Protein–RNA interactions for Protein: P83916

CBX1, Chromobox protein homolog 1, humanhuman

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1P83916 OSER1-AS1-205ENST00000623343 827 ntTSL 5 BASIC4.48□□□□□ -1.69
CBX1P83916 AC048338.2-201ENST00000623601 684 ntTSL 5 BASIC4.48□□□□□ -1.69
CBX1P83916 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC4.48□□□□□ -1.69
CBX1P83916 RABGAP1L-206ENST00000367688 1425 ntTSL 2 BASIC4.47□□□□□ -1.69
CBX1P83916 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
CBX1P83916 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC4.47□□□□□ -1.69
CBX1P83916 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC4.47□□□□□ -1.69
CBX1P83916 ATP6V1G3-203ENST00000367382 611 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
CBX1P83916 PRR21-201ENST00000408934 1170 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
CBX1P83916 DPPA2P3-201ENST00000411853 655 ntBASIC4.47□□□□□ -1.69
CBX1P83916 AC009237.5-201ENST00000414271 501 ntBASIC4.47□□□□□ -1.69
CBX1P83916 LINC01752-201ENST00000417299 438 ntTSL 2 BASIC4.47□□□□□ -1.69
CBX1P83916 AC127526.1-201ENST00000417526 366 ntBASIC4.47□□□□□ -1.69
CBX1P83916 ITGA9-AS1-202ENST00000420870 581 ntTSL 4 BASIC4.47□□□□□ -1.69
CBX1P83916 ITGA9-AS1-207ENST00000445429 532 ntTSL 5 BASIC4.47□□□□□ -1.69
CBX1P83916 KNOP1P3-201ENST00000446933 426 ntBASIC4.47□□□□□ -1.69
CBX1P83916 AC005912.1-201ENST00000495392 255 ntBASIC4.47□□□□□ -1.69
CBX1P83916 RN7SL466P-201ENST00000497546 295 ntBASIC4.47□□□□□ -1.69
CBX1P83916 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC4.47□□□□□ -1.69
CBX1P83916 RPL7L1P4-201ENST00000513004 707 ntBASIC4.47□□□□□ -1.69
CBX1P83916 IGKV2-38-201ENST00000517443 247 ntBASIC4.47□□□□□ -1.69
CBX1P83916 AC093331.2-201ENST00000520459 677 ntTSL 3 BASIC4.47□□□□□ -1.69
CBX1P83916 AC025434.1-201ENST00000520705 460 ntTSL 3 BASIC4.47□□□□□ -1.69
CBX1P83916 AC027176.2-201ENST00000559166 746 ntBASIC4.47□□□□□ -1.69
CBX1P83916 NPM1P47-201ENST00000560843 856 ntBASIC4.47□□□□□ -1.69
CBX1P83916 AC129507.1-204ENST00000573601 503 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
CBX1P83916 ZNF540-204ENST00000586792 564 ntTSL 3 BASIC4.47□□□□□ -1.69
CBX1P83916 MIMT1-201ENST00000597105 1050 ntBASIC4.47□□□□□ -1.69
CBX1P83916 uc_338.9-201ENST00000617424 182 ntBASIC4.47□□□□□ -1.69
CBX1P83916 HNF1A-AS1-205ENST00000619441 343 ntTSL 3 BASIC4.47□□□□□ -1.69
CBX1P83916 FAM26D-205ENST00000628083 1117 ntTSL 2 BASIC4.47□□□□□ -1.69
CBX1P83916 LINC00561-201ENST00000565815 2738 ntBASIC4.47□□□□□ -1.69
CBX1P83916 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC4.47□□□□□ -1.69
CBX1P83916 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC4.46□□□□□ -1.69
CBX1P83916 AL359715.4-201ENST00000606629 1436 ntBASIC4.46□□□□□ -1.69
CBX1P83916 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.69
CBX1P83916 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC4.46□□□□□ -1.69
CBX1P83916 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
CBX1P83916 LINC02085-201ENST00000465215 2051 ntTSL 2 BASIC4.46□□□□□ -1.7
CBX1P83916 OR5K4-201ENST00000354924 966 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
CBX1P83916 MIR92A2-201ENST00000385299 75 ntBASIC4.46□□□□□ -1.7
CBX1P83916 SNORA11.3-201ENST00000408471 128 ntBASIC4.46□□□□□ -1.7
CBX1P83916 ZNF92P1Y-201ENST00000415010 1191 ntBASIC4.46□□□□□ -1.7
CBX1P83916 AL391987.1-201ENST00000441025 200 ntBASIC4.46□□□□□ -1.7
CBX1P83916 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC4.46□□□□□ -1.7
CBX1P83916 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC4.46□□□□□ -1.7
CBX1P83916 AC007537.2-201ENST00000472093 511 ntBASIC4.46□□□□□ -1.7
CBX1P83916 LINC02050-201ENST00000473938 712 ntTSL 3 BASIC4.46□□□□□ -1.7
CBX1P83916 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC4.46□□□□□ -1.7
