Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 AC007179.2-204ENST00000444001 765 ntTSL 3 BASIC4.6□□□□□ -1.67
CDH13P55290 AC073850.1-201ENST00000449243 255 ntBASIC4.6□□□□□ -1.67
CDH13P55290 LINC00704-203ENST00000449712 703 ntTSL 3 BASIC4.6□□□□□ -1.67
CDH13P55290 Z95152.1-201ENST00000453556 656 ntBASIC4.6□□□□□ -1.67
CDH13P55290 FCF1P6-201ENST00000456841 595 ntBASIC4.6□□□□□ -1.67
CDH13P55290 CFLAR-225ENST00000494258 693 ntTSL 3 BASIC4.6□□□□□ -1.67
CDH13P55290 AL035404.1-201ENST00000497982 568 ntBASIC4.6□□□□□ -1.67
CDH13P55290 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC4.6□□□□□ -1.67
CDH13P55290 AC104108.1-201ENST00000509930 412 ntBASIC4.6□□□□□ -1.67
CDH13P55290 RNU6ATAC24P-201ENST00000516811 135 ntBASIC4.6□□□□□ -1.67
CDH13P55290 TBCA-203ENST00000517679 545 ntTSL 3 BASIC4.6□□□□□ -1.67
CDH13P55290 AC087242.1-201ENST00000536931 572 ntTSL 4 BASIC4.6□□□□□ -1.67
CDH13P55290 NOVA1-AS1-203ENST00000552101 468 ntTSL 3 BASIC4.6□□□□□ -1.67
CDH13P55290 SNHG14-221ENST00000554726 1116 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
CDH13P55290 LINC02188-201ENST00000562064 550 ntTSL 4 BASIC4.6□□□□□ -1.67
CDH13P55290 AC007496.1-201ENST00000565641 739 ntTSL 3 BASIC4.6□□□□□ -1.67
CDH13P55290 AC015912.2-201ENST00000571053 181 ntBASIC4.6□□□□□ -1.67
CDH13P55290 AC209154.1-201ENST00000582156 337 ntBASIC4.6□□□□□ -1.67
CDH13P55290 AC011444.3-201ENST00000588342 325 ntTSL 3 BASIC4.6□□□□□ -1.67
CDH13P55290 AL353600.1-201ENST00000608148 251 ntBASIC4.6□□□□□ -1.67
CDH13P55290 AC024933.1-201ENST00000608472 348 ntBASIC4.6□□□□□ -1.67
CDH13P55290 FAM27B-201ENST00000610601 213 ntBASIC4.6□□□□□ -1.67
CDH13P55290 AC100847.1-201ENST00000611316 481 ntBASIC4.6□□□□□ -1.67
CDH13P55290 AL121612.2-201ENST00000612261 482 ntBASIC4.6□□□□□ -1.67
CDH13P55290 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
CDH13P55290 MIR6826-201ENST00000617808 98 ntBASIC4.6□□□□□ -1.67
CDH13P55290 AC005086.4-201ENST00000623065 213 ntBASIC4.6□□□□□ -1.67
CDH13P55290 CR381572.2-201ENST00000624852 397 ntBASIC4.6□□□□□ -1.67
CDH13P55290 CR392039.4-201ENST00000624968 501 ntBASIC4.6□□□□□ -1.67
CDH13P55290 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC4.6□□□□□ -1.67
CDH13P55290 CDRT1-208ENST00000630868 794 ntBASIC4.6□□□□□ -1.67
CDH13P55290 SLC8A1-AS1-239ENST00000631142 623 ntTSL 5 BASIC4.6□□□□□ -1.67
CDH13P55290 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
CDH13P55290 LINC01808-202ENST00000641680 1116 ntBASIC4.6□□□□□ -1.67
CDH13P55290 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
CDH13P55290 MAPK10-320ENST00000641462 6696 ntBASIC4.6□□□□□ -1.67
CDH13P55290 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
CDH13P55290 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC4.6□□□□□ -1.67
CDH13P55290 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
CDH13P55290 SAMMSON-226ENST00000642089 1582 ntBASIC4.6□□□□□ -1.67
CDH13P55290 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
CDH13P55290 AC092162.3-201ENST00000624511 1624 ntBASIC4.6□□□□□ -1.67
CDH13P55290 NSRP1P1-201ENST00000444067 1693 ntBASIC4.6□□□□□ -1.67
CDH13P55290 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC4.6□□□□□ -1.67
CDH13P55290 ACKR4-201ENST00000249887 1914 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
CDH13P55290 PMCHL1-201ENST00000418902 1917 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
CDH13P55290 LYST-202ENST00000389794 12985 ntTSL 5 BASIC4.6□□□□□ -1.67
CDH13P55290 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC4.6□□□□□ -1.67
CDH13P55290 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
CDH13P55290 MAPK10-303ENST00000641324 3959 ntBASIC4.59□□□□□ -1.67
