Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 AC068722.2-201ENST00000618734 544 ntBASIC6.59□□□□□ -1.35
NPAS4Q8IUM7 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC6.59□□□□□ -1.35
NPAS4Q8IUM7 AC092794.2-201ENST00000620933 563 ntBASIC6.59□□□□□ -1.35
NPAS4Q8IUM7 AC012254.5-201ENST00000623573 478 ntBASIC6.59□□□□□ -1.35
NPAS4Q8IUM7 AC104024.1-201ENST00000428142 2201 ntTSL 2 BASIC6.59□□□□□ -1.35
NPAS4Q8IUM7 ZNF562-202ENST00000453372 2111 ntAPPRIS P3 TSL 3 BASIC6.59□□□□□ -1.35
NPAS4Q8IUM7 SPIRE1-206ENST00000453447 2107 ntTSL 5 BASIC6.59□□□□□ -1.35
NPAS4Q8IUM7 LINC02097-201ENST00000419257 2063 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
NPAS4Q8IUM7 ZNF19-206ENST00000565100 2087 ntTSL 5 BASIC6.59□□□□□ -1.35
NPAS4Q8IUM7 ASTN2-AS1-201ENST00000418250 1756 ntTSL 2 BASIC6.59□□□□□ -1.35
NPAS4Q8IUM7 CREM-217ENST00000439705 2306 ntTSL 5 BASIC6.59□□□□□ -1.36
NPAS4Q8IUM7 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC6.59□□□□□ -1.36
NPAS4Q8IUM7 TRAF5-201ENST00000261464 3972 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.36
NPAS4Q8IUM7 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC6.58□□□□□ -1.36
NPAS4Q8IUM7 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
NPAS4Q8IUM7 ZBTB25-204ENST00000608382 10372 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
NPAS4Q8IUM7 AC007359.1-202ENST00000419158 2939 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
NPAS4Q8IUM7 AC008175.1-201ENST00000446299 2939 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
NPAS4Q8IUM7 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC6.58□□□□□ -1.36
NPAS4Q8IUM7 LUZP1-203ENST00000418342 8421 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
NPAS4Q8IUM7 MAK-202ENST00000354489 3941 ntTSL 5 BASIC6.58□□□□□ -1.36
NPAS4Q8IUM7 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC6.58□□□□□ -1.36
NPAS4Q8IUM7 AC079753.1-201ENST00000623243 3868 ntBASIC6.58□□□□□ -1.36
NPAS4Q8IUM7 POLR2B-202ENST00000381227 4108 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
NPAS4Q8IUM7 AL445437.1-201ENST00000623157 3087 ntBASIC6.58□□□□□ -1.36
NPAS4Q8IUM7 TAS2R16-201ENST00000249284 997 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
NPAS4Q8IUM7 SSX5-202ENST00000347757 1261 ntAPPRIS ALT2 TSL 5 BASIC6.58□□□□□ -1.36
NPAS4Q8IUM7 PRSS37-201ENST00000350549 1189 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
NPAS4Q8IUM7 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC6.58□□□□□ -1.36
NPAS4Q8IUM7 SSX5-203ENST00000376923 1208 ntAPPRIS ALT2 TSL 5 BASIC6.58□□□□□ -1.36
NPAS4Q8IUM7 Y_RNA.582-201ENST00000391023 95 ntBASIC6.58□□□□□ -1.36
NPAS4Q8IUM7 OR7E101P-201ENST00000400428 513 ntBASIC6.58□□□□□ -1.36
NPAS4Q8IUM7 BTF3P7-201ENST00000407097 488 ntBASIC6.58□□□□□ -1.36
NPAS4Q8IUM7 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC6.58□□□□□ -1.36
NPAS4Q8IUM7 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC6.58□□□□□ -1.36
NPAS4Q8IUM7 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC6.58□□□□□ -1.36
NPAS4Q8IUM7 CYP4F30P-202ENST00000420048 405 ntBASIC6.58□□□□□ -1.36
NPAS4Q8IUM7 RPL7P30-201ENST00000420888 709 ntBASIC6.58□□□□□ -1.36
NPAS4Q8IUM7 RPS15AP30-201ENST00000420976 390 ntBASIC6.58□□□□□ -1.36
NPAS4Q8IUM7 HNRNPA1P29-201ENST00000426409 879 ntBASIC6.58□□□□□ -1.36
NPAS4Q8IUM7 AL669831.5-205ENST00000429505 441 ntTSL 3 BASIC6.58□□□□□ -1.36
NPAS4Q8IUM7 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC6.58□□□□□ -1.36
NPAS4Q8IUM7 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC6.58□□□□□ -1.36
NPAS4Q8IUM7 LYPLA1P1-201ENST00000434514 622 ntBASIC6.58□□□□□ -1.36
NPAS4Q8IUM7 GAPDHP48-201ENST00000436626 961 ntBASIC6.58□□□□□ -1.36
NPAS4Q8IUM7 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC6.58□□□□□ -1.36
NPAS4Q8IUM7 AP000281.1-201ENST00000444036 316 ntBASIC6.58□□□□□ -1.36
NPAS4Q8IUM7 FDX1P2-201ENST00000450769 375 ntBASIC6.58□□□□□ -1.36
NPAS4Q8IUM7 AC016027.4-201ENST00000450866 277 ntBASIC6.58□□□□□ -1.36
NPAS4Q8IUM7 TRBV26-201ENST00000456572 344 ntBASIC6.58□□□□□ -1.36
