Protein–RNA interactions for Protein: P60507

ERVFC1, Endogenous retrovirus group FC1 Env polyprotein, humanhuman

Predictions only

Length 584 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERVFC1P60507 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC6.1□□□□□ -1.43
ERVFC1P60507 AC024589.1-201ENST00000512207 263 ntBASIC6.1□□□□□ -1.43
ERVFC1P60507 AC093305.1-201ENST00000514105 522 ntTSL 5 BASIC6.1□□□□□ -1.43
ERVFC1P60507 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC6.1□□□□□ -1.43
ERVFC1P60507 MIR2117-201ENST00000516780 80 ntBASIC6.1□□□□□ -1.43
ERVFC1P60507 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC6.1□□□□□ -1.43
ERVFC1P60507 CENPUP1-201ENST00000526649 1202 ntBASIC6.1□□□□□ -1.43
ERVFC1P60507 AC027804.1-201ENST00000534653 529 ntTSL 2 BASIC6.1□□□□□ -1.43
ERVFC1P60507 AL049875.1-202ENST00000556620 857 ntTSL 3 BASIC6.1□□□□□ -1.43
ERVFC1P60507 AC006960.3-201ENST00000561845 705 ntBASIC6.1□□□□□ -1.43
ERVFC1P60507 AL390726.5-202ENST00000564800 256 ntBASIC6.1□□□□□ -1.43
ERVFC1P60507 AC074050.3-201ENST00000569175 441 ntTSL 4 BASIC6.1□□□□□ -1.43
ERVFC1P60507 LCMT1-AS1-204ENST00000569920 474 ntTSL 2 BASIC6.1□□□□□ -1.43
ERVFC1P60507 MOCS2-209ENST00000582677 741 ntTSL 5 BASIC6.1□□□□□ -1.43
ERVFC1P60507 CDC37L1-AS1-202ENST00000609131 235 ntTSL 2 BASIC6.1□□□□□ -1.43
ERVFC1P60507 RPSAP73-201ENST00000614820 330 ntBASIC6.1□□□□□ -1.43
ERVFC1P60507 AC140479.2-201ENST00000421567 3130 ntBASIC6.1□□□□□ -1.43
ERVFC1P60507 STAG2-202ENST00000371144 4281 ntAPPRIS P3 TSL 1 (best) BASIC6.1□□□□□ -1.43
ERVFC1P60507 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC6.1□□□□□ -1.43
ERVFC1P60507 ZNF101P1-201ENST00000435701 1720 ntBASIC6.1□□□□□ -1.43
ERVFC1P60507 USP46-201ENST00000441222 7954 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
ERVFC1P60507 PLCE1-203ENST00000371385 6500 ntAPPRIS ALT2 TSL 5 BASIC6.1□□□□□ -1.43
ERVFC1P60507 OR9Q2-202ENST00000641291 3774 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
ERVFC1P60507 FAM13A-AS1-201ENST00000500765 3210 ntTSL 2 BASIC6.1□□□□□ -1.43
ERVFC1P60507 ATMIN-204ENST00000564241 4803 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
ERVFC1P60507 DGKB-202ENST00000402815 5595 ntAPPRIS ALT1 TSL 5 BASIC6.09□□□□□ -1.43
ERVFC1P60507 LINC01378-201ENST00000422145 2516 ntTSL 3 BASIC6.09□□□□□ -1.43
ERVFC1P60507 DLG1-213ENST00000443183 2516 ntTSL 2 BASIC6.09□□□□□ -1.43
ERVFC1P60507 AL161912.4-201ENST00000623889 2468 ntBASIC6.09□□□□□ -1.43
ERVFC1P60507 AP002001.2-201ENST00000529025 1469 ntBASIC6.09□□□□□ -1.43
ERVFC1P60507 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC6.09□□□□□ -1.43
ERVFC1P60507 EIF5AL1-201ENST00000520547 3840 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
ERVFC1P60507 GTDC1-201ENST00000241391 2356 ntTSL 2 BASIC6.09□□□□□ -1.43
ERVFC1P60507 SMC1A-202ENST00000375340 9930 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
ERVFC1P60507 TSPAN14-207ENST00000429989 16183 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
ERVFC1P60507 OR2AT4-202ENST00000641504 8661 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
ERVFC1P60507 VNN3-207ENST00000425515 1761 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
ERVFC1P60507 ACACA-231ENST00000614428 9554 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
ERVFC1P60507 RPL39P5-201ENST00000273411 449 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
ERVFC1P60507 CCNB3-202ENST00000348603 1201 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
ERVFC1P60507 Y_RNA.311-201ENST00000365068 96 ntBASIC6.09□□□□□ -1.43
ERVFC1P60507 CCNB3-203ENST00000376038 1201 ntTSL 5 BASIC6.09□□□□□ -1.43
ERVFC1P60507 MT-TD-201ENST00000387419 68 ntBASIC6.09□□□□□ -1.43
ERVFC1P60507 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
ERVFC1P60507 CACNB4-203ENST00000397327 2112 ntTSL 5 BASIC6.09□□□□□ -1.43
ERVFC1P60507 GAPDHP42-201ENST00000406848 981 ntBASIC6.09□□□□□ -1.43
ERVFC1P60507 PIGPP2-201ENST00000411569 458 ntBASIC6.09□□□□□ -1.43
ERVFC1P60507 AC025946.1-201ENST00000413286 430 ntTSL 3 BASIC6.09□□□□□ -1.43
ERVFC1P60507 LINC00364-201ENST00000415120 611 ntTSL 3 BASIC6.09□□□□□ -1.43