CBX1P83916 RPL23AP72-201ENST00000492447 435 ntBASIC4.46□□□□□ -1.7
CBX1P83916 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
CBX1P83916 LINC01455-201ENST00000503167 561 ntTSL 4 BASIC4.46□□□□□ -1.7
CBX1P83916 RN7SKP260-201ENST00000516907 149 ntBASIC4.46□□□□□ -1.7
CBX1P83916 AC025437.2-201ENST00000518103 548 ntTSL 4 BASIC4.46□□□□□ -1.7
CBX1P83916 AC117834.1-202ENST00000521203 561 ntTSL 4 BASIC4.46□□□□□ -1.7
CBX1P83916 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC4.46□□□□□ -1.7
CBX1P83916 AC004825.1-201ENST00000555068 586 ntBASIC4.46□□□□□ -1.7
CBX1P83916 SNORD95-201ENST00000579879 68 ntBASIC4.46□□□□□ -1.7
CBX1P83916 AC022726.1-201ENST00000587475 207 ntBASIC4.46□□□□□ -1.7
CBX1P83916 BPIFA4P-203ENST00000603168 689 ntBASIC4.46□□□□□ -1.7
CBX1P83916 AL589674.2-201ENST00000604304 337 ntBASIC4.46□□□□□ -1.7
CBX1P83916 AC104695.2-201ENST00000605056 775 ntBASIC4.46□□□□□ -1.7
CBX1P83916 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC4.46□□□□□ -1.7
CBX1P83916 SNORA11.6-201ENST00000619030 128 ntBASIC4.46□□□□□ -1.7
CBX1P83916 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
CBX1P83916 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC4.46□□□□□ -1.7
CBX1P83916 NFE2L2-204ENST00000423513 1382 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
CBX1P83916 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
CBX1P83916 ITGB3BP-201ENST00000271002 948 ntAPPRIS P3 TSL 1 (best) BASIC4.45□□□□□ -1.7
CBX1P83916 PLSCR2-201ENST00000336685 1272 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
CBX1P83916 RNA5SP242-201ENST00000364171 118 ntBASIC4.45□□□□□ -1.7
CBX1P83916 DYDC1-202ENST00000372204 750 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
CBX1P83916 SH3BGR-203ENST00000380634 816 ntTSL 5 BASIC4.45□□□□□ -1.7
CBX1P83916 RNU6-244P-201ENST00000391028 104 ntBASIC4.45□□□□□ -1.7
CBX1P83916 AC009804.1-201ENST00000400949 179 ntBASIC4.45□□□□□ -1.7
CBX1P83916 RNA5SP498-201ENST00000411342 120 ntBASIC4.45□□□□□ -1.7
CBX1P83916 AC005529.1-201ENST00000411969 289 ntTSL 5 BASIC4.45□□□□□ -1.7
CBX1P83916 LINC00161-201ENST00000412526 870 ntTSL 2 BASIC4.45□□□□□ -1.7
CBX1P83916 RPS20P14-201ENST00000412545 360 ntBASIC4.45□□□□□ -1.7
CBX1P83916 RPL23AP26-201ENST00000412728 464 ntBASIC4.45□□□□□ -1.7
CBX1P83916 AL161631.1-201ENST00000417933 486 ntBASIC4.45□□□□□ -1.7
CBX1P83916 ATP5HP2-201ENST00000433885 485 ntBASIC4.45□□□□□ -1.7
CBX1P83916 AC245517.2-201ENST00000442890 346 ntBASIC4.45□□□□□ -1.7
CBX1P83916 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC4.45□□□□□ -1.7
CBX1P83916 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC4.45□□□□□ -1.7
CBX1P83916 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC4.45□□□□□ -1.7
CBX1P83916 MTCO3P16-201ENST00000454456 754 ntBASIC4.45□□□□□ -1.7
CBX1P83916 AC005229.2-201ENST00000456995 399 ntBASIC4.45□□□□□ -1.7
CBX1P83916 AP006216.2-201ENST00000457746 333 ntTSL 5 BASIC4.45□□□□□ -1.7
CBX1P83916 RNU6-775P-201ENST00000459318 96 ntBASIC4.45□□□□□ -1.7
CBX1P83916 RN7SL174P-201ENST00000475578 289 ntBASIC4.45□□□□□ -1.7
CBX1P83916 RPL7AP6-201ENST00000477943 801 ntBASIC4.45□□□□□ -1.7
CBX1P83916 MAL2-208ENST00000523307 556 ntTSL 4 BASIC4.45□□□□□ -1.7
CBX1P83916 AC113386.1-201ENST00000523584 381 ntTSL 5 BASIC4.45□□□□□ -1.7
CBX1P83916 OR4A46P-201ENST00000527255 933 ntBASIC4.45□□□□□ -1.7
CBX1P83916 AC008083.2-201ENST00000546707 476 ntBASIC4.45□□□□□ -1.7
CBX1P83916 MIR3614-201ENST00000581261 86 ntBASIC4.45□□□□□ -1.7
CBX1P83916 AC090953.1-201ENST00000604305 1092 ntBASIC4.45□□□□□ -1.7
CBX1P83916 WWOX-217ENST00000620008 450 ntTSL 2 BASIC4.45□□□□□ -1.7
CBX1P83916 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC4.45□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 79.4 ms