Protein–RNA interactions for Protein: P84243

H3F3A, Histone H3.3, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3AP84243 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC3.82□□□□□ -1.8
H3F3AP84243 AC103858.2-201ENST00000621471 543 ntBASIC3.82□□□□□ -1.8
H3F3AP84243 AL139254.3-201ENST00000641097 674 ntBASIC3.82□□□□□ -1.8
H3F3AP84243 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
H3F3AP84243 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
H3F3AP84243 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
H3F3AP84243 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC3.82□□□□□ -1.8
H3F3AP84243 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC3.82□□□□□ -1.8
H3F3AP84243 CCT8P1-201ENST00000413611 1657 ntBASIC3.81□□□□□ -1.8
H3F3AP84243 AL138828.1-203ENST00000419926 1570 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
H3F3AP84243 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
H3F3AP84243 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
H3F3AP84243 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC3.81□□□□□ -1.8
H3F3AP84243 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
H3F3AP84243 AC126755.2-208ENST00000327792 462 ntBASIC3.81□□□□□ -1.8
H3F3AP84243 OR6X1-201ENST00000327930 1058 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
H3F3AP84243 AC138969.1-213ENST00000331436 462 ntBASIC3.81□□□□□ -1.8
H3F3AP84243 RNU6-984P-201ENST00000363236 109 ntBASIC3.81□□□□□ -1.8
H3F3AP84243 RNA5SP513-201ENST00000364648 118 ntBASIC3.81□□□□□ -1.8
H3F3AP84243 DAB1-AS1-201ENST00000416598 1262 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
H3F3AP84243 MFSD13B-201ENST00000420133 1290 ntBASIC3.81□□□□□ -1.8
H3F3AP84243 DNAJA1P1-201ENST00000425106 1187 ntBASIC3.81□□□□□ -1.8
H3F3AP84243 RPS3AP54-201ENST00000435535 734 ntBASIC3.81□□□□□ -1.8
H3F3AP84243 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC3.81□□□□□ -1.8
H3F3AP84243 SEPT14P1-201ENST00000458703 648 ntBASIC3.81□□□□□ -1.8
H3F3AP84243 AC079804.1-201ENST00000461922 436 ntBASIC3.81□□□□□ -1.8
H3F3AP84243 AC041039.1-201ENST00000485656 536 ntBASIC3.81□□□□□ -1.8
H3F3AP84243 LINC02483-201ENST00000512043 1143 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
H3F3AP84243 ZCCHC10-209ENST00000513541 794 ntAPPRIS ALT2 TSL 2 BASIC3.81□□□□□ -1.8
H3F3AP84243 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC3.81□□□□□ -1.8
H3F3AP84243 AC007014.1-201ENST00000572828 610 ntTSL 3 BASIC3.81□□□□□ -1.8
H3F3AP84243 AC068790.5-201ENST00000602741 355 ntBASIC3.81□□□□□ -1.8
H3F3AP84243 TEX41-238ENST00000604253 709 ntTSL 5 BASIC3.81□□□□□ -1.8
H3F3AP84243 AL136295.6-201ENST00000610486 658 ntBASIC3.81□□□□□ -1.8
H3F3AP84243 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
H3F3AP84243 UBE2NL-201ENST00000618570 1185 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
H3F3AP84243 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC3.81□□□□□ -1.8
H3F3AP84243 MIR4727-201ENST00000622232 55 ntBASIC3.81□□□□□ -1.8
H3F3AP84243 NRXN1-223ENST00000625891 1164 ntTSL 4 BASIC3.81□□□□□ -1.8
H3F3AP84243 IPO5-229ENST00000631030 192 ntTSL 5 BASIC3.81□□□□□ -1.8
H3F3AP84243 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC3.81□□□□□ -1.8
H3F3AP84243 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
H3F3AP84243 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC3.81□□□□□ -1.8
H3F3AP84243 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
H3F3AP84243 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC3.81□□□□□ -1.8
H3F3AP84243 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
H3F3AP84243 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.81□□□□□ -1.8
H3F3AP84243 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC3.81□□□□□ -1.8
H3F3AP84243 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC3.81□□□□□ -1.8
