Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 FMR1-IT1-201ENST00000441414 343 ntTSL 5 BASIC2.79□□□□□ -1.96
ALMS1Q8TCU4 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC2.79□□□□□ -1.96
ALMS1Q8TCU4 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC2.79□□□□□ -1.96
ALMS1Q8TCU4 U3.45-201ENST00000607547 219 ntBASIC2.79□□□□□ -1.96
ALMS1Q8TCU4 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC2.79□□□□□ -1.96
ALMS1Q8TCU4 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
ALMS1Q8TCU4 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
ALMS1Q8TCU4 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC2.79□□□□□ -1.96
ALMS1Q8TCU4 C1orf100-201ENST00000308105 579 ntAPPRIS P1 TSL 2 BASIC2.79□□□□□ -1.96
ALMS1Q8TCU4 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC2.79□□□□□ -1.96
ALMS1Q8TCU4 AL122016.1-201ENST00000403365 367 ntBASIC2.79□□□□□ -1.96
ALMS1Q8TCU4 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
ALMS1Q8TCU4 RPL21P91-201ENST00000429231 479 ntBASIC2.79□□□□□ -1.96
ALMS1Q8TCU4 AC004938.1-201ENST00000438468 308 ntBASIC2.79□□□□□ -1.96
ALMS1Q8TCU4 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC2.79□□□□□ -1.96
ALMS1Q8TCU4 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC2.79□□□□□ -1.96
ALMS1Q8TCU4 AL591770.1-201ENST00000554475 1131 ntTSL 3 BASIC2.79□□□□□ -1.96
ALMS1Q8TCU4 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC2.79□□□□□ -1.96
ALMS1Q8TCU4 IMMP1LP1-201ENST00000605170 488 ntBASIC2.79□□□□□ -1.96
ALMS1Q8TCU4 AL159169.3-201ENST00000608871 561 ntBASIC2.79□□□□□ -1.96
ALMS1Q8TCU4 AP001002.2-201ENST00000625137 386 ntBASIC2.79□□□□□ -1.96
ALMS1Q8TCU4 TEX41-265ENST00000627785 704 ntTSL 5 BASIC2.79□□□□□ -1.96
ALMS1Q8TCU4 TEX41-280ENST00000629185 591 ntTSL 5 BASIC2.79□□□□□ -1.96
ALMS1Q8TCU4 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC2.79□□□□□ -1.96
ALMS1Q8TCU4 IQCM-205ENST00000636414 1844 ntAPPRIS ALT2 TSL 5 BASIC2.79□□□□□ -1.96
ALMS1Q8TCU4 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
ALMS1Q8TCU4 PIK3CB-201ENST00000289153 5919 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
ALMS1Q8TCU4 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC2.79□□□□□ -1.96
ALMS1Q8TCU4 BCLAF1P2-201ENST00000624956 2609 ntBASIC2.79□□□□□ -1.96
ALMS1Q8TCU4 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC2.79□□□□□ -1.96
ALMS1Q8TCU4 AL592291.1-201ENST00000403830 352 ntBASIC2.79□□□□□ -1.96
ALMS1Q8TCU4 AC018731.1-201ENST00000447078 576 ntTSL 4 BASIC2.79□□□□□ -1.96
ALMS1Q8TCU4 AC008155.2-201ENST00000464337 397 ntBASIC2.79□□□□□ -1.96
ALMS1Q8TCU4 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC2.79□□□□□ -1.96
ALMS1Q8TCU4 RPL21P6-201ENST00000479171 504 ntBASIC2.79□□□□□ -1.96
ALMS1Q8TCU4 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC2.79□□□□□ -1.96
ALMS1Q8TCU4 CYCSP40-201ENST00000575927 294 ntBASIC2.79□□□□□ -1.96
ALMS1Q8TCU4 FAM49B-229ENST00000615041 750 ntTSL 5 BASIC2.79□□□□□ -1.96
ALMS1Q8TCU4 DCC-202ENST00000412726 9525 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
ALMS1Q8TCU4 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
ALMS1Q8TCU4 IL6ST-212ENST00000522633 1878 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
ALMS1Q8TCU4 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
ALMS1Q8TCU4 AMOT-203ENST00000371959 7319 ntAPPRIS ALT2 TSL 1 (best) BASIC2.79□□□□□ -1.96
ALMS1Q8TCU4 DICER1-202ENST00000393063 10220 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
ALMS1Q8TCU4 RNU1-83P-201ENST00000363426 164 ntBASIC2.79□□□□□ -1.96
ALMS1Q8TCU4 AC108032.1-201ENST00000416706 207 ntBASIC2.79□□□□□ -1.96
ALMS1Q8TCU4 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC2.79□□□□□ -1.96
ALMS1Q8TCU4 NUDT7-202ENST00000437314 930 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
ALMS1Q8TCU4 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC2.79□□□□□ -1.96
