Protein–RNA interactions for Protein: P78556

CCL20, C-C motif chemokine 20, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL20P78556 OR51F2-202ENST00000641672 1136 ntAPPRIS P2 BASIC3.21□□□□□ -1.9
CCL20P78556 CASC19-284ENST00000642142 1868 ntBASIC3.21□□□□□ -1.9
CCL20P78556 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
CCL20P78556 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.21□□□□□ -1.9
CCL20P78556 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
CCL20P78556 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC3.21□□□□□ -1.9
CCL20P78556 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC3.2□□□□□ -1.9
CCL20P78556 POPDC3-201ENST00000254765 1345 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
CCL20P78556 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
CCL20P78556 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC3.2□□□□□ -1.9
CCL20P78556 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
CCL20P78556 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC3.2□□□□□ -1.9
CCL20P78556 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
CCL20P78556 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC3.2□□□□□ -1.9
CCL20P78556 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
CCL20P78556 GNAS-202ENST00000306090 477 ntTSL 5 BASIC3.2□□□□□ -1.9
CCL20P78556 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC3.2□□□□□ -1.9
CCL20P78556 RNA5SP242-201ENST00000364171 118 ntBASIC3.2□□□□□ -1.9
CCL20P78556 FIG4-202ENST00000368941 791 ntTSL 3 BASIC3.2□□□□□ -1.9
CCL20P78556 RNU6-225P-201ENST00000384613 103 ntBASIC3.2□□□□□ -1.9
CCL20P78556 SNORA17A-201ENST00000391185 133 ntBASIC3.2□□□□□ -1.9
CCL20P78556 AC022535.1-201ENST00000420082 691 ntTSL 3 BASIC3.2□□□□□ -1.9
CCL20P78556 CHIAP3-201ENST00000423668 1133 ntBASIC3.2□□□□□ -1.9
CCL20P78556 AL138785.1-201ENST00000425821 331 ntBASIC3.2□□□□□ -1.9
CCL20P78556 LIX1L-AS1-205ENST00000437797 536 ntTSL 3 BASIC3.2□□□□□ -1.9
CCL20P78556 CACYBPP1-201ENST00000438592 684 ntBASIC3.2□□□□□ -1.9
CCL20P78556 AC068491.2-201ENST00000438897 617 ntTSL 2 BASIC3.2□□□□□ -1.9
CCL20P78556 LINC01035-201ENST00000445072 784 ntTSL 3 BASIC3.2□□□□□ -1.9
CCL20P78556 RPL23AP81-201ENST00000455252 467 ntBASIC3.2□□□□□ -1.9
CCL20P78556 AC109992.2-201ENST00000460977 765 ntTSL 3 BASIC3.2□□□□□ -1.9
CCL20P78556 RN7SL738P-201ENST00000470264 297 ntBASIC3.2□□□□□ -1.9
CCL20P78556 CEP170-216ENST00000490813 1070 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
CCL20P78556 ZCCHC10-203ENST00000504170 325 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
CCL20P78556 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC3.2□□□□□ -1.9
CCL20P78556 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC3.2□□□□□ -1.9
CCL20P78556 AC090541.1-201ENST00000519803 467 ntTSL 3 BASIC3.2□□□□□ -1.9
CCL20P78556 AC008663.1-201ENST00000519821 455 ntTSL 4 BASIC3.2□□□□□ -1.9
CCL20P78556 AC091515.1-201ENST00000548110 679 ntBASIC3.2□□□□□ -1.9
CCL20P78556 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
CCL20P78556 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC3.2□□□□□ -1.9
CCL20P78556 AC084757.1-201ENST00000559987 490 ntBASIC3.2□□□□□ -1.9
CCL20P78556 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC3.2□□□□□ -1.9
CCL20P78556 BGLT3-201ENST00000564523 994 ntBASIC3.2□□□□□ -1.9
CCL20P78556 AC074237.1-201ENST00000577674 471 ntTSL 3 BASIC3.2□□□□□ -1.9
CCL20P78556 AC012417.1-201ENST00000582307 1039 ntBASIC3.2□□□□□ -1.9
CCL20P78556 AP001160.4-201ENST00000596971 382 ntBASIC3.2□□□□□ -1.9
CCL20P78556 CT45A3-202ENST00000598716 855 ntAPPRIS P1 TSL 3 BASIC3.2□□□□□ -1.9
CCL20P78556 AL512782.1-201ENST00000603093 364 ntBASIC3.2□□□□□ -1.9
CCL20P78556 AC034236.3-201ENST00000605999 461 ntBASIC3.2□□□□□ -1.9
