Protein–RNA interactions for Protein: P57739

CLDN2, Claudin-2, humanhuman

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN2P57739 AC140725.3-201ENST00000616193 880 ntBASIC4.8□□□□□ -1.64
CLDN2P57739 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC4.8□□□□□ -1.64
CLDN2P57739 AC123767.1-202ENST00000620407 817 ntBASIC4.8□□□□□ -1.64
CLDN2P57739 AC109454.4-201ENST00000623411 649 ntBASIC4.8□□□□□ -1.64
CLDN2P57739 CR381572.2-201ENST00000624852 397 ntBASIC4.8□□□□□ -1.64
CLDN2P57739 AL121594.5-201ENST00000631724 573 ntBASIC4.8□□□□□ -1.64
CLDN2P57739 OR1S2-202ENST00000641683 941 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
CLDN2P57739 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC4.8□□□□□ -1.64
CLDN2P57739 AC093671.1-201ENST00000624981 2929 ntBASIC4.8□□□□□ -1.64
CLDN2P57739 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC4.8□□□□□ -1.64
CLDN2P57739 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
CLDN2P57739 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC4.79□□□□□ -1.64
CLDN2P57739 TRIM51GP-201ENST00000534741 1350 ntBASIC4.79□□□□□ -1.64
CLDN2P57739 AC096656.1-201ENST00000623826 1364 ntBASIC4.79□□□□□ -1.64
CLDN2P57739 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
CLDN2P57739 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
CLDN2P57739 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
CLDN2P57739 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC4.79□□□□□ -1.64
CLDN2P57739 PCF11-AS1-201ENST00000602322 1516 ntBASIC4.79□□□□□ -1.64
CLDN2P57739 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC4.79□□□□□ -1.64
CLDN2P57739 Y_RNA.578-201ENST00000390903 88 ntBASIC4.79□□□□□ -1.64
CLDN2P57739 RPL21P67-201ENST00000402896 478 ntBASIC4.79□□□□□ -1.64
CLDN2P57739 PCNPP4-201ENST00000414817 517 ntBASIC4.79□□□□□ -1.64
CLDN2P57739 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC4.79□□□□□ -1.64
CLDN2P57739 TRGV6-201ENST00000417928 299 ntBASIC4.79□□□□□ -1.64
CLDN2P57739 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC4.79□□□□□ -1.64
CLDN2P57739 LINC01468-201ENST00000422763 570 ntTSL 3 BASIC4.79□□□□□ -1.64
CLDN2P57739 FABP7P1-201ENST00000424004 391 ntBASIC4.79□□□□□ -1.64
CLDN2P57739 AP001324.1-201ENST00000428553 399 ntBASIC4.79□□□□□ -1.64
CLDN2P57739 DNAJC19P7-201ENST00000428811 344 ntBASIC4.79□□□□□ -1.64
CLDN2P57739 AL136231.1-201ENST00000429407 730 ntBASIC4.79□□□□□ -1.64
CLDN2P57739 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC4.79□□□□□ -1.64
CLDN2P57739 MTCYBP15-201ENST00000433123 1127 ntBASIC4.79□□□□□ -1.64
CLDN2P57739 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC4.79□□□□□ -1.64
CLDN2P57739 VN1R25P-201ENST00000443385 738 ntBASIC4.79□□□□□ -1.64
CLDN2P57739 CASP3P1-201ENST00000446037 609 ntBASIC4.79□□□□□ -1.64
CLDN2P57739 AC060834.2-201ENST00000447999 618 ntTSL 3 BASIC4.79□□□□□ -1.64
CLDN2P57739 CEACAMP6-201ENST00000452007 574 ntBASIC4.79□□□□□ -1.64
CLDN2P57739 OFD1P7Y-201ENST00000454643 1155 ntBASIC4.79□□□□□ -1.64
CLDN2P57739 RNU7-140P-201ENST00000459546 60 ntBASIC4.79□□□□□ -1.64
CLDN2P57739 TRBV8-2-201ENST00000475637 270 ntBASIC4.79□□□□□ -1.64
CLDN2P57739 RN7SL481P-201ENST00000477764 299 ntBASIC4.79□□□□□ -1.64
CLDN2P57739 C1orf143-202ENST00000491260 813 ntTSL 3 BASIC4.79□□□□□ -1.64
CLDN2P57739 AC109349.1-201ENST00000503299 758 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
CLDN2P57739 ENPP7P11-201ENST00000505915 627 ntBASIC4.79□□□□□ -1.64
CLDN2P57739 AC008592.2-201ENST00000506070 571 ntTSL 3 BASIC4.79□□□□□ -1.64
CLDN2P57739 Y_RNA.717-201ENST00000517106 92 ntBASIC4.79□□□□□ -1.64
CLDN2P57739 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC4.79□□□□□ -1.64
CLDN2P57739 IGKV1-32-201ENST00000519290 311 ntBASIC4.79□□□□□ -1.64
CLDN2P57739 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC4.79□□□□□ -1.64
