Protein–RNA interactions for Protein: P52948

NUP98, Nuclear pore complex protein Nup98-Nup96, humanhuman

Predictions only

Length 1,817 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98P52948 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC4.94□□□□□ -1.62
NUP98P52948 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
NUP98P52948 AL049781.1-201ENST00000623195 3585 ntBASIC4.94□□□□□ -1.62
NUP98P52948 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC4.94□□□□□ -1.62
NUP98P52948 CLK1-203ENST00000409769 1192 ntTSL 2 BASIC4.94□□□□□ -1.62
NUP98P52948 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC4.94□□□□□ -1.62
NUP98P52948 AL050321.1-201ENST00000432363 400 ntBASIC4.94□□□□□ -1.62
NUP98P52948 ARL4AP4-201ENST00000434170 518 ntBASIC4.94□□□□□ -1.62
NUP98P52948 PRSS3P4-201ENST00000453323 162 ntBASIC4.94□□□□□ -1.62
NUP98P52948 LINC00377-201ENST00000456588 657 ntTSL 5 BASIC4.94□□□□□ -1.62
NUP98P52948 AC092832.2-201ENST00000456621 389 ntTSL 2 BASIC4.94□□□□□ -1.62
NUP98P52948 LINC02483-201ENST00000512043 1143 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
NUP98P52948 RN7SKP157-201ENST00000516174 282 ntBASIC4.94□□□□□ -1.62
NUP98P52948 AP003472.1-201ENST00000519844 644 ntTSL 3 BASIC4.94□□□□□ -1.62
NUP98P52948 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC4.94□□□□□ -1.62
NUP98P52948 AC007298.1-201ENST00000547346 656 ntTSL 3 BASIC4.94□□□□□ -1.62
NUP98P52948 AC027287.2-201ENST00000547559 592 ntTSL 4 BASIC4.94□□□□□ -1.62
NUP98P52948 AC009558.2-201ENST00000558258 396 ntTSL 2 BASIC4.94□□□□□ -1.62
NUP98P52948 AC025627.2-201ENST00000576220 160 ntBASIC4.94□□□□□ -1.62
NUP98P52948 RN7SL371P-201ENST00000578099 267 ntBASIC4.94□□□□□ -1.62
NUP98P52948 AC016839.1-201ENST00000578162 867 ntBASIC4.94□□□□□ -1.62
NUP98P52948 AC017100.2-201ENST00000584628 355 ntBASIC4.94□□□□□ -1.62
NUP98P52948 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC4.94□□□□□ -1.62
NUP98P52948 AL031656.1-202ENST00000457704 1995 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
NUP98P52948 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC4.94□□□□□ -1.62
NUP98P52948 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
NUP98P52948 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC4.94□□□□□ -1.62
NUP98P52948 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
NUP98P52948 PSMC6-218ENST00000606149 1560 ntAPPRIS ALT1 TSL 1 (best) BASIC4.94□□□□□ -1.62
NUP98P52948 ZBTB8A-202ENST00000373510 7075 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
NUP98P52948 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC4.94□□□□□ -1.62
NUP98P52948 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC4.93□□□□□ -1.62
NUP98P52948 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC4.93□□□□□ -1.62
NUP98P52948 AL672167.2-201ENST00000377164 879 ntBASIC4.93□□□□□ -1.62
NUP98P52948 RANP8-201ENST00000444720 713 ntBASIC4.93□□□□□ -1.62
NUP98P52948 AC009495.2-201ENST00000457108 506 ntTSL 2 BASIC4.93□□□□□ -1.62
NUP98P52948 CREM-220ENST00000463314 964 ntTSL 2 BASIC4.93□□□□□ -1.62
NUP98P52948 DUXAP2-201ENST00000519198 589 ntBASIC4.93□□□□□ -1.62
NUP98P52948 PCAT1-201ENST00000519319 734 ntTSL 2 BASIC4.93□□□□□ -1.62
NUP98P52948 MTND1P6-201ENST00000523621 946 ntBASIC4.93□□□□□ -1.62
NUP98P52948 LINC02422-201ENST00000535163 852 ntTSL 3 BASIC4.93□□□□□ -1.62
NUP98P52948 HSPE1P5-201ENST00000561489 272 ntBASIC4.93□□□□□ -1.62
NUP98P52948 MIR7154-201ENST00000620673 73 ntBASIC4.93□□□□□ -1.62
NUP98P52948 AC124312.6-202ENST00000623624 418 ntBASIC4.93□□□□□ -1.62
NUP98P52948 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC4.93□□□□□ -1.62
NUP98P52948 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC4.93□□□□□ -1.62
NUP98P52948 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
NUP98P52948 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
NUP98P52948 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
