Protein–RNA interactions for Protein: P53621

COPA, Coatomer subunit alpha, humanhuman

Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPAP53621 LINC02085-201ENST00000465215 2051 ntTSL 2 BASIC5.35□□□□□ -1.55
COPAP53621 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
COPAP53621 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC5.34□□□□□ -1.55
COPAP53621 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC5.34□□□□□ -1.55
COPAP53621 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
COPAP53621 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC5.34□□□□□ -1.55
COPAP53621 FOXN2-203ENST00000616844 1414 ntTSL 5 BASIC5.34□□□□□ -1.55
COPAP53621 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
COPAP53621 GLIPR1L1-201ENST00000312442 1132 ntAPPRIS P3 TSL 1 (best) BASIC5.34□□□□□ -1.55
COPAP53621 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
COPAP53621 RNU1-87P-201ENST00000363727 170 ntBASIC5.34□□□□□ -1.55
COPAP53621 RNU6-1242P-201ENST00000391052 103 ntBASIC5.34□□□□□ -1.55
COPAP53621 HSPA8P15-201ENST00000401676 786 ntBASIC5.34□□□□□ -1.55
COPAP53621 SNORA11C-201ENST00000408532 129 ntBASIC5.34□□□□□ -1.55
COPAP53621 PRR21-201ENST00000408934 1170 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
COPAP53621 CTSL3P-202ENST00000412179 788 ntBASIC5.34□□□□□ -1.55
COPAP53621 RPL12P9-201ENST00000412942 488 ntBASIC5.34□□□□□ -1.55
COPAP53621 HMGB1P49-201ENST00000418882 569 ntBASIC5.34□□□□□ -1.55
COPAP53621 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC5.34□□□□□ -1.55
COPAP53621 LINC01589-201ENST00000422971 548 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
COPAP53621 AL391832.1-201ENST00000423963 423 ntTSL 5 BASIC5.34□□□□□ -1.55
COPAP53621 IL23R-203ENST00000425614 1295 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
COPAP53621 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC5.34□□□□□ -1.55
COPAP53621 RAC1P8-201ENST00000427086 527 ntBASIC5.34□□□□□ -1.55
COPAP53621 RBMY2QP-201ENST00000429799 1147 ntBASIC5.34□□□□□ -1.55
COPAP53621 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC5.34□□□□□ -1.55
COPAP53621 HIGD1AP4-201ENST00000430194 280 ntBASIC5.34□□□□□ -1.55
COPAP53621 RPS24P8-201ENST00000431490 402 ntBASIC5.34□□□□□ -1.55
COPAP53621 FSIP2-AS1-202ENST00000436557 689 ntTSL 3 BASIC5.34□□□□□ -1.55
COPAP53621 AC015971.1-202ENST00000439077 514 ntTSL 3 BASIC5.34□□□□□ -1.55
COPAP53621 CLEC5A-203ENST00000439991 501 ntTSL 3 BASIC5.34□□□□□ -1.55
COPAP53621 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC5.34□□□□□ -1.55
COPAP53621 AC092647.3-201ENST00000443044 633 ntBASIC5.34□□□□□ -1.55
COPAP53621 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC5.34□□□□□ -1.55
COPAP53621 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC5.34□□□□□ -1.55
COPAP53621 RN7SL591P-201ENST00000496150 292 ntBASIC5.34□□□□□ -1.55
COPAP53621 RPS24P16-201ENST00000497294 392 ntBASIC5.34□□□□□ -1.55
COPAP53621 AC010406.1-201ENST00000507948 555 ntTSL 3 BASIC5.34□□□□□ -1.55
COPAP53621 GLRX-206ENST00000508780 533 ntAPPRIS P1 TSL 4 BASIC5.34□□□□□ -1.55
COPAP53621 RN7SKP147-201ENST00000517154 244 ntBASIC5.34□□□□□ -1.55
COPAP53621 AC093331.2-201ENST00000520459 677 ntTSL 3 BASIC5.34□□□□□ -1.55
COPAP53621 OR8A2P-201ENST00000528631 952 ntBASIC5.34□□□□□ -1.55
COPAP53621 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC5.34□□□□□ -1.55
COPAP53621 PDCD5P1-201ENST00000543528 309 ntBASIC5.34□□□□□ -1.55
COPAP53621 TMEM191C-213ENST00000545656 574 ntAPPRIS ALT2 BASIC5.34□□□□□ -1.55
COPAP53621 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC5.34□□□□□ -1.55
COPAP53621 AC011840.5-201ENST00000582125 771 ntBASIC5.34□□□□□ -1.55
COPAP53621 LINC01930-201ENST00000602672 870 ntTSL 5 BASIC5.34□□□□□ -1.55
COPAP53621 AC005252.1-201ENST00000604518 1063 ntBASIC5.34□□□□□ -1.55
COPAP53621 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC5.34□□□□□ -1.55
