Protein–RNA interactions for Protein: Q7Z6J8

UBE3D, E3 ubiquitin-protein ligase E3D, humanhuman

Predictions only

Length 389 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3DQ7Z6J8 RNU1-49P-201ENST00000363468 159 ntBASIC5.94□□□□□ -1.46
UBE3DQ7Z6J8 RNA5SP346-201ENST00000363541 121 ntBASIC5.94□□□□□ -1.46
UBE3DQ7Z6J8 Y_RNA.166-201ENST00000363730 102 ntBASIC5.94□□□□□ -1.46
UBE3DQ7Z6J8 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
UBE3DQ7Z6J8 PSMA6P1-201ENST00000400275 741 ntBASIC5.94□□□□□ -1.46
UBE3DQ7Z6J8 MIR320C1-201ENST00000408566 88 ntBASIC5.94□□□□□ -1.46
UBE3DQ7Z6J8 RNU2-8P-201ENST00000410727 190 ntBASIC5.94□□□□□ -1.46
UBE3DQ7Z6J8 AC104777.1-202ENST00000413247 774 ntTSL 5 BASIC5.94□□□□□ -1.46
UBE3DQ7Z6J8 LINC01811-201ENST00000415991 594 ntTSL 5 BASIC5.94□□□□□ -1.46
UBE3DQ7Z6J8 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC5.94□□□□□ -1.46
UBE3DQ7Z6J8 AL049712.1-201ENST00000418739 872 ntTSL 3 BASIC5.94□□□□□ -1.46
UBE3DQ7Z6J8 AC007562.1-201ENST00000421819 517 ntBASIC5.94□□□□□ -1.46
UBE3DQ7Z6J8 RPS27AP6-201ENST00000427962 448 ntBASIC5.94□□□□□ -1.46
UBE3DQ7Z6J8 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC5.94□□□□□ -1.46
UBE3DQ7Z6J8 AC137630.2-202ENST00000429681 555 ntTSL 3 BASIC5.94□□□□□ -1.46
UBE3DQ7Z6J8 KCTD9P3-201ENST00000434597 1169 ntBASIC5.94□□□□□ -1.46
UBE3DQ7Z6J8 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC5.94□□□□□ -1.46
UBE3DQ7Z6J8 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC5.94□□□□□ -1.46
UBE3DQ7Z6J8 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC5.94□□□□□ -1.46
UBE3DQ7Z6J8 AL139120.1-201ENST00000443652 358 ntTSL 3 BASIC5.94□□□□□ -1.46
UBE3DQ7Z6J8 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC5.94□□□□□ -1.46
UBE3DQ7Z6J8 AC023274.2-201ENST00000445264 521 ntBASIC5.94□□□□□ -1.46
UBE3DQ7Z6J8 AC132479.1-201ENST00000449160 144 ntBASIC5.94□□□□□ -1.46
UBE3DQ7Z6J8 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC5.94□□□□□ -1.46
UBE3DQ7Z6J8 AL035454.1-201ENST00000470758 433 ntTSL 3 BASIC5.94□□□□□ -1.46
UBE3DQ7Z6J8 AC084211.1-201ENST00000473893 328 ntTSL 2 BASIC5.94□□□□□ -1.46
UBE3DQ7Z6J8 AC017015.1-201ENST00000477387 286 ntBASIC5.94□□□□□ -1.46
UBE3DQ7Z6J8 RPL17P2-201ENST00000491913 451 ntBASIC5.94□□□□□ -1.46
UBE3DQ7Z6J8 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC5.94□□□□□ -1.46
UBE3DQ7Z6J8 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC5.94□□□□□ -1.46
UBE3DQ7Z6J8 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC5.94□□□□□ -1.46
UBE3DQ7Z6J8 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC5.94□□□□□ -1.46
UBE3DQ7Z6J8 RNU6-150P-201ENST00000516237 95 ntBASIC5.94□□□□□ -1.46
