Protein–RNA interactions for Protein: Q8N4M1

SLC44A3, Choline transporter-like protein 3, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A3Q8N4M1 BZW1P2-201ENST00000473537 826 ntBASIC5.35□□□□□ -1.55
SLC44A3Q8N4M1 LINC02215-201ENST00000503320 543 ntTSL 4 BASIC5.35□□□□□ -1.55
SLC44A3Q8N4M1 COX6B1P5-201ENST00000509843 249 ntBASIC5.35□□□□□ -1.55
SLC44A3Q8N4M1 NDUFB4P12-201ENST00000513465 390 ntBASIC5.35□□□□□ -1.55
SLC44A3Q8N4M1 GAPDHP62-201ENST00000515313 990 ntBASIC5.35□□□□□ -1.55
SLC44A3Q8N4M1 RNU6-1334P-201ENST00000516032 105 ntBASIC5.35□□□□□ -1.55
SLC44A3Q8N4M1 AC108863.1-201ENST00000520863 650 ntTSL 3 BASIC5.35□□□□□ -1.55
SLC44A3Q8N4M1 MAL2-201ENST00000522112 573 ntTSL 4 BASIC5.35□□□□□ -1.55
SLC44A3Q8N4M1 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC5.35□□□□□ -1.55
SLC44A3Q8N4M1 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC5.35□□□□□ -1.55
SLC44A3Q8N4M1 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC5.35□□□□□ -1.55
SLC44A3Q8N4M1 LINC02131-201ENST00000563289 419 ntTSL 2 BASIC5.35□□□□□ -1.55
SLC44A3Q8N4M1 ZNF415P1-201ENST00000582279 1166 ntBASIC5.35□□□□□ -1.55
SLC44A3Q8N4M1 AC090616.2-202ENST00000584248 222 ntBASIC5.35□□□□□ -1.55
SLC44A3Q8N4M1 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC5.35□□□□□ -1.55
SLC44A3Q8N4M1 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
SLC44A3Q8N4M1 AC011473.2-201ENST00000596286 240 ntTSL 3 BASIC5.35□□□□□ -1.55
SLC44A3Q8N4M1 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
SLC44A3Q8N4M1 AC009027.1-201ENST00000604510 479 ntBASIC5.35□□□□□ -1.55
SLC44A3Q8N4M1 MEMO1P5-201ENST00000604810 406 ntBASIC5.35□□□□□ -1.55
SLC44A3Q8N4M1 AC092354.2-201ENST00000607786 514 ntBASIC5.35□□□□□ -1.55
SLC44A3Q8N4M1 AL355073.2-201ENST00000612106 557 ntBASIC5.35□□□□□ -1.55
SLC44A3Q8N4M1 AC083809.1-201ENST00000615051 472 ntBASIC5.35□□□□□ -1.55
SLC44A3Q8N4M1 MILR1-203ENST00000615220 1196 ntAPPRIS P3 TSL 2 BASIC5.35□□□□□ -1.55
SLC44A3Q8N4M1 HMGN2-210ENST00000619352 1148 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
SLC44A3Q8N4M1 AL359715.5-201ENST00000623431 443 ntBASIC5.35□□□□□ -1.55
SLC44A3Q8N4M1 AC090582.1-201ENST00000636321 199 ntBASIC5.35□□□□□ -1.55
SLC44A3Q8N4M1 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
SLC44A3Q8N4M1 KLHL5-202ENST00000261426 3300 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
SLC44A3Q8N4M1 AC010266.2-201ENST00000564741 3255 ntBASIC5.35□□□□□ -1.55
SLC44A3Q8N4M1 OR9K1P-202ENST00000641111 3217 ntBASIC5.35□□□□□ -1.55
SLC44A3Q8N4M1 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC5.35□□□□□ -1.55
SLC44A3Q8N4M1 AL360270.2-201ENST00000562952 5985 ntBASIC5.35□□□□□ -1.55
