Protein–RNA interactions for Protein: Q95604

HLA-C, HLA class I histocompatibility antigen, Cw-17 alpha chain, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-CQ95604 GOSR2-238ENST00000640495 3395 ntTSL 5 BASIC7.2□□□□□ -1.26
HLA-CQ95604 CTNND1-216ENST00000527467 5071 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
HLA-CQ95604 CTNND1-229ENST00000531014 5053 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
HLA-CQ95604 SNORA63.7-201ENST00000365579 123 ntBASIC7.2□□□□□ -1.26
HLA-CQ95604 S100A7L2-201ENST00000368725 339 ntAPPRIS P1 TSL 5 BASIC7.2□□□□□ -1.26
HLA-CQ95604 RPS4XP9-201ENST00000405151 780 ntBASIC7.2□□□□□ -1.26
HLA-CQ95604 RNU2-29P-201ENST00000410423 189 ntBASIC7.2□□□□□ -1.26
HLA-CQ95604 RNA5SP345-201ENST00000410646 108 ntBASIC7.2□□□□□ -1.26
HLA-CQ95604 HMGB3P2-201ENST00000411913 584 ntBASIC7.2□□□□□ -1.26
HLA-CQ95604 Z93019.1-201ENST00000416450 973 ntBASIC7.2□□□□□ -1.26
HLA-CQ95604 AL358394.1-201ENST00000422807 535 ntTSL 2 BASIC7.2□□□□□ -1.26
HLA-CQ95604 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC7.2□□□□□ -1.26
HLA-CQ95604 AL031663.1-201ENST00000437445 219 ntBASIC7.2□□□□□ -1.26
HLA-CQ95604 AL139275.1-201ENST00000447315 824 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
HLA-CQ95604 MGAT2P1-201ENST00000449718 797 ntBASIC7.2□□□□□ -1.26
HLA-CQ95604 MTATP8P1-201ENST00000467115 207 ntBASIC7.2□□□□□ -1.26
HLA-CQ95604 AC006539.1-201ENST00000481419 501 ntBASIC7.2□□□□□ -1.26
HLA-CQ95604 TRBVA-201ENST00000498804 316 ntBASIC7.2□□□□□ -1.26
HLA-CQ95604 AC004062.1-201ENST00000509926 645 ntBASIC7.2□□□□□ -1.26
HLA-CQ95604 AC092903.2-201ENST00000510244 427 ntTSL 5 BASIC7.2□□□□□ -1.26
HLA-CQ95604 RGS4-209ENST00000531057 544 ntTSL 4 BASIC7.2□□□□□ -1.26
HLA-CQ95604 AP000857.1-201ENST00000532151 543 ntBASIC7.2□□□□□ -1.26
HLA-CQ95604 LINC00944-204ENST00000544499 366 ntTSL 5 BASIC7.2□□□□□ -1.26
HLA-CQ95604 AC010653.1-201ENST00000571108 881 ntBASIC7.2□□□□□ -1.26
HLA-CQ95604 MIR4424-201ENST00000585257 86 ntBASIC7.2□□□□□ -1.26
HLA-CQ95604 AC090621.1-201ENST00000592121 419 ntTSL 3 BASIC7.2□□□□□ -1.26
HLA-CQ95604 MIR6768-201ENST00000610734 72 ntBASIC7.2□□□□□ -1.26
HLA-CQ95604 MIAT_exon5_1.1-201ENST00000618919 149 ntBASIC7.2□□□□□ -1.26
HLA-CQ95604 uc_338.11-201ENST00000619132 160 ntBASIC7.2□□□□□ -1.26
HLA-CQ95604 ST6GALNAC3-203ENST00000621530 617 ntTSL 5 BASIC7.2□□□□□ -1.26
HLA-CQ95604 AL354702.2-202ENST00000641481 890 ntBASIC7.2□□□□□ -1.26
HLA-CQ95604 OR4F17-203ENST00000618231 2586 ntAPPRIS P1 BASIC7.2□□□□□ -1.26
HLA-CQ95604 ZNF512-201ENST00000355467 3541 ntAPPRIS P2 TSL 2 BASIC7.2□□□□□ -1.26
HLA-CQ95604 ZNF845-202ENST00000595091 4413 ntAPPRIS P1 TSL 4 BASIC7.2□□□□□ -1.26