CDH13P55290 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC4.59□□□□□ -1.67
CDH13P55290 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
CDH13P55290 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
CDH13P55290 OR56B2P-201ENST00000317102 954 ntBASIC4.59□□□□□ -1.67
CDH13P55290 IL6STP1-201ENST00000346911 1020 ntBASIC4.59□□□□□ -1.67
CDH13P55290 RNA5SP123-201ENST00000363244 119 ntBASIC4.59□□□□□ -1.67
CDH13P55290 RNU5B-4P-201ENST00000363508 111 ntBASIC4.59□□□□□ -1.67
CDH13P55290 SNORA68.2-201ENST00000391263 128 ntBASIC4.59□□□□□ -1.67
CDH13P55290 SYCP3-202ENST00000392924 845 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
CDH13P55290 MIR1303-201ENST00000408625 86 ntBASIC4.59□□□□□ -1.67
CDH13P55290 AC114755.2-201ENST00000413520 361 ntBASIC4.59□□□□□ -1.67
CDH13P55290 TRAPPC2P10-201ENST00000415662 323 ntBASIC4.59□□□□□ -1.67
CDH13P55290 CDY14P-201ENST00000431260 1014 ntBASIC4.59□□□□□ -1.67
CDH13P55290 PRPF38AP2-201ENST00000438179 851 ntBASIC4.59□□□□□ -1.67
CDH13P55290 ARF4P4-201ENST00000439608 520 ntBASIC4.59□□□□□ -1.67
CDH13P55290 CDY12P-201ENST00000440679 1015 ntBASIC4.59□□□□□ -1.67
CDH13P55290 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC4.59□□□□□ -1.67
CDH13P55290 CDY13P-201ENST00000445813 1015 ntBASIC4.59□□□□□ -1.67
CDH13P55290 AC017067.1-201ENST00000448570 447 ntTSL 5 BASIC4.59□□□□□ -1.67
CDH13P55290 CDY23P-201ENST00000451661 1014 ntBASIC4.59□□□□□ -1.67
CDH13P55290 AC079168.2-201ENST00000453977 416 ntBASIC4.59□□□□□ -1.67
CDH13P55290 RPL37P3-201ENST00000456825 293 ntBASIC4.59□□□□□ -1.67
CDH13P55290 B4GALT4-AS1-201ENST00000470790 544 ntTSL 5 BASIC4.59□□□□□ -1.67
CDH13P55290 RPL23AP71-201ENST00000470966 469 ntBASIC4.59□□□□□ -1.67
CDH13P55290 RPS4XP6-201ENST00000477670 797 ntBASIC4.59□□□□□ -1.67
CDH13P55290 AC073359.2-201ENST00000478814 351 ntTSL 3 BASIC4.59□□□□□ -1.67
CDH13P55290 AC008696.2-201ENST00000503323 825 ntTSL 3 BASIC4.59□□□□□ -1.67
CDH13P55290 AC093801.2-201ENST00000503966 1050 ntBASIC4.59□□□□□ -1.67
CDH13P55290 ATP6V1G1P6-201ENST00000504007 334 ntBASIC4.59□□□□□ -1.67
CDH13P55290 AC006499.3-201ENST00000506077 748 ntBASIC4.59□□□□□ -1.67
CDH13P55290 AC024132.2-201ENST00000506878 482 ntTSL 3 BASIC4.59□□□□□ -1.67
CDH13P55290 COX6B1P6-201ENST00000522347 255 ntBASIC4.59□□□□□ -1.67
CDH13P55290 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC4.59□□□□□ -1.67
CDH13P55290 AP005436.3-201ENST00000532849 572 ntTSL 5 BASIC4.59□□□□□ -1.67
CDH13P55290 RAD51AP1-213ENST00000544927 787 ntTSL 4 BASIC4.59□□□□□ -1.67
CDH13P55290 AC012464.2-201ENST00000551257 779 ntTSL 5 BASIC4.59□□□□□ -1.67
CDH13P55290 PPFIA2-AS1-210ENST00000553197 875 ntTSL 5 BASIC4.59□□□□□ -1.67
CDH13P55290 CMC2-208ENST00000564249 890 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
CDH13P55290 AC090751.1-201ENST00000566966 267 ntBASIC4.59□□□□□ -1.67
CDH13P55290 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
CDH13P55290 AC090666.1-201ENST00000578241 445 ntBASIC4.59□□□□□ -1.67
CDH13P55290 AP002802.2-201ENST00000605877 235 ntBASIC4.59□□□□□ -1.67
CDH13P55290 AL008635.1-201ENST00000609073 385 ntTSL 3 BASIC4.59□□□□□ -1.67
CDH13P55290 AL669942.2-201ENST00000620352 697 ntBASIC4.59□□□□□ -1.67
CDH13P55290 AC015908.5-201ENST00000623289 343 ntBASIC4.59□□□□□ -1.67
CDH13P55290 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
CDH13P55290 OR2L1P-202ENST00000641567 1023 ntBASIC4.59□□□□□ -1.67
CDH13P55290 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.68
CDH13P55290 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC4.59□□□□□ -1.68
CDH13P55290 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC4.59□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 106.1 ms