SLC44A3Q8N4M1 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC5.35□□□□□ -1.55
SLC44A3Q8N4M1 PAK3-213ENST00000620137 2130 ntTSL 5 BASIC5.35□□□□□ -1.55
SLC44A3Q8N4M1 LCMT1-AS2-202ENST00000565214 5666 ntBASIC5.34□□□□□ -1.55
SLC44A3Q8N4M1 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC5.34□□□□□ -1.55
SLC44A3Q8N4M1 CDY11P-201ENST00000447168 1651 ntBASIC5.34□□□□□ -1.55
SLC44A3Q8N4M1 CREM-206ENST00000354759 1589 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
SLC44A3Q8N4M1 ADGRL2-222ENST00000627151 5789 ntTSL 5 BASIC5.34□□□□□ -1.55
SLC44A3Q8N4M1 NRXN1-242ENST00000635519 3553 ntTSL 5 BASIC5.34□□□□□ -1.55
SLC44A3Q8N4M1 AC006042.3-201ENST00000454684 1469 ntBASIC5.34□□□□□ -1.55
SLC44A3Q8N4M1 AC006288.1-201ENST00000565320 1463 ntTSL 3 BASIC5.34□□□□□ -1.55
SLC44A3Q8N4M1 OR10G7-202ENST00000641585 3449 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
SLC44A3Q8N4M1 AL034549.2-201ENST00000618285 3373 ntBASIC5.34□□□□□ -1.55
SLC44A3Q8N4M1 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
SLC44A3Q8N4M1 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
SLC44A3Q8N4M1 CGA-201ENST00000369582 729 ntTSL 5 BASIC5.34□□□□□ -1.55
SLC44A3Q8N4M1 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC5.34□□□□□ -1.55
SLC44A3Q8N4M1 RNU6-157P-201ENST00000383957 107 ntBASIC5.34□□□□□ -1.55
SLC44A3Q8N4M1 SNORA40.2-201ENST00000390847 128 ntBASIC5.34□□□□□ -1.55
SLC44A3Q8N4M1 RPL10P10-201ENST00000403509 664 ntBASIC5.34□□□□□ -1.55
SLC44A3Q8N4M1 Y_RNA.604-201ENST00000410574 102 ntBASIC5.34□□□□□ -1.55
SLC44A3Q8N4M1 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC5.34□□□□□ -1.55
SLC44A3Q8N4M1 AC092652.1-202ENST00000413315 587 ntTSL 4 BASIC5.34□□□□□ -1.55
SLC44A3Q8N4M1 AP000233.1-201ENST00000426609 291 ntTSL 3 BASIC5.34□□□□□ -1.55
SLC44A3Q8N4M1 C8orf59P1-201ENST00000429930 303 ntBASIC5.34□□□□□ -1.55
SLC44A3Q8N4M1 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC5.34□□□□□ -1.55
SLC44A3Q8N4M1 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC5.34□□□□□ -1.55
SLC44A3Q8N4M1 TMEM244-202ENST00000438392 565 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
SLC44A3Q8N4M1 MTOR-AS1-202ENST00000445982 705 ntTSL 5 BASIC5.34□□□□□ -1.55
SLC44A3Q8N4M1 AC018731.1-201ENST00000447078 576 ntTSL 4 BASIC5.34□□□□□ -1.55
SLC44A3Q8N4M1 AC079760.2-201ENST00000449361 681 ntTSL 5 BASIC5.34□□□□□ -1.55
SLC44A3Q8N4M1 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC5.34□□□□□ -1.55
SLC44A3Q8N4M1 NDUFAF4P4-201ENST00000454883 502 ntBASIC5.34□□□□□ -1.55
SLC44A3Q8N4M1 NAA50-206ENST00000493454 964 ntTSL 2 BASIC5.34□□□□□ -1.55
SLC44A3Q8N4M1 AC023050.1-201ENST00000498198 304 ntBASIC5.34□□□□□ -1.55