HLA-CQ95604 AC016831.1-201ENST00000432045 6411 ntTSL 2 BASIC7.2□□□□□ -1.26
HLA-CQ95604 FAM161A-202ENST00000404929 3762 ntAPPRIS ALT2 TSL 1 (best) BASIC7.2□□□□□ -1.26
HLA-CQ95604 HSD17B4-220ENST00000513628 2225 ntTSL 2 BASIC7.2□□□□□ -1.26
HLA-CQ95604 PHYHIPL-202ENST00000373880 3578 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
HLA-CQ95604 NEDD1-201ENST00000266742 4046 ntAPPRIS P1 TSL 2 BASIC7.2□□□□□ -1.26
HLA-CQ95604 NUDT4-206ENST00000549992 3607 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
HLA-CQ95604 LPAR1-202ENST00000374430 2993 ntAPPRIS P2 TSL 1 (best) BASIC7.2□□□□□ -1.26
HLA-CQ95604 NR3C2-207ENST00000511528 2967 ntTSL 5 BASIC7.2□□□□□ -1.26
HLA-CQ95604 TTC41P-204ENST00000548897 2998 ntTSL 5 BASIC7.2□□□□□ -1.26
HLA-CQ95604 LINC02535-201ENST00000455071 2513 ntTSL 2 BASIC7.2□□□□□ -1.26
HLA-CQ95604 AL353807.3-201ENST00000500626 2505 ntBASIC7.2□□□□□ -1.26
HLA-CQ95604 ZNF192P1-201ENST00000440790 1628 ntTSL 5 BASIC7.19□□□□□ -1.26
HLA-CQ95604 TTTY10-202ENST00000455084 1628 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
HLA-CQ95604 MFSD8-218ENST00000641186 4448 ntBASIC7.19□□□□□ -1.26
HLA-CQ95604 DOCK11-201ENST00000276202 6625 ntAPPRIS P2 TSL 1 (best) BASIC7.19□□□□□ -1.26
HLA-CQ95604 NNT-201ENST00000264663 6483 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
HLA-CQ95604 GNRHR-201ENST00000226413 2164 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
HLA-CQ95604 AL627309.5-201ENST00000484859 4860 ntTSL 5 BASIC7.19□□□□□ -1.26
HLA-CQ95604 TNRC6A-201ENST00000315183 8303 ntAPPRIS ALT2 TSL 5 BASIC7.19□□□□□ -1.26
HLA-CQ95604 ZNF807-201ENST00000328088 1707 ntBASIC7.19□□□□□ -1.26
HLA-CQ95604 LINC01492-201ENST00000411575 3738 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
HLA-CQ95604 KIAA2012-204ENST00000498697 3772 ntAPPRIS ALT2 TSL 5 BASIC7.19□□□□□ -1.26
HLA-CQ95604 CDC42SE1-201ENST00000357235 3045 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
HLA-CQ95604 LINC00663-203ENST00000586885 2546 ntBASIC7.19□□□□□ -1.26
HLA-CQ95604 AMZ2-206ENST00000577985 2257 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
HLA-CQ95604 B3GALT1-201ENST00000392690 5094 ntAPPRIS P1 BASIC7.19□□□□□ -1.26
HLA-CQ95604 POGZ-205ENST00000409503 4813 ntAPPRIS ALT1 TSL 2 BASIC7.19□□□□□ -1.26
HLA-CQ95604 RPL12P13-201ENST00000310055 497 ntBASIC7.19□□□□□ -1.26
HLA-CQ95604 PPIAP26-201ENST00000377951 522 ntBASIC7.19□□□□□ -1.26
HLA-CQ95604 Y_RNA.482-201ENST00000384377 111 ntBASIC7.19□□□□□ -1.26
HLA-CQ95604 IGLV5-48-201ENST00000390293 369 ntAPPRIS P1 BASIC7.19□□□□□ -1.26
HLA-CQ95604 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
