Protein–RNA interactions for Protein: Q96K76

USP47, Ubiquitin carboxyl-terminal hydrolase 47, humanhuman

Predictions only

Length 1,375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP47Q96K76 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC5.71□□□□□ -1.5
USP47Q96K76 LINC02307-201ENST00000553827 257 ntTSL 3 BASIC5.71□□□□□ -1.5
USP47Q96K76 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC5.71□□□□□ -1.5
USP47Q96K76 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC5.71□□□□□ -1.5
USP47Q96K76 MIR6075-201ENST00000620782 95 ntBASIC5.71□□□□□ -1.5
USP47Q96K76 CDRT1-208ENST00000630868 794 ntBASIC5.71□□□□□ -1.5
USP47Q96K76 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
USP47Q96K76 CASC19-261ENST00000641853 1638 ntBASIC5.71□□□□□ -1.5
USP47Q96K76 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
USP47Q96K76 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC5.71□□□□□ -1.5
USP47Q96K76 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
USP47Q96K76 OR51C1P-202ENST00000641159 1444 ntBASIC5.71□□□□□ -1.5
USP47Q96K76 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
USP47Q96K76 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
USP47Q96K76 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
USP47Q96K76 SNORA60-201ENST00000362396 134 ntBASIC5.7□□□□□ -1.5
USP47Q96K76 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC5.7□□□□□ -1.5
USP47Q96K76 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC5.7□□□□□ -1.5
USP47Q96K76 LINC02050-201ENST00000473938 712 ntTSL 3 BASIC5.7□□□□□ -1.5
USP47Q96K76 VN1R105P-201ENST00000486595 910 ntBASIC5.7□□□□□ -1.5
USP47Q96K76 AC026782.2-201ENST00000510845 636 ntBASIC5.7□□□□□ -1.5
USP47Q96K76 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC5.7□□□□□ -1.5
USP47Q96K76 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC5.7□□□□□ -1.5
USP47Q96K76 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC5.7□□□□□ -1.5
USP47Q96K76 RN7SL703P-201ENST00000578485 302 ntBASIC5.7□□□□□ -1.5
USP47Q96K76 AC110743.1-201ENST00000584870 478 ntBASIC5.7□□□□□ -1.5
USP47Q96K76 AC090246.1-201ENST00000616499 426 ntBASIC5.7□□□□□ -1.5
USP47Q96K76 MIR6875-201ENST00000617506 72 ntBASIC5.7□□□□□ -1.5
USP47Q96K76 LRRC39-202ENST00000370137 1396 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
USP47Q96K76 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC5.7□□□□□ -1.5
USP47Q96K76 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC5.7□□□□□ -1.5
USP47Q96K76 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
USP47Q96K76 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
USP47Q96K76 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC5.69□□□□□ -1.5
USP47Q96K76 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
USP47Q96K76 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC5.69□□□□□ -1.5
USP47Q96K76 UQCR10-201ENST00000330029 916 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
USP47Q96K76 CLEC7A-206ENST00000396484 1000 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
USP47Q96K76 RN7SKP159-201ENST00000410657 292 ntBASIC5.69□□□□□ -1.5
USP47Q96K76 RNU4-6P-201ENST00000410804 122 ntBASIC5.69□□□□□ -1.5
USP47Q96K76 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC5.69□□□□□ -1.5
USP47Q96K76 AL691449.1-201ENST00000426570 421 ntBASIC5.69□□□□□ -1.5
USP47Q96K76 HSPE1P16-201ENST00000426640 348 ntBASIC5.69□□□□□ -1.5
USP47Q96K76 LINC01878-202ENST00000453965 405 ntTSL 3 BASIC5.69□□□□□ -1.5
USP47Q96K76 TPT1P3-201ENST00000492841 512 ntBASIC5.69□□□□□ -1.5
USP47Q96K76 NPM1P21-201ENST00000513394 762 ntBASIC5.69□□□□□ -1.5
USP47Q96K76 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
USP47Q96K76 AC069240.1-201ENST00000548774 375 ntBASIC5.69□□□□□ -1.5
USP47Q96K76 AC022968.1-201ENST00000567372 442 ntBASIC5.69□□□□□ -1.5
USP47Q96K76 AL451044.1-201ENST00000604867 238 ntBASIC5.69□□□□□ -1.5
