Protein–RNA interactions for Protein: Q8IVW4

CDKL3, Cyclin-dependent kinase-like 3, humanhuman

Predicted RBP Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL3Q8IVW4 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
CDKL3Q8IVW4 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
CDKL3Q8IVW4 AC009229.4-201ENST00000623854 1947 ntBASIC4.35□□□□□ -1.71
CDKL3Q8IVW4 DNAJC12-201ENST00000225171 1201 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
CDKL3Q8IVW4 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
CDKL3Q8IVW4 AC010132.2-201ENST00000295493 1043 ntBASIC4.35□□□□□ -1.71
CDKL3Q8IVW4 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC4.35□□□□□ -1.71
CDKL3Q8IVW4 MIR513A2-201ENST00000385249 127 ntBASIC4.35□□□□□ -1.71
CDKL3Q8IVW4 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC4.35□□□□□ -1.71
CDKL3Q8IVW4 Y_RNA.625-201ENST00000411256 107 ntBASIC4.35□□□□□ -1.71
CDKL3Q8IVW4 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC4.35□□□□□ -1.71
CDKL3Q8IVW4 AC009468.1-201ENST00000412800 437 ntTSL 3 BASIC4.35□□□□□ -1.71
CDKL3Q8IVW4 AC097717.1-233ENST00000413557 460 ntTSL 3 BASIC4.35□□□□□ -1.71
CDKL3Q8IVW4 TRIM60P17-201ENST00000415181 719 ntBASIC4.35□□□□□ -1.71
CDKL3Q8IVW4 AC087380.1-202ENST00000415970 1163 ntTSL 2 BASIC4.35□□□□□ -1.71
CDKL3Q8IVW4 DSCR4-IT1-201ENST00000417138 424 ntTSL 5 BASIC4.35□□□□□ -1.71
CDKL3Q8IVW4 MFSD13B-201ENST00000420133 1290 ntBASIC4.35□□□□□ -1.71
CDKL3Q8IVW4 MIR99AHG-205ENST00000435697 716 ntTSL 2 BASIC4.35□□□□□ -1.71
CDKL3Q8IVW4 AL121877.1-201ENST00000453704 622 ntBASIC4.35□□□□□ -1.71
CDKL3Q8IVW4 AC006517.1-201ENST00000480485 328 ntBASIC4.35□□□□□ -1.71
CDKL3Q8IVW4 AC093720.1-201ENST00000505681 714 ntBASIC4.35□□□□□ -1.71
CDKL3Q8IVW4 AC019133.1-201ENST00000508292 420 ntTSL 3 BASIC4.35□□□□□ -1.71
CDKL3Q8IVW4 RNA5SP73-201ENST00000516744 108 ntBASIC4.35□□□□□ -1.71
CDKL3Q8IVW4 TRAPPC2P2-201ENST00000517589 409 ntBASIC4.35□□□□□ -1.71
CDKL3Q8IVW4 AC104350.1-201ENST00000518750 877 ntTSL 3 BASIC4.35□□□□□ -1.71
CDKL3Q8IVW4 AC012613.1-201ENST00000522685 387 ntTSL 2 BASIC4.35□□□□□ -1.71
CDKL3Q8IVW4 OR8G5-201ENST00000524943 1041 ntBASIC4.35□□□□□ -1.71
CDKL3Q8IVW4 LONRF1-203ENST00000525024 841 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
CDKL3Q8IVW4 CASP1-206ENST00000526568 1061 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
CDKL3Q8IVW4 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
CDKL3Q8IVW4 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC4.35□□□□□ -1.71
CDKL3Q8IVW4 AC063950.1-201ENST00000552036 308 ntBASIC4.35□□□□□ -1.71
CDKL3Q8IVW4 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC4.35□□□□□ -1.71
CDKL3Q8IVW4 ETFRF1-202ENST00000553788 708 ntTSL 3 BASIC4.35□□□□□ -1.71
CDKL3Q8IVW4 MIR4715-201ENST00000584117 79 ntBASIC4.35□□□□□ -1.71
CDKL3Q8IVW4 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC4.35□□□□□ -1.71
CDKL3Q8IVW4 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC4.35□□□□□ -1.71
CDKL3Q8IVW4 AC104785.1-201ENST00000603220 588 ntBASIC4.35□□□□□ -1.71
CDKL3Q8IVW4 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC4.35□□□□□ -1.71
CDKL3Q8IVW4 OR8H1-202ENST00000610894 927 ntAPPRIS ALT1 BASIC4.35□□□□□ -1.71
CDKL3Q8IVW4 AC064801.1-201ENST00000612025 407 ntBASIC4.35□□□□□ -1.71
CDKL3Q8IVW4 AC007389.5-201ENST00000629214 744 ntTSL 5 BASIC4.35□□□□□ -1.71
CDKL3Q8IVW4 AC233968.1-201ENST00000611212 1300 ntBASIC4.35□□□□□ -1.71
CDKL3Q8IVW4 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
CDKL3Q8IVW4 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC4.35□□□□□ -1.71
CDKL3Q8IVW4 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC4.35□□□□□ -1.71
CDKL3Q8IVW4 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC4.35□□□□□ -1.71
CDKL3Q8IVW4 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC4.35□□□□□ -1.71