ERVFC1P60507 RPL23AP27-201ENST00000415161 451 ntBASIC6.09□□□□□ -1.43
ERVFC1P60507 ICA1L-206ENST00000418208 602 ntTSL 4 BASIC6.09□□□□□ -1.43
ERVFC1P60507 SLC35E1P1-201ENST00000419313 864 ntBASIC6.09□□□□□ -1.43
ERVFC1P60507 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC6.09□□□□□ -1.43
ERVFC1P60507 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC6.09□□□□□ -1.43
ERVFC1P60507 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC6.09□□□□□ -1.43
ERVFC1P60507 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC6.09□□□□□ -1.43
ERVFC1P60507 OR6C5P-201ENST00000452388 923 ntBASIC6.09□□□□□ -1.43
ERVFC1P60507 AP000472.1-201ENST00000452500 530 ntTSL 2 BASIC6.09□□□□□ -1.43
ERVFC1P60507 ANK3-207ENST00000460468 677 ntTSL 3 BASIC6.09□□□□□ -1.43
ERVFC1P60507 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC6.09□□□□□ -1.43
ERVFC1P60507 RN7SL165P-201ENST00000477476 291 ntBASIC6.09□□□□□ -1.43
ERVFC1P60507 RPL23AP37-201ENST00000479658 549 ntBASIC6.09□□□□□ -1.43
ERVFC1P60507 RPL7P39-201ENST00000481157 744 ntBASIC6.09□□□□□ -1.43
ERVFC1P60507 ACTG1P13-201ENST00000486987 1043 ntBASIC6.09□□□□□ -1.43
ERVFC1P60507 AC073610.1-201ENST00000489971 396 ntBASIC6.09□□□□□ -1.43
ERVFC1P60507 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC6.09□□□□□ -1.43
ERVFC1P60507 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC6.09□□□□□ -1.43
ERVFC1P60507 RPS3A-210ENST00000512690 845 ntTSL 3 BASIC6.09□□□□□ -1.43
ERVFC1P60507 ARL2BPP6-201ENST00000512757 439 ntBASIC6.09□□□□□ -1.43
ERVFC1P60507 AC108120.2-201ENST00000512973 294 ntBASIC6.09□□□□□ -1.43
ERVFC1P60507 AC022784.3-202ENST00000517816 826 ntTSL 3 BASIC6.09□□□□□ -1.43
ERVFC1P60507 LINC00589-202ENST00000518623 938 ntTSL 4 BASIC6.09□□□□□ -1.43
ERVFC1P60507 AC011008.1-201ENST00000522026 439 ntTSL 3 BASIC6.09□□□□□ -1.43
ERVFC1P60507 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC6.09□□□□□ -1.43
ERVFC1P60507 AC090592.1-202ENST00000533049 568 ntTSL 4 BASIC6.09□□□□□ -1.43
ERVFC1P60507 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC6.09□□□□□ -1.43
ERVFC1P60507 C14orf2-211ENST00000557040 472 ntAPPRIS P1 TSL 3 BASIC6.09□□□□□ -1.43
ERVFC1P60507 AC127502.1-204ENST00000564861 618 ntTSL 3 BASIC6.09□□□□□ -1.43
ERVFC1P60507 AP001836.1-201ENST00000604675 523 ntBASIC6.09□□□□□ -1.43
ERVFC1P60507 UBE2Q2P2-203ENST00000613592 761 ntBASIC6.09□□□□□ -1.43
ERVFC1P60507 AC243829.4-201ENST00000620056 701 ntTSL 5 BASIC6.09□□□□□ -1.43
ERVFC1P60507 MUC4-215ENST00000475231 16273 ntAPPRIS ALT2 TSL 5 BASIC6.09□□□□□ -1.43
ERVFC1P60507 C4orf17-201ENST00000326581 1636 ntAPPRIS P2 TSL 1 (best) BASIC6.09□□□□□ -1.43
ERVFC1P60507 KLHL4-201ENST00000373114 2445 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
ERVFC1P60507 CLASP2-205ENST00000461133 4814 ntTSL 5 BASIC6.09□□□□□ -1.43
ERVFC1P60507 NCOA2-201ENST00000452400 8447 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
ERVFC1P60507 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
ERVFC1P60507 RMDN2-201ENST00000234195 1985 ntTSL 2 BASIC6.09□□□□□ -1.43
ERVFC1P60507 KLHL13-202ENST00000371876 5331 ntTSL 1 (best) BASIC6.09□□□□□ -1.44
ERVFC1P60507 VPS35-201ENST00000299138 6790 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.44
ERVFC1P60507 NOL8-214ENST00000535387 3390 ntAPPRIS ALT2 TSL 5 BASIC6.09□□□□□ -1.44
ERVFC1P60507 ZNF699-203ENST00000591998 3358 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.44
ERVFC1P60507 DMXL1-215ENST00000539542 11236 ntTSL 1 (best) BASIC6.09□□□□□ -1.44
ERVFC1P60507 OR4K13-202ENST00000641664 5980 ntAPPRIS P1 BASIC6.09□□□□□ -1.44
ERVFC1P60507 ZNF480-204ENST00000490272 2238 ntTSL 2 BASIC6.09□□□□□ -1.44
ERVFC1P60507 RAB3B-201ENST00000371655 12844 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.44
ERVFC1P60507 ZNF737-201ENST00000427401 2867 ntAPPRIS P1 TSL 2 BASIC6.08□□□□□ -1.44
ERVFC1P60507 AC005703.1-201ENST00000431343 1773 ntTSL 2 BASIC6.08□□□□□ -1.44
ERVFC1P60507 GVINP1-201ENST00000526769 8438 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
ERVFC1P60507 CLSPN-202ENST00000318121 4169 ntAPPRIS P3 TSL 1 (best) BASIC6.08□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 85.1 ms