CCL20P78556 AL022238.2-202ENST00000607915 658 ntTSL 5 BASIC3.2□□□□□ -1.9
CCL20P78556 AC000123.2-201ENST00000623124 461 ntBASIC3.2□□□□□ -1.9
CCL20P78556 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC3.2□□□□□ -1.9
CCL20P78556 SNORA17.5-201ENST00000630429 132 ntBASIC3.2□□□□□ -1.9
CCL20P78556 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC3.2□□□□□ -1.9
CCL20P78556 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC3.2□□□□□ -1.9
CCL20P78556 PABPC1P6-201ENST00000445594 1829 ntBASIC3.2□□□□□ -1.9
CCL20P78556 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
CCL20P78556 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
CCL20P78556 AC007342.7-201ENST00000624610 2337 ntBASIC3.2□□□□□ -1.9
CCL20P78556 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
CCL20P78556 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
CCL20P78556 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC3.19□□□□□ -1.9
CCL20P78556 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
CCL20P78556 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC3.19□□□□□ -1.9
CCL20P78556 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC3.19□□□□□ -1.9
CCL20P78556 AL445437.1-201ENST00000623157 3087 ntBASIC3.19□□□□□ -1.9
CCL20P78556 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
CCL20P78556 AL034374.1-201ENST00000406329 351 ntBASIC3.19□□□□□ -1.9
CCL20P78556 AC010740.1-201ENST00000417035 684 ntBASIC3.19□□□□□ -1.9
CCL20P78556 AL590006.1-201ENST00000417390 752 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
CCL20P78556 AC093162.1-201ENST00000419682 124 ntBASIC3.19□□□□□ -1.9
CCL20P78556 RPL21P109-201ENST00000422213 475 ntBASIC3.19□□□□□ -1.9
CCL20P78556 RWDD4P2-201ENST00000426392 563 ntBASIC3.19□□□□□ -1.9
CCL20P78556 LINC01798-203ENST00000428590 553 ntTSL 4 BASIC3.19□□□□□ -1.9
CCL20P78556 AL034405.1-201ENST00000432062 526 ntTSL 2 BASIC3.19□□□□□ -1.9
CCL20P78556 BMS1P19-201ENST00000433925 393 ntBASIC3.19□□□□□ -1.9
CCL20P78556 LBX1-AS1-202ENST00000434878 418 ntTSL 5 BASIC3.19□□□□□ -1.9
CCL20P78556 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC3.19□□□□□ -1.9
CCL20P78556 TRIM31-AS1-204ENST00000440874 549 ntTSL 3 BASIC3.19□□□□□ -1.9
CCL20P78556 CNOT7P2-201ENST00000441051 832 ntBASIC3.19□□□□□ -1.9
CCL20P78556 AC092809.1-201ENST00000441469 474 ntBASIC3.19□□□□□ -1.9
CCL20P78556 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC3.19□□□□□ -1.9
CCL20P78556 EEF1A1P1-201ENST00000447052 739 ntBASIC3.19□□□□□ -1.9
CCL20P78556 COPS8P2-201ENST00000473228 627 ntBASIC3.19□□□□□ -1.9
CCL20P78556 RN7SL727P-201ENST00000482164 296 ntBASIC3.19□□□□□ -1.9
CCL20P78556 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC3.19□□□□□ -1.9
CCL20P78556 RWDD4P1-201ENST00000488019 565 ntBASIC3.19□□□□□ -1.9
CCL20P78556 RPL7P24-201ENST00000493052 752 ntBASIC3.19□□□□□ -1.9
CCL20P78556 PRELID3BP7-201ENST00000503606 469 ntBASIC3.19□□□□□ -1.9
CCL20P78556 AC097512.1-203ENST00000506425 957 ntTSL 3 BASIC3.19□□□□□ -1.9
CCL20P78556 AP001960.1-201ENST00000506494 658 ntBASIC3.19□□□□□ -1.9
CCL20P78556 AC010445.1-201ENST00000507674 440 ntTSL 5 BASIC3.19□□□□□ -1.9
CCL20P78556 AC093824.1-201ENST00000508796 343 ntBASIC3.19□□□□□ -1.9
CCL20P78556 AC021192.1-201ENST00000510169 791 ntTSL 3 BASIC3.19□□□□□ -1.9
CCL20P78556 RN7SKP70-201ENST00000516655 271 ntBASIC3.19□□□□□ -1.9
CCL20P78556 RNU7-143P-201ENST00000516781 65 ntBASIC3.19□□□□□ -1.9
CCL20P78556 SMARCE1P4-201ENST00000523647 241 ntBASIC3.19□□□□□ -1.9
CCL20P78556 OR7E10P-201ENST00000526420 991 ntBASIC3.19□□□□□ -1.9
CCL20P78556 AP000827.1-201ENST00000527814 258 ntBASIC3.19□□□□□ -1.9
CCL20P78556 TPPP2-208ENST00000530140 703 ntAPPRIS P1 TSL 2 BASIC3.19□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 72.3 ms