SLC44A3Q8N4M1 AC025459.1-201ENST00000504072 156 ntBASIC5.34□□□□□ -1.55
SLC44A3Q8N4M1 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC5.34□□□□□ -1.55
SLC44A3Q8N4M1 AC062004.1-201ENST00000518706 686 ntTSL 3 BASIC5.34□□□□□ -1.55
SLC44A3Q8N4M1 AC020937.1-201ENST00000519677 1013 ntBASIC5.34□□□□□ -1.55
SLC44A3Q8N4M1 AC022874.1-201ENST00000526382 550 ntTSL 3 BASIC5.34□□□□□ -1.55
SLC44A3Q8N4M1 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC5.34□□□□□ -1.55
SLC44A3Q8N4M1 RGS5-219ENST00000528019 512 ntTSL 4 BASIC5.34□□□□□ -1.55
SLC44A3Q8N4M1 EQTN-204ENST00000537675 879 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
SLC44A3Q8N4M1 TRDN-205ENST00000546248 1179 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
SLC44A3Q8N4M1 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC5.34□□□□□ -1.55
SLC44A3Q8N4M1 LINC02402-201ENST00000550337 1212 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
SLC44A3Q8N4M1 CCDC178-208ENST00000579916 1017 ntAPPRIS ALT2 TSL 5 BASIC5.34□□□□□ -1.55
SLC44A3Q8N4M1 MIR4801-201ENST00000582704 82 ntBASIC5.34□□□□□ -1.55
SLC44A3Q8N4M1 AC009237.13-201ENST00000603193 276 ntBASIC5.34□□□□□ -1.55
SLC44A3Q8N4M1 MTCO2P22-201ENST00000603246 681 ntBASIC5.34□□□□□ -1.55
SLC44A3Q8N4M1 AC106791.2-201ENST00000604680 391 ntBASIC5.34□□□□□ -1.55
SLC44A3Q8N4M1 AC010738.1-201ENST00000604970 987 ntBASIC5.34□□□□□ -1.55
SLC44A3Q8N4M1 AC239868.4-201ENST00000608318 671 ntBASIC5.34□□□□□ -1.55
SLC44A3Q8N4M1 AC107075.1-201ENST00000613695 314 ntBASIC5.34□□□□□ -1.55
SLC44A3Q8N4M1 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC5.34□□□□□ -1.55
SLC44A3Q8N4M1 AL354821.1-201ENST00000617598 809 ntTSL 3 BASIC5.34□□□□□ -1.55
SLC44A3Q8N4M1 AL157770.1-201ENST00000623049 439 ntBASIC5.34□□□□□ -1.55
SLC44A3Q8N4M1 AP003072.4-201ENST00000624580 310 ntBASIC5.34□□□□□ -1.55
SLC44A3Q8N4M1 AP003400.3-201ENST00000624904 346 ntBASIC5.34□□□□□ -1.55
SLC44A3Q8N4M1 SATB1-AS1-259ENST00000629477 853 ntTSL 5 BASIC5.34□□□□□ -1.55
SLC44A3Q8N4M1 NEK3-211ENST00000629912 141 ntTSL 5 BASIC5.34□□□□□ -1.55
SLC44A3Q8N4M1 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC5.34□□□□□ -1.55
SLC44A3Q8N4M1 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC5.34□□□□□ -1.55
SLC44A3Q8N4M1 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC5.34□□□□□ -1.55
SLC44A3Q8N4M1 AC016745.2-201ENST00000608834 3443 ntBASIC5.34□□□□□ -1.55
SLC44A3Q8N4M1 CYP2C8-210ENST00000535898 1799 ntTSL 2 BASIC5.34□□□□□ -1.56
SLC44A3Q8N4M1 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC5.34□□□□□ -1.56
SLC44A3Q8N4M1 SLC35A5-206ENST00000492406 4399 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 105.6 ms