HLA-CQ95604 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
HLA-CQ95604 AL139397.2-201ENST00000404529 772 ntBASIC7.19□□□□□ -1.26
HLA-CQ95604 OR6C66P-201ENST00000414917 930 ntBASIC7.19□□□□□ -1.26
HLA-CQ95604 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC7.19□□□□□ -1.26
HLA-CQ95604 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC7.19□□□□□ -1.26
HLA-CQ95604 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC7.19□□□□□ -1.26
HLA-CQ95604 AC002486.2-201ENST00000447806 590 ntBASIC7.19□□□□□ -1.26
HLA-CQ95604 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC7.19□□□□□ -1.26
HLA-CQ95604 AC009963.3-201ENST00000458090 486 ntBASIC7.19□□□□□ -1.26
HLA-CQ95604 RPL35AP28-201ENST00000459730 331 ntBASIC7.19□□□□□ -1.26
HLA-CQ95604 SNX18P23-201ENST00000510867 677 ntBASIC7.19□□□□□ -1.26
HLA-CQ95604 RNU6-566P-201ENST00000516790 107 ntBASIC7.19□□□□□ -1.26
HLA-CQ95604 SNRPCP6-201ENST00000528310 210 ntBASIC7.19□□□□□ -1.26
HLA-CQ95604 AP000907.2-201ENST00000530827 353 ntBASIC7.19□□□□□ -1.26
HLA-CQ95604 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC7.19□□□□□ -1.26
HLA-CQ95604 LINC02366-202ENST00000541949 696 ntTSL 3 BASIC7.19□□□□□ -1.26
HLA-CQ95604 AC006581.1-201ENST00000545706 496 ntTSL 3 BASIC7.19□□□□□ -1.26
HLA-CQ95604 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC7.19□□□□□ -1.26
HLA-CQ95604 BICD1-206ENST00000551086 423 ntTSL 3 BASIC7.19□□□□□ -1.26
HLA-CQ95604 RPL21P12-201ENST00000559810 515 ntBASIC7.19□□□□□ -1.26
HLA-CQ95604 GLUD1P4-201ENST00000590914 418 ntBASIC7.19□□□□□ -1.26
HLA-CQ95604 AC008687.2-201ENST00000597865 520 ntBASIC7.19□□□□□ -1.26
HLA-CQ95604 TEX41-238ENST00000604253 709 ntTSL 5 BASIC7.19□□□□□ -1.26
HLA-CQ95604 AL590032.1-201ENST00000604920 252 ntBASIC7.19□□□□□ -1.26
HLA-CQ95604 uc_338.12-201ENST00000616344 181 ntBASIC7.19□□□□□ -1.26
HLA-CQ95604 AC098657.3-201ENST00000620434 263 ntBASIC7.19□□□□□ -1.26
HLA-CQ95604 RFX5-201ENST00000290524 3576 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
HLA-CQ95604 AGTPBP1-202ENST00000357081 4393 ntTSL 5 BASIC7.19□□□□□ -1.26
HLA-CQ95604 AP000688.2-201ENST00000422473 2336 ntTSL 2 BASIC7.19□□□□□ -1.26
HLA-CQ95604 RNPC3-208ENST00000533099 3641 ntAPPRIS P2 TSL 5 BASIC7.19□□□□□ -1.26
HLA-CQ95604 AC004672.1-201ENST00000513082 2088 ntTSL 5 BASIC7.19□□□□□ -1.26
HLA-CQ95604 ACKR2-202ENST00000442925 2879 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
HLA-CQ95604 ASB8-201ENST00000317697 2615 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
HLA-CQ95604 GABPB2-202ENST00000368918 8964 ntAPPRIS P3 TSL 1 (best) BASIC7.19□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 155.5 ms