Protein–RNA interactions for Protein: Q8NDZ2

SIMC1, SUMO-interacting motif-containing protein 1, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1Q8NDZ2 AC108475.1-201ENST00000507880 950 ntBASIC5.27□□□□□ -1.57
SIMC1Q8NDZ2 AC074255.1-201ENST00000511259 501 ntBASIC5.27□□□□□ -1.57
SIMC1Q8NDZ2 GAPDHP62-201ENST00000515313 990 ntBASIC5.27□□□□□ -1.57
SIMC1Q8NDZ2 SNORA43.3-201ENST00000517240 103 ntBASIC5.27□□□□□ -1.57
SIMC1Q8NDZ2 SMARCE1P4-201ENST00000523647 241 ntBASIC5.27□□□□□ -1.57
SIMC1Q8NDZ2 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
SIMC1Q8NDZ2 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
SIMC1Q8NDZ2 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC5.27□□□□□ -1.57
SIMC1Q8NDZ2 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC5.27□□□□□ -1.57
SIMC1Q8NDZ2 MIR4472-2-201ENST00000582069 67 ntBASIC5.27□□□□□ -1.57
SIMC1Q8NDZ2 AC090616.2-202ENST00000584248 222 ntBASIC5.27□□□□□ -1.57
SIMC1Q8NDZ2 MIR3936-201ENST00000584304 110 ntBASIC5.27□□□□□ -1.57
SIMC1Q8NDZ2 AC002398.1-201ENST00000589397 427 ntTSL 5 BASIC5.27□□□□□ -1.57
SIMC1Q8NDZ2 ZNF561-AS1-207ENST00000591932 676 ntTSL 5 BASIC5.27□□□□□ -1.57
SIMC1Q8NDZ2 SATB1-AS1-222ENST00000600177 751 ntTSL 5 BASIC5.27□□□□□ -1.57
SIMC1Q8NDZ2 IGKV1OR2-9-201ENST00000603957 287 ntBASIC5.27□□□□□ -1.57
SIMC1Q8NDZ2 IGKV1OR2-11-201ENST00000604120 287 ntBASIC5.27□□□□□ -1.57
SIMC1Q8NDZ2 AC010200.2-201ENST00000605098 235 ntBASIC5.27□□□□□ -1.57
SIMC1Q8NDZ2 AL357078.3-201ENST00000607528 618 ntBASIC5.27□□□□□ -1.57
SIMC1Q8NDZ2 AC009237.15-201ENST00000610252 501 ntBASIC5.27□□□□□ -1.57
SIMC1Q8NDZ2 AC015804.1-201ENST00000622935 435 ntBASIC5.27□□□□□ -1.57
SIMC1Q8NDZ2 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC5.27□□□□□ -1.57
SIMC1Q8NDZ2 AC005972.4-201ENST00000636248 1131 ntTSL 5 BASIC5.27□□□□□ -1.57
SIMC1Q8NDZ2 PIGX-210ENST00000639143 831 ntAPPRIS ALT2 TSL 2 BASIC5.27□□□□□ -1.57
SIMC1Q8NDZ2 IGLV10-54-202ENST00000640991 351 ntTSL 5 BASIC5.27□□□□□ -1.57
SIMC1Q8NDZ2 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC5.27□□□□□ -1.57
SIMC1Q8NDZ2 WDPCP-203ENST00000409120 5408 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
SIMC1Q8NDZ2 DCN-202ENST00000393155 2133 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
SIMC1Q8NDZ2 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
SIMC1Q8NDZ2 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC5.27□□□□□ -1.57
SIMC1Q8NDZ2 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
SIMC1Q8NDZ2 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
SIMC1Q8NDZ2 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
