BASIC5.71□□□□□ -1.5
PTCHD1Q96NR3 AP003396.4-201ENST00000527574 265 ntBASIC5.71□□□□□ -1.5
PTCHD1Q96NR3 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC5.71□□□□□ -1.5
PTCHD1Q96NR3 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC5.71□□□□□ -1.5
PTCHD1Q96NR3 MORF4L1-205ENST00000558502 855 ntTSL 3 BASIC5.71□□□□□ -1.5
PTCHD1Q96NR3 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC5.71□□□□□ -1.5
PTCHD1Q96NR3 AL133410.1-201ENST00000574939 546 ntTSL 3 BASIC5.71□□□□□ -1.5
PTCHD1Q96NR3 MOCS2-210ENST00000584946 736 ntTSL 5 BASIC5.71□□□□□ -1.5
PTCHD1Q96NR3 LINC01198-204ENST00000594153 552 ntTSL 3 BASIC5.71□□□□□ -1.5
PTCHD1Q96NR3 AC243967.1-201ENST00000598976 578 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
PTCHD1Q96NR3 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC5.71□□□□□ -1.5
PTCHD1Q96NR3 AC009994.1-201ENST00000606889 253 ntBASIC5.71□□□□□ -1.5
PTCHD1Q96NR3 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC5.71□□□□□ -1.5
PTCHD1Q96NR3 AC103710.4-201ENST00000609301 899 ntBASIC5.71□□□□□ -1.5
PTCHD1Q96NR3 AP001506.1-201ENST00000615444 211 ntBASIC5.71□□□□□ -1.5
PTCHD1Q96NR3 AC096861.1-201ENST00000616652 240 ntBASIC5.71□□□□□ -1.5
PTCHD1Q96NR3 AC104260.1-201ENST00000616660 539 ntBASIC5.71□□□□□ -1.5
PTCHD1Q96NR3 AC002553.4-201ENST00000616896 331 ntBASIC5.71□□□□□ -1.5
PTCHD1Q96NR3 AC245014.3-201ENST00000618589 347 ntBASIC5.71□□□□□ -1.5
PTCHD1Q96NR3 AP005264.7-201ENST00000625003 745 ntBASIC5.71□□□□□ -1.5
PTCHD1Q96NR3 LINC01206-233ENST00000630063 878 ntTSL 5 BASIC5.71□□□□□ -1.5
PTCHD1Q96NR3 UGT2B4-207ENST00000639621 1154 ntTSL 5 BASIC5.71□□□□□ -1.5
PTCHD1Q96NR3 AP2B1-211ENST00000610402 3204 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
PTCHD1Q96NR3 SLC30A7-203ENST00000370112 7898 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
PTCHD1Q96NR3 RBM44-206ENST00000611254 1427 ntTSL 2 BASIC5.71□□□□□ -1.5
PTCHD1Q96NR3 CACNB4-234ENST00000636785 3787 ntTSL 5 BASIC5.71□□□□□ -1.5
PTCHD1Q96NR3 EOGT-208ENST00000540764 1584 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
PTCHD1Q96NR3 AC005725.1-201ENST00000577346 2607 ntBASIC5.71□□□□□ -1.5
PTCHD1Q96NR3 FCGR1B-209ENST00000616817 1584 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.5
PTCHD1Q96NR3 LINC01527-201ENST00000419578 1997 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
PTCHD1Q96NR3 CASC19-284ENST00000642142 1868 ntBASIC5.71□□□□□ -1.5
PTCHD1Q96NR3 AL137141.1-201ENST00000624622 4836 ntBASIC5.71□□□□□ -1.5
PTCHD1Q96NR3 PSG1-206ENST00000595356 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
PTCHD1Q96NR3 SLFN12-201ENST00000304905 2383 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
PTCHD1Q96NR3 RRM1-201ENST00000300738 3076 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
PTCHD1Q96NR3 HEATR1-203ENST00000366582 8447 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
PTCHD1Q96NR3 PHTF2-207ENST00000424760 1977 ntTSL 2 BASIC5.7□□□□□ -1.5
PTCHD1Q96NR3 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
PTCHD1Q96NR3 FAS-203ENST00000355279 983 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
PTCHD1Q96NR3 Y_RNA.61-201ENST00000362835 102 ntBASIC5.7□□□□□ -1.5
PTCHD1Q96NR3 SAR1A-201ENST00000373236 437 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
PTCHD1Q96NR3 RN7SKP285-201ENST00000410137 318 ntBASIC5.7□□□□□ -1.5
PTCHD1Q96NR3 RNU6-272P-201ENST00000411028 104 ntBASIC5.7□□□□□ -1.5
PTCHD1Q96NR3 AL139128.1-201ENST00000413921 941 ntBASIC5.7□□□□□ -1.5
PTCHD1Q96NR3 OR51A5P-201ENST00000415429 942 ntBASIC5.7□□□□□ -1.5
PTCHD1Q96NR3 AC078960.1-201ENST00000422160 177 ntTSL 5 BASIC5.7□□□□□ -1.5
PTCHD1Q96NR3 AC073614.1-201ENST00000438690 650 ntBASIC5.7□□□□□ -1.5
PTCHD1Q96NR3 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC5.7□□□□□ -1.5
PTCHD1Q96NR3 AC092168.1-201ENST00000443030 236 ntTSL 5 BASIC5.7□□□□□ -1.5
PTCHD1Q96NR3 REG1CP-206ENST00000447469 496 ntBASIC5.7□□□□□ -1.5
PTCHD1Q96NR3 LINC01952-202ENST00000450016 281 ntTSL 3 BASIC5.7□□□□□ -1.5
PTCHD1Q96NR3 AC016027.4-201ENST00000450866 277 ntBASIC5.7□□□□□ -1.5
PTCHD1Q96NR3 AP000472.1-201ENST00000452500 530 ntTSL 2 BASIC5.7□□□□□ -1.5
PTCHD1Q96NR3 AC092001.1-201ENST00000453012 261 ntBASIC5.7□□□□□ -1.5
PTCHD1Q96NR3 AMD1P1-201ENST00000457220 922 ntBASIC5.7□□□□□ -1.5
PTCHD1Q96NR3 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC5.7□□□□□ -1.5
PTCHD1Q96NR3 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC5.7□□□□□ -1.5
PTCHD1Q96NR3 CR383656.1-201ENST00000484916 377 ntBASIC5.7□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 173.6 ms