Protein–RNA interactions for Protein: Q8IV32

CCDC71, Coiled-coil domain-containing protein 71, humanhuman

Predicted RBP Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71Q8IV32 APOC2-203ENST00000590360 744 ntAPPRIS P1 TSL 3 BASIC4.3□□□□□ -1.72
CCDC71Q8IV32 AC011503.1-202ENST00000598914 919 ntTSL 2 BASIC4.3□□□□□ -1.72
CCDC71Q8IV32 AL121932.1-201ENST00000605542 214 ntBASIC4.3□□□□□ -1.72
CCDC71Q8IV32 AC023509.5-201ENST00000617434 807 ntBASIC4.3□□□□□ -1.72
CCDC71Q8IV32 GXYLT1P5-202ENST00000618830 589 ntTSL 5 BASIC4.3□□□□□ -1.72
CCDC71Q8IV32 AP002371.2-201ENST00000624450 503 ntBASIC4.3□□□□□ -1.72
CCDC71Q8IV32 LDHA-225ENST00000625635 141 ntTSL 5 BASIC4.3□□□□□ -1.72
CCDC71Q8IV32 AL358975.1-202ENST00000628133 589 ntTSL 5 BASIC4.3□□□□□ -1.72
CCDC71Q8IV32 ZNF679-202ENST00000421025 1567 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
CCDC71Q8IV32 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
CCDC71Q8IV32 KARSP3-201ENST00000571212 1504 ntBASIC4.3□□□□□ -1.72
CCDC71Q8IV32 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
CCDC71Q8IV32 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
CCDC71Q8IV32 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
CCDC71Q8IV32 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
CCDC71Q8IV32 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC4.3□□□□□ -1.72
CCDC71Q8IV32 AC068254.2-201ENST00000623938 3577 ntBASIC4.29□□□□□ -1.72
CCDC71Q8IV32 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
CCDC71Q8IV32 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
CCDC71Q8IV32 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC4.29□□□□□ -1.72
CCDC71Q8IV32 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
CCDC71Q8IV32 AL031119.1-201ENST00000404707 1879 ntBASIC4.29□□□□□ -1.72
CCDC71Q8IV32 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
CCDC71Q8IV32 MGST1-201ENST00000010404 901 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
CCDC71Q8IV32 CREM-201ENST00000337656 900 ntAPPRIS ALT1 TSL 5 BASIC4.29□□□□□ -1.72
CCDC71Q8IV32 OR6C74-201ENST00000343870 1105 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
CCDC71Q8IV32 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
CCDC71Q8IV32 RNA5SP28-201ENST00000363841 119 ntBASIC4.29□□□□□ -1.72
CCDC71Q8IV32 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
CCDC71Q8IV32 AL590762.2-201ENST00000395798 571 ntBASIC4.29□□□□□ -1.72
CCDC71Q8IV32 MGST1-203ENST00000396207 909 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
CCDC71Q8IV32 RPL5P19-201ENST00000404228 893 ntBASIC4.29□□□□□ -1.72
CCDC71Q8IV32 AL356967.1-201ENST00000406305 431 ntBASIC4.29□□□□□ -1.72
CCDC71Q8IV32 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC4.29□□□□□ -1.72
CCDC71Q8IV32 LINC00993-201ENST00000420453 540 ntBASIC4.29□□□□□ -1.72
CCDC71Q8IV32 RPL21P43-201ENST00000425440 472 ntBASIC4.29□□□□□ -1.72
CCDC71Q8IV32 AL357832.1-201ENST00000427460 420 ntTSL 3 BASIC4.29□□□□□ -1.72
CCDC71Q8IV32 AC016831.4-201ENST00000438302 307 ntBASIC4.29□□□□□ -1.72
CCDC71Q8IV32 AL512380.1-202ENST00000447728 543 ntTSL 5 BASIC4.29□□□□□ -1.72
CCDC71Q8IV32 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
CCDC71Q8IV32 NDUFAF4P3-201ENST00000456468 525 ntBASIC4.29□□□□□ -1.72
CCDC71Q8IV32 RPS5P7-201ENST00000456664 608 ntBASIC4.29□□□□□ -1.72
CCDC71Q8IV32 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC4.29□□□□□ -1.72
CCDC71Q8IV32 OR52A4P-201ENST00000472867 958 ntBASIC4.29□□□□□ -1.72
CCDC71Q8IV32 CREM-230ENST00000474931 626 ntTSL 2 BASIC4.29□□□□□ -1.72
CCDC71Q8IV32 RN7SL41P-201ENST00000476144 297 ntBASIC4.29□□□□□ -1.72
CCDC71Q8IV32 CD200R1-205ENST00000490004 778 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
CCDC71Q8IV32 AC069439.2-201ENST00000496403 789 ntTSL 2 BASIC4.29□□□□□ -1.72
CCDC71Q8IV32 STPG2-AS1-201ENST00000508933 537 ntTSL 4 BASIC4.29□□□□□ -1.72
CCDC71Q8IV32 AC106806.2-201ENST00000509365 500 ntBASIC4.29□□□□□ -1.72