USP47Q96K76 AC095038.2-201ENST00000621464 1070 ntBASIC5.69□□□□□ -1.5
USP47Q96K76 MYOCOS-203ENST00000637303 564 ntAPPRIS P5 TSL 5 BASIC5.69□□□□□ -1.5
USP47Q96K76 AC004852.2-204ENST00000614137 1370 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
USP47Q96K76 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
USP47Q96K76 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC5.69□□□□□ -1.5
USP47Q96K76 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
USP47Q96K76 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC5.69□□□□□ -1.5
USP47Q96K76 GTDC1-203ENST00000392867 2408 ntTSL 5 BASIC5.69□□□□□ -1.5
USP47Q96K76 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
USP47Q96K76 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC5.69□□□□□ -1.5
USP47Q96K76 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
USP47Q96K76 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC5.69□□□□□ -1.5
USP47Q96K76 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC5.69□□□□□ -1.5
USP47Q96K76 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC5.69□□□□□ -1.5
USP47Q96K76 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
USP47Q96K76 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
USP47Q96K76 RNA5SP52-201ENST00000362448 134 ntBASIC5.68□□□□□ -1.5
USP47Q96K76 TRAV35-201ENST00000390462 330 ntBASIC5.68□□□□□ -1.5
USP47Q96K76 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC5.68□□□□□ -1.5
USP47Q96K76 PTMAP3-201ENST00000447474 330 ntBASIC5.68□□□□□ -1.5
USP47Q96K76 TMSB4X-204ENST00000451311 628 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
USP47Q96K76 AC146944.2-203ENST00000502493 354 ntBASIC5.68□□□□□ -1.5
USP47Q96K76 ADGRL3-AS1-203ENST00000506704 606 ntTSL 5 BASIC5.68□□□□□ -1.5
USP47Q96K76 SPINK13-202ENST00000511106 661 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
USP47Q96K76 AC139495.1-202ENST00000513164 354 ntBASIC5.68□□□□□ -1.5
USP47Q96K76 AC100801.1-201ENST00000517368 517 ntTSL 3 BASIC5.68□□□□□ -1.5
USP47Q96K76 YPEL5P3-201ENST00000547227 352 ntBASIC5.68□□□□□ -1.5
USP47Q96K76 AC233702.9-201ENST00000581528 203 ntBASIC5.68□□□□□ -1.5
USP47Q96K76 AC053481.4-201ENST00000583164 216 ntBASIC5.68□□□□□ -1.5
USP47Q96K76 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC5.68□□□□□ -1.5
USP47Q96K76 AC068020.1-201ENST00000594215 661 ntBASIC5.68□□□□□ -1.5
USP47Q96K76 AC024220.1-201ENST00000603675 484 ntBASIC5.68□□□□□ -1.5
USP47Q96K76 AC018690.1-201ENST00000608144 626 ntBASIC5.68□□□□□ -1.5
USP47Q96K76 AC245452.5-201ENST00000620649 780 ntTSL 3 BASIC5.68□□□□□ -1.5
USP47Q96K76 CABS1-201ENST00000273936 1532 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
USP47Q96K76 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC5.68□□□□□ -1.5
USP47Q96K76 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC5.68□□□□□ -1.5
USP47Q96K76 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC5.68□□□□□ -1.5
USP47Q96K76 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC5.67□□□□□ -1.5
USP47Q96K76 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
USP47Q96K76 SNORD35B-201ENST00000363660 87 ntBASIC5.67□□□□□ -1.5
USP47Q96K76 RNA5SP399-201ENST00000364003 117 ntBASIC5.67□□□□□ -1.5
USP47Q96K76 PTMAP2-201ENST00000397627 327 ntBASIC5.67□□□□□ -1.5
USP47Q96K76 HMGB3P19-201ENST00000403971 560 ntBASIC5.67□□□□□ -1.5
USP47Q96K76 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC5.67□□□□□ -1.5
USP47Q96K76 HMGB3P5-201ENST00000428894 612 ntBASIC5.67□□□□□ -1.5
USP47Q96K76 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC5.67□□□□□ -1.5
USP47Q96K76 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC5.67□□□□□ -1.5
USP47Q96K76 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC5.67□□□□□ -1.5
USP47Q96K76 AC104126.1-201ENST00000504004 711 ntTSL 3 BASIC5.67□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 125.3 ms