CDKL3Q8IVW4 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC4.35□□□□□ -1.71
CDKL3Q8IVW4 AL356489.2-201ENST00000566968 3528 ntBASIC4.35□□□□□ -1.71
CDKL3Q8IVW4 AC092162.3-201ENST00000624511 1624 ntBASIC4.35□□□□□ -1.71
CDKL3Q8IVW4 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC4.35□□□□□ -1.71
CDKL3Q8IVW4 MFSD8-216ENST00000641147 4009 ntBASIC4.35□□□□□ -1.71
CDKL3Q8IVW4 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
CDKL3Q8IVW4 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
CDKL3Q8IVW4 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
CDKL3Q8IVW4 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC4.34□□□□□ -1.71
CDKL3Q8IVW4 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
CDKL3Q8IVW4 MIR448-201ENST00000362131 111 ntBASIC4.34□□□□□ -1.71
CDKL3Q8IVW4 RHOT1P2-201ENST00000366423 333 ntBASIC4.34□□□□□ -1.71
CDKL3Q8IVW4 MIR192-201ENST00000384915 110 ntBASIC4.34□□□□□ -1.71
CDKL3Q8IVW4 RNA5SP105-201ENST00000391123 113 ntBASIC4.34□□□□□ -1.71
CDKL3Q8IVW4 RNA5SP36-201ENST00000410197 133 ntBASIC4.34□□□□□ -1.71
CDKL3Q8IVW4 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
CDKL3Q8IVW4 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
CDKL3Q8IVW4 ELOCP18-201ENST00000434209 337 ntBASIC4.34□□□□□ -1.71
CDKL3Q8IVW4 ATP6V0E1P2-201ENST00000441771 245 ntBASIC4.34□□□□□ -1.71
CDKL3Q8IVW4 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
CDKL3Q8IVW4 H2AFZP6-201ENST00000444403 394 ntBASIC4.34□□□□□ -1.71
CDKL3Q8IVW4 EEF1A1P1-201ENST00000447052 739 ntBASIC4.34□□□□□ -1.71
CDKL3Q8IVW4 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC4.34□□□□□ -1.71
CDKL3Q8IVW4 C2orf80-207ENST00000453017 722 ntTSL 3 BASIC4.34□□□□□ -1.71
CDKL3Q8IVW4 AC091976.1-201ENST00000458002 448 ntTSL 3 BASIC4.34□□□□□ -1.71
CDKL3Q8IVW4 PPIAP21-201ENST00000464473 501 ntBASIC4.34□□□□□ -1.71
CDKL3Q8IVW4 AC025445.1-201ENST00000502728 300 ntBASIC4.34□□□□□ -1.71
CDKL3Q8IVW4 AC124242.1-205ENST00000517798 646 ntTSL 5 BASIC4.34□□□□□ -1.71
CDKL3Q8IVW4 AC010476.1-201ENST00000519111 851 ntBASIC4.34□□□□□ -1.71
CDKL3Q8IVW4 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC4.34□□□□□ -1.71
CDKL3Q8IVW4 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC4.34□□□□□ -1.71
CDKL3Q8IVW4 AP001978.1-201ENST00000526851 834 ntTSL 2 BASIC4.34□□□□□ -1.71
CDKL3Q8IVW4 AP001528.2-201ENST00000528660 1156 ntTSL 5 BASIC4.34□□□□□ -1.71
CDKL3Q8IVW4 OR5AN2P-201ENST00000534535 896 ntBASIC4.34□□□□□ -1.71
CDKL3Q8IVW4 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC4.34□□□□□ -1.71
CDKL3Q8IVW4 AC073864.1-201ENST00000540161 562 ntTSL 4 BASIC4.34□□□□□ -1.71
CDKL3Q8IVW4 PSMG2-204ENST00000585331 983 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
CDKL3Q8IVW4 AL139286.1-201ENST00000604465 483 ntBASIC4.34□□□□□ -1.71
CDKL3Q8IVW4 OR6R2P-201ENST00000609216 300 ntBASIC4.34□□□□□ -1.71
CDKL3Q8IVW4 MIR6820-201ENST00000611508 62 ntBASIC4.34□□□□□ -1.71
CDKL3Q8IVW4 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
CDKL3Q8IVW4 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC4.34□□□□□ -1.71
CDKL3Q8IVW4 OR11H5P-202ENST00000641612 1325 ntBASIC4.34□□□□□ -1.71
CDKL3Q8IVW4 RMDN2-207ENST00000417700 1426 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
CDKL3Q8IVW4 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
CDKL3Q8IVW4 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC4.34□□□□□ -1.71
CDKL3Q8IVW4 USP9YP4-201ENST00000424401 1745 ntBASIC4.34□□□□□ -1.71
CDKL3Q8IVW4 CEP290-202ENST00000397838 2421 ntTSL 5 BASIC4.34□□□□□ -1.72
CDKL3Q8IVW4 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC4.34□□□□□ -1.72
CDKL3Q8IVW4 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
CDKL3Q8IVW4 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
CDKL3Q8IVW4 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC4.33□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 93.6 ms