Protein–RNA interactions for Protein: Q8WWI5

SLC44A1, Choline transporter-like protein 1, humanhuman

Predictions only

Length 657 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1Q8WWI5 AC090506.2-201ENST00000624521 419 ntBASIC4.72□□□□□ -1.65
SLC44A1Q8WWI5 CRNDE-213ENST00000635991 546 ntTSL 5 BASIC4.72□□□□□ -1.65
SLC44A1Q8WWI5 AC132825.7-201ENST00000638744 335 ntBASIC4.72□□□□□ -1.65
SLC44A1Q8WWI5 AL132640.2-201ENST00000559968 1698 ntBASIC4.72□□□□□ -1.65
SLC44A1Q8WWI5 MAPK10-286ENST00000641208 8747 ntBASIC4.72□□□□□ -1.65
SLC44A1Q8WWI5 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC4.72□□□□□ -1.65
SLC44A1Q8WWI5 AL136164.3-201ENST00000624429 3978 ntBASIC4.72□□□□□ -1.65
SLC44A1Q8WWI5 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC4.72□□□□□ -1.65
SLC44A1Q8WWI5 LMNTD1-207ENST00000539744 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
SLC44A1Q8WWI5 AL354733.2-209ENST00000589233 1434 ntTSL 2 BASIC4.72□□□□□ -1.65
SLC44A1Q8WWI5 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC4.71□□□□□ -1.65
SLC44A1Q8WWI5 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC4.71□□□□□ -1.65
SLC44A1Q8WWI5 SUPT16HP1-201ENST00000537175 3133 ntBASIC4.71□□□□□ -1.66
SLC44A1Q8WWI5 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
SLC44A1Q8WWI5 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
SLC44A1Q8WWI5 OR52B1P-201ENST00000316506 909 ntBASIC4.71□□□□□ -1.66
SLC44A1Q8WWI5 RNU6-666P-201ENST00000363499 107 ntBASIC4.71□□□□□ -1.66
SLC44A1Q8WWI5 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
SLC44A1Q8WWI5 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
SLC44A1Q8WWI5 HDGFP1-201ENST00000405943 252 ntBASIC4.71□□□□□ -1.66
SLC44A1Q8WWI5 RNA5SP146-201ENST00000410743 123 ntBASIC4.71□□□□□ -1.66
SLC44A1Q8WWI5 AL365184.1-201ENST00000413801 572 ntTSL 3 BASIC4.71□□□□□ -1.66
SLC44A1Q8WWI5 CLYBL-AS1-201ENST00000416009 621 ntTSL 3 BASIC4.71□□□□□ -1.66
SLC44A1Q8WWI5 AC004690.1-201ENST00000418216 328 ntBASIC4.71□□□□□ -1.66
SLC44A1Q8WWI5 AL391069.1-201ENST00000422153 358 ntTSL 3 BASIC4.71□□□□□ -1.66
SLC44A1Q8WWI5 MTCO2P17-201ENST00000424336 677 ntBASIC4.71□□□□□ -1.66
SLC44A1Q8WWI5 RAB3GAP1-202ENST00000425393 1139 ntTSL 2 BASIC4.71□□□□□ -1.66
SLC44A1Q8WWI5 AC007403.1-201ENST00000427579 567 ntTSL 4 BASIC4.71□□□□□ -1.66
SLC44A1Q8WWI5 MTCO1P52-201ENST00000433928 531 ntBASIC4.71□□□□□ -1.66
SLC44A1Q8WWI5 TRAPPC13P1-201ENST00000435991 1062 ntBASIC4.71□□□□□ -1.66
SLC44A1Q8WWI5 PSMD10P3-201ENST00000437000 448 ntBASIC4.71□□□□□ -1.66
SLC44A1Q8WWI5 DMD-AS3-201ENST00000439592 293 ntTSL 3 BASIC4.71□□□□□ -1.66