UBE3DQ7Z6J8 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC5.94□□□□□ -1.46
UBE3DQ7Z6J8 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
UBE3DQ7Z6J8 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC5.94□□□□□ -1.46
UBE3DQ7Z6J8 MT1CP-201ENST00000567054 174 ntBASIC5.94□□□□□ -1.46
UBE3DQ7Z6J8 AC034268.2-201ENST00000571784 482 ntBASIC5.94□□□□□ -1.46
UBE3DQ7Z6J8 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC5.94□□□□□ -1.46
UBE3DQ7Z6J8 AP005121.1-201ENST00000578243 469 ntTSL 3 BASIC5.94□□□□□ -1.46
UBE3DQ7Z6J8 AC004160.1-202ENST00000599917 578 ntTSL 5 BASIC5.94□□□□□ -1.46
UBE3DQ7Z6J8 AC020910.2-201ENST00000603635 610 ntBASIC5.94□□□□□ -1.46
UBE3DQ7Z6J8 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC5.94□□□□□ -1.46
UBE3DQ7Z6J8 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC5.94□□□□□ -1.46
UBE3DQ7Z6J8 MIR6811-201ENST00000620409 58 ntBASIC5.94□□□□□ -1.46
UBE3DQ7Z6J8 AC091905.1-201ENST00000624400 311 ntBASIC5.94□□□□□ -1.46
UBE3DQ7Z6J8 AC072062.1-209ENST00000627336 772 ntTSL 5 BASIC5.94□□□□□ -1.46
UBE3DQ7Z6J8 VEZF1-204ENST00000584396 2342 ntAPPRIS ALT2 TSL 5 BASIC5.94□□□□□ -1.46
UBE3DQ7Z6J8 CASC15-201ENST00000444265 1497 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
UBE3DQ7Z6J8 STAG2-202ENST00000371144 4281 ntAPPRIS P3 TSL 1 (best) BASIC5.94□□□□□ -1.46
UBE3DQ7Z6J8 AC005261.2-201ENST00000593427 4258 ntBASIC5.94□□□□□ -1.46
UBE3DQ7Z6J8 NBPF12-205ENST00000617614 4630 ntTSL 5 BASIC5.94□□□□□ -1.46
UBE3DQ7Z6J8 AL161901.1-201ENST00000624954 3425 ntBASIC5.94□□□□□ -1.46
UBE3DQ7Z6J8 CTBS-202ENST00000370630 6600 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
UBE3DQ7Z6J8 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC5.94□□□□□ -1.46
UBE3DQ7Z6J8 OSBPL6-207ENST00000409631 3273 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
UBE3DQ7Z6J8 AL033543.1-201ENST00000623440 13454 ntBASIC5.94□□□□□ -1.46
UBE3DQ7Z6J8 GALNT5-201ENST00000259056 6171 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
UBE3DQ7Z6J8 TRPC4-204ENST00000379673 2760 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
UBE3DQ7Z6J8 MAPK10-341ENST00000641657 3860 ntAPPRIS P2 BASIC5.94□□□□□ -1.46
UBE3DQ7Z6J8 UGT2B11-201ENST00000446444 2088 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
UBE3DQ7Z6J8 AL583808.2-201ENST00000418078 1382 ntTSL 5 BASIC5.93□□□□□ -1.46
UBE3DQ7Z6J8 SCARB2-207ENST00000638295 4507 ntTSL 5 BASIC5.93□□□□□ -1.46
UBE3DQ7Z6J8 RSU1P2-203ENST00000448600 1582 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
UBE3DQ7Z6J8 AKAP17BP-201ENST00000431706 2719 ntBASIC5.93□□□□□ -1.46
UBE3DQ7Z6J8 LINC02008-201ENST00000470263 1951 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