COPAP53621 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC5.34□□□□□ -1.55
COPAP53621 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC5.34□□□□□ -1.55
COPAP53621 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC5.34□□□□□ -1.55
COPAP53621 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
COPAP53621 AC138393.1-206ENST00000540997 1886 ntBASIC5.34□□□□□ -1.55
COPAP53621 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC5.34□□□□□ -1.55
COPAP53621 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.56
COPAP53621 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.56
COPAP53621 AL138820.1-201ENST00000617901 5305 ntBASIC5.33□□□□□ -1.56
COPAP53621 TANK-205ENST00000405852 2155 ntTSL 5 BASIC5.33□□□□□ -1.56
COPAP53621 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
COPAP53621 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.56
COPAP53621 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC5.33□□□□□ -1.56
COPAP53621 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC5.33□□□□□ -1.56
COPAP53621 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC5.33□□□□□ -1.56
COPAP53621 MTND4P8-201ENST00000514997 1362 ntBASIC5.33□□□□□ -1.56
COPAP53621 AC005261.4-201ENST00000600047 1385 ntBASIC5.33□□□□□ -1.56
COPAP53621 KMO-203ENST00000366558 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
COPAP53621 AC092747.4-201ENST00000620519 1861 ntBASIC5.33□□□□□ -1.56
COPAP53621 POPDC3-201ENST00000254765 1345 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
COPAP53621 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC5.33□□□□□ -1.56
COPAP53621 OR1L3-201ENST00000304820 1118 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
COPAP53621 AC011155.1-201ENST00000316512 456 ntBASIC5.33□□□□□ -1.56
COPAP53621 MAX-203ENST00000341653 330 ntTSL 2 BASIC5.33□□□□□ -1.56
COPAP53621 IKZF3-202ENST00000346243 1296 ntTSL 5 BASIC5.33□□□□□ -1.56
COPAP53621 RGS10-201ENST00000369101 738 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
COPAP53621 OR52E6-202ENST00000379946 954 ntBASIC5.33□□□□□ -1.56
COPAP53621 IL6-203ENST00000401651 539 ntTSL 2 BASIC5.33□□□□□ -1.56
COPAP53621 AC107081.1-201ENST00000414975 361 ntBASIC5.33□□□□□ -1.56
COPAP53621 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC5.33□□□□□ -1.56
COPAP53621 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC5.33□□□□□ -1.56
COPAP53621 AC019050.1-201ENST00000418508 492 ntBASIC5.33□□□□□ -1.56
COPAP53621 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC5.33□□□□□ -1.56
COPAP53621 DPH5-204ENST00000427040 609 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
COPAP53621 NANOGP2-201ENST00000435391 727 ntBASIC5.33□□□□□ -1.56
COPAP53621 AL031663.1-201ENST00000437445 219 ntBASIC5.33□□□□□ -1.56
COPAP53621 CBX1P4-201ENST00000439415 457 ntBASIC5.33□□□□□ -1.56
COPAP53621 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC5.33□□□□□ -1.56
COPAP53621 AC004022.1-201ENST00000447766 1066 ntBASIC5.33□□□□□ -1.56
COPAP53621 AL512328.1-202ENST00000452640 850 ntTSL 3 BASIC5.33□□□□□ -1.56
COPAP53621 HIGD1AP8-201ENST00000453927 274 ntBASIC5.33□□□□□ -1.56
COPAP53621 AC073522.1-201ENST00000483312 377 ntBASIC5.33□□□□□ -1.56
COPAP53621 AC107396.1-201ENST00000509641 735 ntTSL 5 BASIC5.33□□□□□ -1.56
COPAP53621 PGBD4P4-201ENST00000509673 613 ntBASIC5.33□□□□□ -1.56
COPAP53621 AC105999.2-201ENST00000521363 881 ntTSL 2 BASIC5.33□□□□□ -1.56
COPAP53621 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC5.33□□□□□ -1.56
COPAP53621 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC5.33□□□□□ -1.56
COPAP53621 AP001922.4-201ENST00000526967 290 ntBASIC5.33□□□□□ -1.56
COPAP53621 OR5AZ1P-201ENST00000527448 943 ntBASIC5.33□□□□□ -1.56
COPAP53621 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC5.33□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 113.5 ms