CLDN2P57739 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC4.79□□□□□ -1.64
CLDN2P57739 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC4.79□□□□□ -1.64
CLDN2P57739 AC011853.2-201ENST00000526901 774 ntTSL 5 BASIC4.79□□□□□ -1.64
CLDN2P57739 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
CLDN2P57739 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC4.79□□□□□ -1.64
CLDN2P57739 AL133485.1-201ENST00000555966 392 ntTSL 2 BASIC4.79□□□□□ -1.64
CLDN2P57739 AJ003147.1-201ENST00000576762 454 ntTSL 3 BASIC4.79□□□□□ -1.64
CLDN2P57739 VN1R84P-201ENST00000593697 235 ntBASIC4.79□□□□□ -1.64
CLDN2P57739 AC092316.1-201ENST00000598703 297 ntTSL 5 BASIC4.79□□□□□ -1.64
CLDN2P57739 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC4.79□□□□□ -1.64
CLDN2P57739 AL137078.2-201ENST00000615740 318 ntTSL 5 BASIC4.79□□□□□ -1.64
CLDN2P57739 U6.48-201ENST00000618523 106 ntBASIC4.79□□□□□ -1.64
CLDN2P57739 AC006963.1-201ENST00000624003 1052 ntBASIC4.79□□□□□ -1.64
CLDN2P57739 AC073869.10-201ENST00000642016 354 ntBASIC4.79□□□□□ -1.64
CLDN2P57739 BX649567.1-201ENST00000642071 1134 ntBASIC4.79□□□□□ -1.64
CLDN2P57739 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
CLDN2P57739 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC4.79□□□□□ -1.64
CLDN2P57739 MED23-203ENST00000368058 4576 ntTSL 5 BASIC4.79□□□□□ -1.64
CLDN2P57739 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
CLDN2P57739 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
CLDN2P57739 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
CLDN2P57739 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC4.79□□□□□ -1.64
CLDN2P57739 Z95331.1-201ENST00000623075 23112 ntBASIC4.78□□□□□ -1.64
CLDN2P57739 BMPR1APS1-201ENST00000403332 1598 ntBASIC4.78□□□□□ -1.64
CLDN2P57739 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
CLDN2P57739 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC4.78□□□□□ -1.64
CLDN2P57739 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
CLDN2P57739 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
CLDN2P57739 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC4.78□□□□□ -1.64
CLDN2P57739 IL21-201ENST00000264497 629 ntAPPRIS P3 TSL 1 (best) BASIC4.78□□□□□ -1.64
CLDN2P57739 PIH1D2-201ENST00000280350 1241 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
CLDN2P57739 OR14C36-201ENST00000317861 939 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
CLDN2P57739 RNU4-51P-201ENST00000364206 140 ntBASIC4.78□□□□□ -1.64
CLDN2P57739 RNU6-353P-201ENST00000364266 108 ntBASIC4.78□□□□□ -1.64
CLDN2P57739 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC4.78□□□□□ -1.64
CLDN2P57739 RNU6-906P-201ENST00000384700 70 ntBASIC4.78□□□□□ -1.64
CLDN2P57739 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
CLDN2P57739 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC4.78□□□□□ -1.64
CLDN2P57739 TAF13P2-201ENST00000416876 286 ntBASIC4.78□□□□□ -1.64
CLDN2P57739 AC048351.1-201ENST00000420064 602 ntBASIC4.78□□□□□ -1.64
CLDN2P57739 AC068287.1-201ENST00000430283 295 ntBASIC4.78□□□□□ -1.64
CLDN2P57739 PIH1D2-202ENST00000431456 1245 ntTSL 5 BASIC4.78□□□□□ -1.64
CLDN2P57739 AL359265.2-201ENST00000434367 631 ntBASIC4.78□□□□□ -1.64
CLDN2P57739 AC009263.1-201ENST00000441193 1239 ntBASIC4.78□□□□□ -1.64
CLDN2P57739 AL353743.2-203ENST00000443630 492 ntTSL 3 BASIC4.78□□□□□ -1.64
CLDN2P57739 AC007179.2-204ENST00000444001 765 ntTSL 3 BASIC4.78□□□□□ -1.64
CLDN2P57739 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC4.78□□□□□ -1.64
CLDN2P57739 AL365271.1-201ENST00000448909 603 ntTSL 3 BASIC4.78□□□□□ -1.64
CLDN2P57739 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC4.78□□□□□ -1.64
CLDN2P57739 AC093166.2-201ENST00000455969 1017 ntBASIC4.78□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 92.2 ms