SLC44A1Q8WWI5 RPL12P3-201ENST00000440080 396 ntBASIC4.71□□□□□ -1.66
SLC44A1Q8WWI5 AC018467.1-203ENST00000440785 506 ntTSL 3 BASIC4.71□□□□□ -1.66
SLC44A1Q8WWI5 RRM2P4-201ENST00000441721 562 ntBASIC4.71□□□□□ -1.66
SLC44A1Q8WWI5 CEACAMP7-201ENST00000444105 496 ntBASIC4.71□□□□□ -1.66
SLC44A1Q8WWI5 AL137005.1-201ENST00000452944 719 ntTSL 5 BASIC4.71□□□□□ -1.66
SLC44A1Q8WWI5 AC108022.1-201ENST00000493466 478 ntBASIC4.71□□□□□ -1.66
SLC44A1Q8WWI5 AC025164.1-201ENST00000496249 478 ntBASIC4.71□□□□□ -1.66
SLC44A1Q8WWI5 AC140172.1-201ENST00000502928 141 ntBASIC4.71□□□□□ -1.66
SLC44A1Q8WWI5 AC026414.1-201ENST00000504046 698 ntBASIC4.71□□□□□ -1.66
SLC44A1Q8WWI5 AC010395.1-201ENST00000507627 697 ntTSL 5 BASIC4.71□□□□□ -1.66
SLC44A1Q8WWI5 AC012625.1-201ENST00000515153 625 ntTSL 5 BASIC4.71□□□□□ -1.66
SLC44A1Q8WWI5 RN7SKP66-201ENST00000516681 231 ntBASIC4.71□□□□□ -1.66
SLC44A1Q8WWI5 RNU6ATAC24P-201ENST00000516811 135 ntBASIC4.71□□□□□ -1.66
SLC44A1Q8WWI5 MTND2P32-201ENST00000521584 1038 ntBASIC4.71□□□□□ -1.66
SLC44A1Q8WWI5 AC023442.2-201ENST00000526455 270 ntTSL 3 BASIC4.71□□□□□ -1.66
SLC44A1Q8WWI5 AP003110.1-201ENST00000526976 717 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
SLC44A1Q8WWI5 AP005436.3-201ENST00000532849 572 ntTSL 5 BASIC4.71□□□□□ -1.66
SLC44A1Q8WWI5 AC133555.2-201ENST00000550213 292 ntBASIC4.71□□□□□ -1.66
SLC44A1Q8WWI5 GPATCH2L-203ENST00000553588 776 ntTSL 2 BASIC4.71□□□□□ -1.66
SLC44A1Q8WWI5 HMGB2P1-201ENST00000591146 634 ntBASIC4.71□□□□□ -1.66
SLC44A1Q8WWI5 AL606834.3-201ENST00000602615 496 ntBASIC4.71□□□□□ -1.66
SLC44A1Q8WWI5 AC006237.1-201ENST00000603816 480 ntTSL 3 BASIC4.71□□□□□ -1.66
SLC44A1Q8WWI5 AC024940.4-201ENST00000605507 246 ntBASIC4.71□□□□□ -1.66
SLC44A1Q8WWI5 AC048338.2-201ENST00000623601 684 ntTSL 5 BASIC4.71□□□□□ -1.66
SLC44A1Q8WWI5 MEG8-222ENST00000637332 1237 ntTSL 5 BASIC4.71□□□□□ -1.66
SLC44A1Q8WWI5 ZNRD1ASP-221ENST00000637794 1074 ntBASIC4.71□□□□□ -1.66
SLC44A1Q8WWI5 IQCH-214ENST00000629425 1822 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
SLC44A1Q8WWI5 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
SLC44A1Q8WWI5 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC4.71□□□□□ -1.66
SLC44A1Q8WWI5 MTCO1P18-201ENST00000455518 1419 ntBASIC4.71□□□□□ -1.66
SLC44A1Q8WWI5 UGT2B10-202ENST00000458688 1424 ntTSL 2 BASIC4.71□□□□□ -1.66
SLC44A1Q8WWI5 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC4.71□□□□□ -1.66
SLC44A1Q8WWI5 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC4.7□□□□□ -1.66
SLC44A1Q8WWI5 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