ALMS1Q8TCU4 UBDP1-202ENST00000457888 382 ntBASIC2.79□□□□□ -1.96
ALMS1Q8TCU4 PRELID3BP6-201ENST00000503839 571 ntBASIC2.79□□□□□ -1.96
ALMS1Q8TCU4 WBP1LP4-201ENST00000505043 344 ntBASIC2.79□□□□□ -1.96
ALMS1Q8TCU4 AC097534.1-201ENST00000507803 521 ntTSL 4 BASIC2.79□□□□□ -1.96
ALMS1Q8TCU4 LINC02466-202ENST00000509105 653 ntTSL 3 BASIC2.79□□□□□ -1.96
ALMS1Q8TCU4 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC2.79□□□□□ -1.96
ALMS1Q8TCU4 AC105020.2-201ENST00000564683 572 ntTSL 5 BASIC2.79□□□□□ -1.96
ALMS1Q8TCU4 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
ALMS1Q8TCU4 LINC02060-201ENST00000506041 1626 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
ALMS1Q8TCU4 ZNF607-202ENST00000395835 4003 ntAPPRIS ALT2 TSL 2 BASIC2.78□□□□□ -1.96
ALMS1Q8TCU4 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC2.78□□□□□ -1.96
ALMS1Q8TCU4 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
ALMS1Q8TCU4 CA1-225ENST00000626824 2405 ntTSL 5 BASIC2.78□□□□□ -1.96
ALMS1Q8TCU4 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC2.78□□□□□ -1.96
ALMS1Q8TCU4 SNORD3H-201ENST00000384486 214 ntBASIC2.78□□□□□ -1.96
ALMS1Q8TCU4 FCF1P5-201ENST00000406490 482 ntBASIC2.78□□□□□ -1.96
ALMS1Q8TCU4 MIR1179-201ENST00000408703 91 ntBASIC2.78□□□□□ -1.96
ALMS1Q8TCU4 AL590006.1-201ENST00000417390 752 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
ALMS1Q8TCU4 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC2.78□□□□□ -1.96
ALMS1Q8TCU4 AL133244.1-201ENST00000456007 258 ntBASIC2.78□□□□□ -1.96
ALMS1Q8TCU4 UBE2CP3-201ENST00000502715 450 ntBASIC2.78□□□□□ -1.96
ALMS1Q8TCU4 AC093853.1-201ENST00000515689 483 ntBASIC2.78□□□□□ -1.96
ALMS1Q8TCU4 PCAT1-201ENST00000519319 734 ntTSL 2 BASIC2.78□□□□□ -1.96
ALMS1Q8TCU4 AC022882.1-201ENST00000532142 501 ntBASIC2.78□□□□□ -1.96
ALMS1Q8TCU4 PLCB4-201ENST00000278655 5430 ntAPPRIS ALT1 TSL 1 (best) BASIC2.78□□□□□ -1.96
ALMS1Q8TCU4 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC2.78□□□□□ -1.96
ALMS1Q8TCU4 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
ALMS1Q8TCU4 TCF4-284ENST00000637169 7553 ntTSL 5 BASIC2.78□□□□□ -1.96
ALMS1Q8TCU4 AL672167.1-205ENST00000641112 3080 ntBASIC2.78□□□□□ -1.96
ALMS1Q8TCU4 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
ALMS1Q8TCU4 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
ALMS1Q8TCU4 CYCSP53-201ENST00000455540 265 ntBASIC2.78□□□□□ -1.96
ALMS1Q8TCU4 AC092691.2-201ENST00000461787 803 ntBASIC2.78□□□□□ -1.96
ALMS1Q8TCU4 RN7SL601P-201ENST00000471221 293 ntBASIC2.78□□□□□ -1.96
ALMS1Q8TCU4 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC2.78□□□□□ -1.96
ALMS1Q8TCU4 YPEL5P3-201ENST00000547227 352 ntBASIC2.78□□□□□ -1.96
ALMS1Q8TCU4 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC2.78□□□□□ -1.96
ALMS1Q8TCU4 AL139395.1-201ENST00000603662 160 ntBASIC2.78□□□□□ -1.96
ALMS1Q8TCU4 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
ALMS1Q8TCU4 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
ALMS1Q8TCU4 ZNF292-202ENST00000369577 10610 ntAPPRIS P2 TSL 1 (best) BASIC2.78□□□□□ -1.96
ALMS1Q8TCU4 SPHKAP-201ENST00000344657 6804 ntAPPRIS P3 TSL 1 (best) BASIC2.78□□□□□ -1.96
ALMS1Q8TCU4 GCSAML-210ENST00000536561 4063 ntAPPRIS P3 TSL 4 BASIC2.78□□□□□ -1.96
ALMS1Q8TCU4 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC2.78□□□□□ -1.96
ALMS1Q8TCU4 GALNT5-201ENST00000259056 6171 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
ALMS1Q8TCU4 ZNF962P-201ENST00000443465 3140 ntBASIC2.78□□□□□ -1.96
ALMS1Q8TCU4 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC2.78□□□□□ -1.96
ALMS1Q8TCU4 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
ALMS1Q8TCU4 RNA5SP22-201ENST00000365393 109 ntBASIC2.78□□□□□ -1.97
ALMS1Q8TCU4 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC2.78□□□□□ -1.97
ALMS1Q8TCU4 SERPINA7P1-201ENST00000443077 631 ntBASIC2.78□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 83.1 ms