UBE3DQ7Z6J8 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC5.93□□□□□ -1.46
UBE3DQ7Z6J8 CTAGE5-201ENST00000280082 2554 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
UBE3DQ7Z6J8 GTSF1-209ENST00000552397 1621 ntAPPRIS P1 TSL 2 BASIC5.93□□□□□ -1.46
UBE3DQ7Z6J8 IQCH-214ENST00000629425 1822 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
UBE3DQ7Z6J8 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC5.93□□□□□ -1.46
UBE3DQ7Z6J8 RNY3P3-201ENST00000363816 102 ntBASIC5.93□□□□□ -1.46
UBE3DQ7Z6J8 SNORA51.2-201ENST00000364595 132 ntBASIC5.93□□□□□ -1.46
UBE3DQ7Z6J8 SPRR2B-201ENST00000368755 617 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
UBE3DQ7Z6J8 TINAG-203ENST00000370869 782 ntTSL 3 BASIC5.93□□□□□ -1.46
UBE3DQ7Z6J8 LYZL1-201ENST00000375500 815 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
UBE3DQ7Z6J8 RNU6-767P-201ENST00000384132 107 ntBASIC5.93□□□□□ -1.46
UBE3DQ7Z6J8 RNU6-908P-201ENST00000410160 94 ntBASIC5.93□□□□□ -1.46
UBE3DQ7Z6J8 AL354751.2-201ENST00000415471 210 ntBASIC5.93□□□□□ -1.46
UBE3DQ7Z6J8 LINC01820-201ENST00000418415 570 ntTSL 2 BASIC5.93□□□□□ -1.46
UBE3DQ7Z6J8 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC5.93□□□□□ -1.46
UBE3DQ7Z6J8 AC233981.1-201ENST00000423224 461 ntBASIC5.93□□□□□ -1.46
UBE3DQ7Z6J8 AC244453.3-201ENST00000426275 459 ntTSL 5 BASIC5.93□□□□□ -1.46
UBE3DQ7Z6J8 USP9YP9-201ENST00000429406 715 ntBASIC5.93□□□□□ -1.46
UBE3DQ7Z6J8 LINC01372-201ENST00000430244 489 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
UBE3DQ7Z6J8 PSMD10P2-201ENST00000432890 672 ntBASIC5.93□□□□□ -1.46
UBE3DQ7Z6J8 AL035416.1-201ENST00000443012 767 ntTSL 2 BASIC5.93□□□□□ -1.46
UBE3DQ7Z6J8 AC113331.2-201ENST00000445557 926 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
UBE3DQ7Z6J8 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC5.93□□□□□ -1.46
UBE3DQ7Z6J8 AC006019.3-201ENST00000446335 698 ntTSL 3 BASIC5.93□□□□□ -1.46
UBE3DQ7Z6J8 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC5.93□□□□□ -1.46
UBE3DQ7Z6J8 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC5.93□□□□□ -1.46
UBE3DQ7Z6J8 AL513533.1-201ENST00000453728 415 ntBASIC5.93□□□□□ -1.46
UBE3DQ7Z6J8 AC073594.1-201ENST00000462065 364 ntBASIC5.93□□□□□ -1.46
UBE3DQ7Z6J8 AC098818.1-201ENST00000478593 252 ntBASIC5.93□□□□□ -1.46
UBE3DQ7Z6J8 RPL29P23-201ENST00000486188 442 ntBASIC5.93□□□□□ -1.46
UBE3DQ7Z6J8 RPL36AP51-201ENST00000487216 318 ntBASIC5.93□□□□□ -1.46
UBE3DQ7Z6J8 L3HYPDH-206ENST00000487285 700 ntTSL 3 BASIC5.93□□□□□ -1.46
UBE3DQ7Z6J8 AC092666.1-203ENST00000495144 698 ntTSL 5 BASIC5.93□□□□□ -1.46
UBE3DQ7Z6J8 SNX18P24-201ENST00000505249 671 ntBASIC5.93□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 151.8 ms