NUP98P52948 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC4.93□□□□□ -1.62
NUP98P52948 KIN-201ENST00000379562 6348 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
NUP98P52948 AP002001.2-201ENST00000529025 1469 ntBASIC4.93□□□□□ -1.62
NUP98P52948 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
NUP98P52948 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC4.93□□□□□ -1.62
NUP98P52948 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
NUP98P52948 GRAMD2B-210ENST00000511134 1577 ntTSL 2 BASIC4.93□□□□□ -1.62
NUP98P52948 LINC00161-201ENST00000412526 870 ntTSL 2 BASIC4.93□□□□□ -1.62
NUP98P52948 AC062031.1-201ENST00000414967 747 ntTSL 3 BASIC4.93□□□□□ -1.62
NUP98P52948 DYNLL1P7-201ENST00000429273 258 ntBASIC4.93□□□□□ -1.62
NUP98P52948 CYCSP53-201ENST00000455540 265 ntBASIC4.93□□□□□ -1.62
NUP98P52948 LINC02000-201ENST00000483245 640 ntTSL 2 BASIC4.93□□□□□ -1.62
NUP98P52948 MORF4L2P1-201ENST00000503761 858 ntBASIC4.93□□□□□ -1.62
NUP98P52948 AC016573.1-201ENST00000523205 539 ntTSL 3 BASIC4.93□□□□□ -1.62
NUP98P52948 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC4.93□□□□□ -1.62
NUP98P52948 AC026979.4-201ENST00000606555 645 ntBASIC4.93□□□□□ -1.62
NUP98P52948 AL391497.1-201ENST00000608671 547 ntBASIC4.93□□□□□ -1.62
NUP98P52948 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC4.93□□□□□ -1.62
NUP98P52948 EPS8-207ENST00000540613 2204 ntTSL 2 BASIC4.92□□□□□ -1.62
NUP98P52948 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC4.92□□□□□ -1.62
NUP98P52948 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
NUP98P52948 CASC19-284ENST00000642142 1868 ntBASIC4.92□□□□□ -1.62
NUP98P52948 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
NUP98P52948 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC4.92□□□□□ -1.62
NUP98P52948 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC4.92□□□□□ -1.62
NUP98P52948 SOD2P1-201ENST00000396543 562 ntBASIC4.92□□□□□ -1.62
NUP98P52948 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC4.92□□□□□ -1.62
NUP98P52948 HIGD1AP4-201ENST00000430194 280 ntBASIC4.92□□□□□ -1.62
NUP98P52948 LINC02013-201ENST00000438156 526 ntTSL 2 BASIC4.92□□□□□ -1.62
NUP98P52948 RPS3AP46-201ENST00000448352 682 ntBASIC4.92□□□□□ -1.62
NUP98P52948 AL139350.1-201ENST00000448825 408 ntTSL 3 BASIC4.92□□□□□ -1.62
NUP98P52948 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC4.92□□□□□ -1.62
NUP98P52948 AC007599.1-201ENST00000568688 1174 ntBASIC4.92□□□□□ -1.62
NUP98P52948 FP236241.1-201ENST00000623374 7632 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
NUP98P52948 CU633967.1-211ENST00000624444 7628 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
NUP98P52948 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
NUP98P52948 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
NUP98P52948 SLC7A11-201ENST00000280612 9645 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
NUP98P52948 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
NUP98P52948 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
NUP98P52948 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC4.91□□□□□ -1.62
NUP98P52948 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
NUP98P52948 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
NUP98P52948 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
NUP98P52948 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC4.91□□□□□ -1.62
NUP98P52948 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
NUP98P52948 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
NUP98P52948 TRIM60P17-201ENST00000415181 719 ntBASIC4.91□□□□□ -1.62
NUP98P52948 AC007688.1-201ENST00000475592 759 ntBASIC4.91□□□□□ -1.62
NUP98P52948 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC4.91□□□□□ -1.62
NUP98P52948 UBE2CP3-201ENST00000502715 450 ntBASIC4.91□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 122.6 ms