CCDC71Q8IV32 AC090833.1-202ENST00000511073 781 ntTSL 3 BASIC4.29□□□□□ -1.72
CCDC71Q8IV32 C8orf22-203ENST00000517663 788 ntAPPRIS ALT1 TSL 5 BASIC4.29□□□□□ -1.72
CCDC71Q8IV32 AC068413.1-201ENST00000517739 776 ntTSL 5 BASIC4.29□□□□□ -1.72
CCDC71Q8IV32 AC012103.1-201ENST00000522281 780 ntTSL 3 BASIC4.29□□□□□ -1.72
CCDC71Q8IV32 AC100770.1-201ENST00000532310 322 ntBASIC4.29□□□□□ -1.72
CCDC71Q8IV32 AL118556.1-201ENST00000555257 502 ntTSL 2 BASIC4.29□□□□□ -1.72
CCDC71Q8IV32 AL133485.1-201ENST00000555966 392 ntTSL 2 BASIC4.29□□□□□ -1.72
CCDC71Q8IV32 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC4.29□□□□□ -1.72
CCDC71Q8IV32 PARP1P2-201ENST00000556806 195 ntBASIC4.29□□□□□ -1.72
CCDC71Q8IV32 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC4.29□□□□□ -1.72
CCDC71Q8IV32 PWRN3-201ENST00000566797 849 ntTSL 5 BASIC4.29□□□□□ -1.72
CCDC71Q8IV32 AC027455.1-201ENST00000574104 594 ntBASIC4.29□□□□□ -1.72
CCDC71Q8IV32 AC090079.2-201ENST00000575289 768 ntBASIC4.29□□□□□ -1.72
CCDC71Q8IV32 AC005154.1-213ENST00000578572 445 ntTSL 3 BASIC4.29□□□□□ -1.72
CCDC71Q8IV32 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
CCDC71Q8IV32 RN7SL690P-201ENST00000582087 240 ntBASIC4.29□□□□□ -1.72
CCDC71Q8IV32 AC022726.1-201ENST00000587475 207 ntBASIC4.29□□□□□ -1.72
CCDC71Q8IV32 AP001172.1-201ENST00000602921 581 ntTSL 3 BASIC4.29□□□□□ -1.72
CCDC71Q8IV32 IGKV1OR2-9-201ENST00000603957 287 ntBASIC4.29□□□□□ -1.72
CCDC71Q8IV32 IGKV1OR2-11-201ENST00000604120 287 ntBASIC4.29□□□□□ -1.72
CCDC71Q8IV32 AL445423.1-201ENST00000609941 536 ntBASIC4.29□□□□□ -1.72
CCDC71Q8IV32 AP006248.3-201ENST00000623580 594 ntBASIC4.29□□□□□ -1.72
CCDC71Q8IV32 AC067931.1-201ENST00000624190 671 ntBASIC4.29□□□□□ -1.72
CCDC71Q8IV32 AP002967.1-201ENST00000624203 539 ntBASIC4.29□□□□□ -1.72
CCDC71Q8IV32 AC080188.3-201ENST00000624842 748 ntBASIC4.29□□□□□ -1.72
CCDC71Q8IV32 CR381572.2-201ENST00000624852 397 ntBASIC4.29□□□□□ -1.72
CCDC71Q8IV32 BMS1P21-201ENST00000634565 365 ntBASIC4.29□□□□□ -1.72
CCDC71Q8IV32 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
CCDC71Q8IV32 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
CCDC71Q8IV32 PMCHL2-201ENST00000415808 1841 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
CCDC71Q8IV32 AC139713.2-214ENST00000642059 1811 ntBASIC4.29□□□□□ -1.72
CCDC71Q8IV32 STAP1-201ENST00000265404 1511 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
CCDC71Q8IV32 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC4.29□□□□□ -1.72
CCDC71Q8IV32 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
CCDC71Q8IV32 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC4.29□□□□□ -1.72
CCDC71Q8IV32 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC4.29□□□□□ -1.72
CCDC71Q8IV32 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
CCDC71Q8IV32 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC4.29□□□□□ -1.72
CCDC71Q8IV32 AC089984.1-201ENST00000552780 1431 ntTSL 3 BASIC4.29□□□□□ -1.72
CCDC71Q8IV32 DHX40P1-201ENST00000588725 1412 ntBASIC4.29□□□□□ -1.72
CCDC71Q8IV32 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC4.28□□□□□ -1.72
CCDC71Q8IV32 AL355852.1-201ENST00000454081 1771 ntBASIC4.28□□□□□ -1.72
CCDC71Q8IV32 OR4K15-201ENST00000305051 1216 ntBASIC4.28□□□□□ -1.72
CCDC71Q8IV32 FAM3C2-201ENST00000312214 681 ntBASIC4.28□□□□□ -1.72
CCDC71Q8IV32 DSCR8-201ENST00000357704 552 ntAPPRIS P5 TSL 2 BASIC4.28□□□□□ -1.72
CCDC71Q8IV32 AC068538.1-201ENST00000376856 336 ntBASIC4.28□□□□□ -1.72
CCDC71Q8IV32 SIRPD-201ENST00000381621 823 ntAPPRIS ALT2 TSL 3 BASIC4.28□□□□□ -1.72
CCDC71Q8IV32 DSCR8-202ENST00000400477 534 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
CCDC71Q8IV32 AL049697.2-201ENST00000403708 294 ntBASIC4.28□□□□□ -1.72
CCDC71Q8IV32 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC4.28□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 86.3 ms