SIMC1Q8NDZ2 ADAM2-207ENST00000622267 2480 ntAPPRIS ALT2 TSL 2 BASIC5.26□□□□□ -1.57
SIMC1Q8NDZ2 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC5.26□□□□□ -1.57
SIMC1Q8NDZ2 OR10G7-202ENST00000641585 3449 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
SIMC1Q8NDZ2 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC5.26□□□□□ -1.57
SIMC1Q8NDZ2 C12orf50-201ENST00000298699 1722 ntAPPRIS P1 TSL 2 BASIC5.26□□□□□ -1.57
SIMC1Q8NDZ2 THAP12P5-201ENST00000405864 2275 ntBASIC5.26□□□□□ -1.57
SIMC1Q8NDZ2 CREM-206ENST00000354759 1589 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
SIMC1Q8NDZ2 DLG1-213ENST00000443183 2516 ntTSL 2 BASIC5.26□□□□□ -1.57
SIMC1Q8NDZ2 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC5.26□□□□□ -1.57
SIMC1Q8NDZ2 CD164-207ENST00000504373 1402 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
SIMC1Q8NDZ2 ADH4-207ENST00000505590 1400 ntTSL 5 BASIC5.26□□□□□ -1.57
SIMC1Q8NDZ2 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
SIMC1Q8NDZ2 RNU6-553P-201ENST00000364047 96 ntBASIC5.26□□□□□ -1.57
SIMC1Q8NDZ2 IFNA21-201ENST00000380225 1024 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
SIMC1Q8NDZ2 MTCO1P56-201ENST00000401674 224 ntBASIC5.26□□□□□ -1.57
SIMC1Q8NDZ2 AL391361.1-201ENST00000405580 489 ntBASIC5.26□□□□□ -1.57
SIMC1Q8NDZ2 RPS7P9-201ENST00000414704 586 ntBASIC5.26□□□□□ -1.57
SIMC1Q8NDZ2 TRAPPC2P10-201ENST00000415662 323 ntBASIC5.26□□□□□ -1.57
SIMC1Q8NDZ2 AL020993.1-201ENST00000420172 297 ntTSL 3 BASIC5.26□□□□□ -1.57
SIMC1Q8NDZ2 RPL7P53-201ENST00000421245 739 ntBASIC5.26□□□□□ -1.57
SIMC1Q8NDZ2 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC5.26□□□□□ -1.57
SIMC1Q8NDZ2 AL022331.1-201ENST00000429025 477 ntBASIC5.26□□□□□ -1.57
SIMC1Q8NDZ2 AL121759.1-201ENST00000434043 795 ntTSL 5 BASIC5.26□□□□□ -1.57
SIMC1Q8NDZ2 AL627308.1-201ENST00000435693 821 ntBASIC5.26□□□□□ -1.57
SIMC1Q8NDZ2 AC006335.2-201ENST00000437993 330 ntBASIC5.26□□□□□ -1.57
SIMC1Q8NDZ2 AC012368.1-201ENST00000438115 552 ntTSL 3 BASIC5.26□□□□□ -1.57
SIMC1Q8NDZ2 ACTR3P2-201ENST00000439585 1257 ntBASIC5.26□□□□□ -1.57
SIMC1Q8NDZ2 AC007327.2-201ENST00000440788 457 ntTSL 3 BASIC5.26□□□□□ -1.57
SIMC1Q8NDZ2 AC009263.1-201ENST00000441193 1239 ntBASIC5.26□□□□□ -1.57
SIMC1Q8NDZ2 AC114877.1-201ENST00000446601 582 ntTSL 4 BASIC5.26□□□□□ -1.57
SIMC1Q8NDZ2 AL050341.1-201ENST00000447743 313 ntBASIC5.26□□□□□ -1.57
SIMC1Q8NDZ2 AC005518.1-201ENST00000448131 1116 ntTSL 2 BASIC5.26□□□□□ -1.57
SIMC1Q8NDZ2 EIF4A1P11-201ENST00000451239 222 ntBASIC5.26□□□□□ -1.57