H3F3AP84243 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
H3F3AP84243 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC3.81□□□□□ -1.8
H3F3AP84243 PLCZ1-206ENST00000538330 1612 ntTSL 2 BASIC3.81□□□□□ -1.8
H3F3AP84243 TCN1-201ENST00000257264 1582 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
H3F3AP84243 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
H3F3AP84243 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC3.8□□□□□ -1.8
H3F3AP84243 AP000756.2-201ENST00000624168 2567 ntBASIC3.8□□□□□ -1.8
H3F3AP84243 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
H3F3AP84243 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC3.8□□□□□ -1.8
H3F3AP84243 OR4F6-201ENST00000328882 1238 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
H3F3AP84243 OR6C74-201ENST00000343870 1105 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
H3F3AP84243 SNORD74.4-201ENST00000364129 80 ntBASIC3.8□□□□□ -1.8
H3F3AP84243 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC3.8□□□□□ -1.8
H3F3AP84243 MT-RNR1-201ENST00000389680 954 ntBASIC3.8□□□□□ -1.8
H3F3AP84243 RPL6P29-201ENST00000414863 865 ntBASIC3.8□□□□□ -1.8
H3F3AP84243 AL161631.1-201ENST00000417933 486 ntBASIC3.8□□□□□ -1.8
H3F3AP84243 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC3.8□□□□□ -1.8
H3F3AP84243 CHIAP3-201ENST00000423668 1133 ntBASIC3.8□□□□□ -1.8
H3F3AP84243 AC016712.1-201ENST00000431088 378 ntBASIC3.8□□□□□ -1.8
H3F3AP84243 PRELID3BP10-201ENST00000431957 584 ntBASIC3.8□□□□□ -1.8
H3F3AP84243 RPL12P46-201ENST00000436610 195 ntBASIC3.8□□□□□ -1.8
H3F3AP84243 SERPINA7P1-201ENST00000443077 631 ntBASIC3.8□□□□□ -1.8
H3F3AP84243 AL512380.1-202ENST00000447728 543 ntTSL 5 BASIC3.8□□□□□ -1.8
H3F3AP84243 AC115989.1-202ENST00000452153 1150 ntTSL 2 BASIC3.8□□□□□ -1.8
H3F3AP84243 AC037198.2-201ENST00000478845 733 ntBASIC3.8□□□□□ -1.8
H3F3AP84243 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC3.8□□□□□ -1.8
H3F3AP84243 AC108145.1-201ENST00000503770 153 ntBASIC3.8□□□□□ -1.8
H3F3AP84243 C5orf46-203ENST00000515291 573 ntAPPRIS ALT1 TSL 1 (best) BASIC3.8□□□□□ -1.8
H3F3AP84243 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
H3F3AP84243 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC3.8□□□□□ -1.8
H3F3AP84243 AC027701.1-202ENST00000520988 459 ntTSL 3 BASIC3.8□□□□□ -1.8
H3F3AP84243 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC3.8□□□□□ -1.8
H3F3AP84243 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC3.8□□□□□ -1.8
H3F3AP84243 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC3.8□□□□□ -1.8
H3F3AP84243 MIR3138-201ENST00000585238 82 ntBASIC3.8□□□□□ -1.8
H3F3AP84243 AL161729.3-201ENST00000603533 673 ntBASIC3.8□□□□□ -1.8
H3F3AP84243 AC026368.1-201ENST00000614934 690 ntBASIC3.8□□□□□ -1.8
H3F3AP84243 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC3.8□□□□□ -1.8
H3F3AP84243 AP003497.2-201ENST00000624220 967 ntBASIC3.8□□□□□ -1.8
H3F3AP84243 AP000843.1-201ENST00000624880 701 ntBASIC3.8□□□□□ -1.8
H3F3AP84243 MIR3653-201ENST00000625572 110 ntBASIC3.8□□□□□ -1.8
H3F3AP84243 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
H3F3AP84243 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC3.8□□□□□ -1.8
H3F3AP84243 VNN3-211ENST00000509351 1700 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
H3F3AP84243 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC3.8□□□□□ -1.8
H3F3AP84243 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
H3F3AP84243 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
H3F3AP84243 GABPB1-204ENST00000396464 1401 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
H3F3AP84243 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
H3F3AP84243 AC011266.1-201ENST00000624119 3569 ntBASIC3.79□□□□□ -1.8
H3F3AP84243 RNU6-1331P-201ENST00000363658 106 ntBASIC3.79□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 73.9 ms