Protein–RNA interactions for Protein: Q8HWS3

RFX6, DNA-binding protein RFX6, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX6Q8HWS3 AC026422.1-201ENST00000623961 452 ntBASIC5.09□□□□□ -1.59
RFX6Q8HWS3 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC5.09□□□□□ -1.59
RFX6Q8HWS3 AC119674.1-212ENST00000641155 993 ntBASIC5.09□□□□□ -1.59
RFX6Q8HWS3 OR6C3-203ENST00000641740 1093 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
RFX6Q8HWS3 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
RFX6Q8HWS3 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
RFX6Q8HWS3 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC5.09□□□□□ -1.59
RFX6Q8HWS3 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC5.09□□□□□ -1.6
RFX6Q8HWS3 LINC00507-201ENST00000540882 1935 ntTSL 5 BASIC5.09□□□□□ -1.6
RFX6Q8HWS3 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
RFX6Q8HWS3 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.6
RFX6Q8HWS3 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
RFX6Q8HWS3 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC5.09□□□□□ -1.6
RFX6Q8HWS3 EED-203ENST00000351625 1696 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
RFX6Q8HWS3 UGT2B26P-201ENST00000508672 1613 ntBASIC5.08□□□□□ -1.6
RFX6Q8HWS3 EFCAB3-201ENST00000305286 1542 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
RFX6Q8HWS3 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
RFX6Q8HWS3 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
RFX6Q8HWS3 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
RFX6Q8HWS3 LINC02070-201ENST00000460586 1321 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
RFX6Q8HWS3 METTL21EP-201ENST00000298105 713 ntBASIC5.08□□□□□ -1.6
RFX6Q8HWS3 R3HCC1L-204ENST00000370586 941 ntTSL 3 BASIC5.08□□□□□ -1.6
RFX6Q8HWS3 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC5.08□□□□□ -1.6
RFX6Q8HWS3 Y_RNA.472-201ENST00000384322 102 ntBASIC5.08□□□□□ -1.6
RFX6Q8HWS3 MTCO1P56-201ENST00000401674 224 ntBASIC5.08□□□□□ -1.6
RFX6Q8HWS3 RN7SKP278-201ENST00000410504 342 ntBASIC5.08□□□□□ -1.6
RFX6Q8HWS3 GJA6P-201ENST00000415117 1042 ntBASIC5.08□□□□□ -1.6
RFX6Q8HWS3 TBCAP2-201ENST00000416175 326 ntBASIC5.08□□□□□ -1.6
RFX6Q8HWS3 TMBIM7P-201ENST00000418074 855 ntBASIC5.08□□□□□ -1.6
RFX6Q8HWS3 SLC9B1P4-201ENST00000421957 1288 ntBASIC5.08□□□□□ -1.6
RFX6Q8HWS3 RGS17P1-201ENST00000423358 553 ntBASIC5.08□□□□□ -1.6
RFX6Q8HWS3 GTF2IP2-201ENST00000424290 697 ntBASIC5.08□□□□□ -1.6
RFX6Q8HWS3 AC092159.1-201ENST00000433724 493 ntTSL 2 BASIC5.08□□□□□ -1.6
RFX6Q8HWS3 AL162726.1-201ENST00000436084 455 ntTSL 3 BASIC5.08□□□□□ -1.6
RFX6Q8HWS3 CLEC5A-202ENST00000438351 743 ntTSL 3 BASIC5.08□□□□□ -1.6
RFX6Q8HWS3 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC5.08□□□□□ -1.6
RFX6Q8HWS3 AC018467.1-203ENST00000440785 506 ntTSL 3 BASIC5.08□□□□□ -1.6
RFX6Q8HWS3 LINC01789-201ENST00000443123 860 ntTSL 5 BASIC5.08□□□□□ -1.6
RFX6Q8HWS3 AC007179.2-204ENST00000444001 765 ntTSL 3 BASIC5.08□□□□□ -1.6
RFX6Q8HWS3 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC5.08□□□□□ -1.6
RFX6Q8HWS3 ITGA9-AS1-207ENST00000445429 532 ntTSL 5 BASIC5.08□□□□□ -1.6
RFX6Q8HWS3 CASP3P1-201ENST00000446037 609 ntBASIC5.08□□□□□ -1.6
RFX6Q8HWS3 AL035551.1-201ENST00000446931 348 ntBASIC5.08□□□□□ -1.6
RFX6Q8HWS3 RPL7L1P1-201ENST00000448259 785 ntBASIC5.08□□□□□ -1.6
RFX6Q8HWS3 AC243772.1-201ENST00000451620 410 ntBASIC5.08□□□□□ -1.6
RFX6Q8HWS3 EIF4A2P4-201ENST00000458691 1196 ntBASIC5.08□□□□□ -1.6
RFX6Q8HWS3 AC005410.1-202ENST00000460347 485 ntBASIC5.08□□□□□ -1.6
RFX6Q8HWS3 RPS4XP12-201ENST00000461747 709 ntBASIC5.08□□□□□ -1.6
RFX6Q8HWS3 RPS26P39-201ENST00000469206 341 ntBASIC5.08□□□□□ -1.6
RFX6Q8HWS3 ALG13-211ENST00000473389 693 ntTSL 2 BASIC5.08□□□□□ -1.6