SIMC1Q8NDZ2 TMSB4X-204ENST00000451311 628 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
SIMC1Q8NDZ2 MEMO1P4-201ENST00000453590 386 ntBASIC5.26□□□□□ -1.57
SIMC1Q8NDZ2 YWHAEP1-201ENST00000453697 763 ntBASIC5.26□□□□□ -1.57
SIMC1Q8NDZ2 SPRR2F-201ENST00000468739 681 ntAPPRIS P1 TSL 3 BASIC5.26□□□□□ -1.57
SIMC1Q8NDZ2 RPL5P22-201ENST00000480199 884 ntBASIC5.26□□□□□ -1.57
SIMC1Q8NDZ2 RPL7P6-201ENST00000480903 738 ntBASIC5.26□□□□□ -1.57
SIMC1Q8NDZ2 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC5.26□□□□□ -1.57
SIMC1Q8NDZ2 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
SIMC1Q8NDZ2 ENPP7P11-201ENST00000505915 627 ntBASIC5.26□□□□□ -1.57
SIMC1Q8NDZ2 AC098829.1-202ENST00000513384 537 ntTSL 3 BASIC5.26□□□□□ -1.57
SIMC1Q8NDZ2 PRELID3BP4-201ENST00000515476 571 ntBASIC5.26□□□□□ -1.57
SIMC1Q8NDZ2 AC099550.1-201ENST00000515495 871 ntTSL 3 BASIC5.26□□□□□ -1.57
SIMC1Q8NDZ2 AC108863.1-201ENST00000520863 650 ntTSL 3 BASIC5.26□□□□□ -1.57
SIMC1Q8NDZ2 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC5.26□□□□□ -1.57
SIMC1Q8NDZ2 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
SIMC1Q8NDZ2 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC5.26□□□□□ -1.57
SIMC1Q8NDZ2 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC5.26□□□□□ -1.57
SIMC1Q8NDZ2 PCNPP1-201ENST00000552501 511 ntBASIC5.26□□□□□ -1.57
SIMC1Q8NDZ2 DNAL1-206ENST00000554871 632 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
SIMC1Q8NDZ2 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC5.26□□□□□ -1.57
SIMC1Q8NDZ2 AC027130.1-201ENST00000564490 686 ntTSL 2 BASIC5.26□□□□□ -1.57
SIMC1Q8NDZ2 LINC02168-201ENST00000565327 352 ntTSL 2 BASIC5.26□□□□□ -1.57
SIMC1Q8NDZ2 AC055855.2-201ENST00000565993 500 ntTSL 2 BASIC5.26□□□□□ -1.57
SIMC1Q8NDZ2 CYP2C60P-201ENST00000566088 139 ntBASIC5.26□□□□□ -1.57
SIMC1Q8NDZ2 PDCD6IPP2-207ENST00000566321 1069 ntBASIC5.26□□□□□ -1.57
SIMC1Q8NDZ2 AC002400.1-201ENST00000569310 726 ntBASIC5.26□□□□□ -1.57
SIMC1Q8NDZ2 SNORD95-201ENST00000579879 68 ntBASIC5.26□□□□□ -1.57
SIMC1Q8NDZ2 AC022662.1-201ENST00000580252 331 ntBASIC5.26□□□□□ -1.57
SIMC1Q8NDZ2 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC5.26□□□□□ -1.57
SIMC1Q8NDZ2 ZNF540-204ENST00000586792 564 ntTSL 3 BASIC5.26□□□□□ -1.57
SIMC1Q8NDZ2 RSL24D1P11-201ENST00000591045 491 ntBASIC5.26□□□□□ -1.57
SIMC1Q8NDZ2 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC5.26□□□□□ -1.57
SIMC1Q8NDZ2 SUMO2P15-201ENST00000604285 278 ntBASIC5.26□□□□□ -1.57
SIMC1Q8NDZ2 AC106791.2-201ENST00000604680 391 ntBASIC5.26□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 107.2 ms