NPAS4Q8IUM7 AC026410.2-201ENST00000460281 156 ntBASIC6.58□□□□□ -1.36
NPAS4Q8IUM7 RN7SL269P-201ENST00000467795 305 ntBASIC6.58□□□□□ -1.36
NPAS4Q8IUM7 OARD1-207ENST00000468811 819 ntAPPRIS P1 TSL 2 BASIC6.58□□□□□ -1.36
NPAS4Q8IUM7 LARP1BP2-201ENST00000486594 519 ntBASIC6.58□□□□□ -1.36
NPAS4Q8IUM7 AC114728.1-201ENST00000488289 483 ntBASIC6.58□□□□□ -1.36
NPAS4Q8IUM7 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC6.58□□□□□ -1.36
NPAS4Q8IUM7 AF131216.2-201ENST00000512316 564 ntBASIC6.58□□□□□ -1.36
NPAS4Q8IUM7 AC011389.1-203ENST00000513790 573 ntTSL 4 BASIC6.58□□□□□ -1.36
NPAS4Q8IUM7 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC6.58□□□□□ -1.36
NPAS4Q8IUM7 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC6.58□□□□□ -1.36
NPAS4Q8IUM7 AC079209.1-202ENST00000521953 522 ntTSL 3 BASIC6.58□□□□□ -1.36
NPAS4Q8IUM7 LINC01033-204ENST00000523194 715 ntTSL 2 BASIC6.58□□□□□ -1.36
NPAS4Q8IUM7 IGHV1-14-201ENST00000523391 241 ntBASIC6.58□□□□□ -1.36
NPAS4Q8IUM7 AC118273.2-201ENST00000532092 465 ntBASIC6.58□□□□□ -1.36
NPAS4Q8IUM7 AC013828.2-201ENST00000532487 235 ntBASIC6.58□□□□□ -1.36
NPAS4Q8IUM7 AL163195.3-202ENST00000555283 578 ntAPPRIS P1 TSL 4 BASIC6.58□□□□□ -1.36
NPAS4Q8IUM7 CFL2-206ENST00000556161 546 ntTSL 4 BASIC6.58□□□□□ -1.36
NPAS4Q8IUM7 PSMA3-213ENST00000557508 814 ntTSL 5 BASIC6.58□□□□□ -1.36
NPAS4Q8IUM7 AC103876.1-202ENST00000561498 369 ntTSL 3 BASIC6.58□□□□□ -1.36
NPAS4Q8IUM7 AC007225.2-201ENST00000562529 256 ntBASIC6.58□□□□□ -1.36
NPAS4Q8IUM7 LINC01533-201ENST00000585739 616 ntTSL 5 BASIC6.58□□□□□ -1.36
NPAS4Q8IUM7 SSX4B-201ENST00000595235 1221 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
NPAS4Q8IUM7 SSX4-201ENST00000595689 1221 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
NPAS4Q8IUM7 AC116447.1-201ENST00000613153 453 ntBASIC6.58□□□□□ -1.36
NPAS4Q8IUM7 AL137067.2-201ENST00000621202 131 ntBASIC6.58□□□□□ -1.36
NPAS4Q8IUM7 CGA-206ENST00000630630 832 ntTSL 2 BASIC6.58□□□□□ -1.36
NPAS4Q8IUM7 CRYM-AS1-204ENST00000637983 556 ntBASIC6.58□□□□□ -1.36
NPAS4Q8IUM7 AC116667.2-201ENST00000641075 823 ntBASIC6.58□□□□□ -1.36
NPAS4Q8IUM7 PYROXD1-201ENST00000240651 4055 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
NPAS4Q8IUM7 NR5A2-203ENST00000367362 5086 ntAPPRIS P3 TSL 1 (best) BASIC6.58□□□□□ -1.36
NPAS4Q8IUM7 ZC3H14-215ENST00000555900 1762 ntTSL 5 BASIC6.58□□□□□ -1.36
NPAS4Q8IUM7 ANKRD49-208ENST00000544253 3002 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
NPAS4Q8IUM7 AP005212.5-201ENST00000577614 3505 ntTSL 5 BASIC6.58□□□□□ -1.36
NPAS4Q8IUM7 AC098679.1-203ENST00000505532 2227 ntTSL 2 BASIC6.58□□□□□ -1.36
NPAS4Q8IUM7 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
NPAS4Q8IUM7 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
NPAS4Q8IUM7 ZNF793-202ENST00000542455 4073 ntTSL 5 BASIC6.58□□□□□ -1.36
NPAS4Q8IUM7 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
NPAS4Q8IUM7 CYP19A1-202ENST00000396404 2388 ntAPPRIS P1 TSL 2 BASIC6.58□□□□□ -1.36
NPAS4Q8IUM7 BRCA1-210ENST00000471181 5936 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
NPAS4Q8IUM7 UGT3A1-207ENST00000625798 3097 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
NPAS4Q8IUM7 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
NPAS4Q8IUM7 RAP1GDS1-202ENST00000339360 2092 ntAPPRIS ALT1 TSL 1 (best) BASIC6.57□□□□□ -1.36
NPAS4Q8IUM7 GTF2IP4-201ENST00000453092 2054 ntBASIC6.57□□□□□ -1.36
NPAS4Q8IUM7 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
NPAS4Q8IUM7 EEF1A1P24-201ENST00000451469 1378 ntBASIC6.57□□□□□ -1.36
NPAS4Q8IUM7 IQCG-201ENST00000265239 2262 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
NPAS4Q8IUM7 C11orf65-208ENST00000615746 2711 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
NPAS4Q8IUM7 SPEF2-202ENST00000356031 5681 ntAPPRIS P2 TSL 1 (best) BASIC6.57□□□□□ -1.36
NPAS4Q8IUM7 ESRRG-212ENST00000463665 3359 ntTSL 2 BASIC6.57□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 78.1 ms