SLC44A1Q8WWI5 AL138828.1-203ENST00000419926 1570 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
SLC44A1Q8WWI5 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
SLC44A1Q8WWI5 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
SLC44A1Q8WWI5 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
SLC44A1Q8WWI5 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC4.7□□□□□ -1.66
SLC44A1Q8WWI5 NEAT1-202ENST00000501122 22743 ntBASIC4.7□□□□□ -1.66
SLC44A1Q8WWI5 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
SLC44A1Q8WWI5 CSTA-201ENST00000264474 751 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
SLC44A1Q8WWI5 METTL21EP-201ENST00000298105 713 ntBASIC4.7□□□□□ -1.66
SLC44A1Q8WWI5 RNU6-185P-201ENST00000384421 107 ntBASIC4.7□□□□□ -1.66
SLC44A1Q8WWI5 RNU6-244P-201ENST00000391028 104 ntBASIC4.7□□□□□ -1.66
SLC44A1Q8WWI5 HMGB3P31-201ENST00000413333 595 ntBASIC4.7□□□□□ -1.66
SLC44A1Q8WWI5 AC093158.1-201ENST00000415549 791 ntTSL 3 BASIC4.7□□□□□ -1.66
SLC44A1Q8WWI5 AC073136.2-201ENST00000417282 849 ntBASIC4.7□□□□□ -1.66
SLC44A1Q8WWI5 CYCSP10-201ENST00000417973 294 ntBASIC4.7□□□□□ -1.66
SLC44A1Q8WWI5 AC093162.1-201ENST00000419682 124 ntBASIC4.7□□□□□ -1.66
SLC44A1Q8WWI5 ITGA9-AS1-202ENST00000420870 581 ntTSL 4 BASIC4.7□□□□□ -1.66
SLC44A1Q8WWI5 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC4.7□□□□□ -1.66
SLC44A1Q8WWI5 AC093422.3-201ENST00000428506 305 ntBASIC4.7□□□□□ -1.66
SLC44A1Q8WWI5 RPL21P91-201ENST00000429231 479 ntBASIC4.7□□□□□ -1.66
SLC44A1Q8WWI5 MTND2P2-201ENST00000434633 945 ntBASIC4.7□□□□□ -1.66
SLC44A1Q8WWI5 Z80107.1-201ENST00000436830 412 ntBASIC4.7□□□□□ -1.66
SLC44A1Q8WWI5 CACYBPP1-201ENST00000438592 684 ntBASIC4.7□□□□□ -1.66
SLC44A1Q8WWI5 LINC01431-201ENST00000442440 514 ntTSL 3 BASIC4.7□□□□□ -1.66
SLC44A1Q8WWI5 AL035551.1-201ENST00000446931 348 ntBASIC4.7□□□□□ -1.66
SLC44A1Q8WWI5 AC073850.1-201ENST00000449243 255 ntBASIC4.7□□□□□ -1.66
SLC44A1Q8WWI5 AL355592.1-201ENST00000450292 386 ntTSL 2 BASIC4.7□□□□□ -1.66
SLC44A1Q8WWI5 LINC01767-201ENST00000451914 545 ntTSL 2 BASIC4.7□□□□□ -1.66
SLC44A1Q8WWI5 AC234781.3-201ENST00000452540 973 ntBASIC4.7□□□□□ -1.66
SLC44A1Q8WWI5 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC4.7□□□□□ -1.66
SLC44A1Q8WWI5 AL390783.1-203ENST00000457058 248 ntTSL 3 BASIC4.7□□□□□ -1.66
SLC44A1Q8WWI5 RN7SL41P-201ENST00000476144 297 ntBASIC4.7□□□□□ -1.66
SLC44A1Q8WWI5 AC025566.1-201ENST00000477153 490 ntTSL 3 BASIC4.7□□□□□ -1.66
SLC44A1Q8WWI5 AC109462.1-201ENST00000491087 368 ntBASIC4.7□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 101.3 ms