RFX6Q8HWS3 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC5.08□□□□□ -1.6
RFX6Q8HWS3 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
RFX6Q8HWS3 RN7SL809P-201ENST00000482040 297 ntBASIC5.08□□□□□ -1.6
RFX6Q8HWS3 AC004815.1-201ENST00000484185 331 ntBASIC5.08□□□□□ -1.6
RFX6Q8HWS3 LINC02215-201ENST00000503320 543 ntTSL 4 BASIC5.08□□□□□ -1.6
RFX6Q8HWS3 PGRMC2-203ENST00000503588 818 ntTSL 4 BASIC5.08□□□□□ -1.6
RFX6Q8HWS3 RNA5SP228-201ENST00000516232 133 ntBASIC5.08□□□□□ -1.6
RFX6Q8HWS3 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC5.08□□□□□ -1.6
RFX6Q8HWS3 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC5.08□□□□□ -1.6
RFX6Q8HWS3 AL133330.2-201ENST00000532760 776 ntTSL 2 BASIC5.08□□□□□ -1.6
RFX6Q8HWS3 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC5.08□□□□□ -1.6
RFX6Q8HWS3 LINC02366-202ENST00000541949 696 ntTSL 3 BASIC5.08□□□□□ -1.6
RFX6Q8HWS3 AC135279.1-201ENST00000543493 504 ntBASIC5.08□□□□□ -1.6
RFX6Q8HWS3 TEX49-202ENST00000548380 573 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
RFX6Q8HWS3 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC5.08□□□□□ -1.6
RFX6Q8HWS3 AC099518.4-204ENST00000567047 380 ntTSL 2 BASIC5.08□□□□□ -1.6
RFX6Q8HWS3 RN7SL435P-201ENST00000584418 282 ntBASIC5.08□□□□□ -1.6
RFX6Q8HWS3 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC5.08□□□□□ -1.6
RFX6Q8HWS3 AC010320.2-203ENST00000601745 574 ntTSL 4 BASIC5.08□□□□□ -1.6
RFX6Q8HWS3 AC013468.1-201ENST00000608680 598 ntBASIC5.08□□□□□ -1.6
RFX6Q8HWS3 AC093799.2-201ENST00000610062 578 ntBASIC5.08□□□□□ -1.6
RFX6Q8HWS3 AL138478.1-201ENST00000612252 832 ntBASIC5.08□□□□□ -1.6
RFX6Q8HWS3 AL139407.1-201ENST00000613826 1175 ntBASIC5.08□□□□□ -1.6
RFX6Q8HWS3 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC5.08□□□□□ -1.6
RFX6Q8HWS3 MIR6729-201ENST00000618194 65 ntBASIC5.08□□□□□ -1.6
RFX6Q8HWS3 AC078883.4-201ENST00000623218 367 ntBASIC5.08□□□□□ -1.6
RFX6Q8HWS3 AC021106.3-201ENST00000623925 531 ntBASIC5.08□□□□□ -1.6
RFX6Q8HWS3 AC244517.5-203ENST00000624778 517 ntTSL 2 BASIC5.08□□□□□ -1.6
RFX6Q8HWS3 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
RFX6Q8HWS3 SUPT3H-203ENST00000371460 2389 ntAPPRIS P4 TSL 1 (best) BASIC5.08□□□□□ -1.6
RFX6Q8HWS3 LYST-202ENST00000389794 12985 ntTSL 5 BASIC5.08□□□□□ -1.6
RFX6Q8HWS3 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC5.08□□□□□ -1.6
RFX6Q8HWS3 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC5.08□□□□□ -1.6
RFX6Q8HWS3 LMNTD1-207ENST00000539744 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
RFX6Q8HWS3 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
RFX6Q8HWS3 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
RFX6Q8HWS3 AL590763.1-201ENST00000398297 1545 ntBASIC5.07□□□□□ -1.6
RFX6Q8HWS3 AC007996.1-201ENST00000620414 2821 ntBASIC5.07□□□□□ -1.6
RFX6Q8HWS3 AC004852.2-204ENST00000614137 1370 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
RFX6Q8HWS3 AC008758.3-201ENST00000507003 1829 ntBASIC5.07□□□□□ -1.6
RFX6Q8HWS3 ODAM-201ENST00000396094 1319 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
RFX6Q8HWS3 RNU4-92P-201ENST00000363783 136 ntBASIC5.07□□□□□ -1.6
RFX6Q8HWS3 RNU1-106P-201ENST00000384382 164 ntBASIC5.07□□□□□ -1.6
RFX6Q8HWS3 RNU6-452P-201ENST00000384406 107 ntBASIC5.07□□□□□ -1.6
RFX6Q8HWS3 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
RFX6Q8HWS3 RNU6-1242P-201ENST00000391052 103 ntBASIC5.07□□□□□ -1.6
RFX6Q8HWS3 AL138749.1-201ENST00000397864 791 ntTSL 5 BASIC5.07□□□□□ -1.6
RFX6Q8HWS3 PIGP-204ENST00000399102 688 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
RFX6Q8HWS3 FCF1P5-201ENST00000406490 482 ntBASIC5.07□□□□□ -1.6
RFX6Q8HWS3 PPP3R1-203ENST00000409752 851 ntTSL 3 BASIC5.07□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 120.8 ms