Protein–RNA interactions for Protein: P51956

NEK3, Serine/threonine-protein kinase Nek3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3P51956 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
NEK3P51956 AL359535.1-201ENST00000612100 1087 ntBASIC5.41□□□□□ -1.54
NEK3P51956 AL121612.2-201ENST00000612261 482 ntBASIC5.41□□□□□ -1.54
NEK3P51956 AC024257.5-201ENST00000612739 531 ntBASIC5.41□□□□□ -1.54
NEK3P51956 MIR6839-201ENST00000620425 113 ntBASIC5.41□□□□□ -1.54
NEK3P51956 AP002505.2-201ENST00000623585 696 ntBASIC5.41□□□□□ -1.54
NEK3P51956 AL512506.2-201ENST00000624472 458 ntBASIC5.41□□□□□ -1.54
NEK3P51956 CU634019.2-201ENST00000625184 593 ntTSL 3 BASIC5.41□□□□□ -1.54
NEK3P51956 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC5.41□□□□□ -1.54
NEK3P51956 CYP4F35P-202ENST00000636121 390 ntBASIC5.41□□□□□ -1.54
NEK3P51956 OR6C3-203ENST00000641740 1093 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
NEK3P51956 AP005901.5-201ENST00000545779 1796 ntBASIC5.41□□□□□ -1.54
NEK3P51956 AC107081.3-201ENST00000612715 2034 ntBASIC5.41□□□□□ -1.54
NEK3P51956 OR1E1-201ENST00000322608 1307 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
NEK3P51956 ODAM-201ENST00000396094 1319 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
NEK3P51956 AC109780.1-201ENST00000451768 1344 ntBASIC5.41□□□□□ -1.54
NEK3P51956 AL031595.2-201ENST00000624215 19071 ntBASIC5.41□□□□□ -1.54
NEK3P51956 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC5.41□□□□□ -1.54
NEK3P51956 AC011493.1-201ENST00000596753 1632 ntBASIC5.41□□□□□ -1.54
NEK3P51956 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC5.41□□□□□ -1.54
NEK3P51956 CYP4Z1-201ENST00000334194 1906 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
NEK3P51956 CFH-206ENST00000630130 1658 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
NEK3P51956 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC5.4□□□□□ -1.54
NEK3P51956 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
NEK3P51956 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
NEK3P51956 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
NEK3P51956 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
NEK3P51956 AL162425.1-201ENST00000423637 1525 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
NEK3P51956 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
NEK3P51956 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
NEK3P51956 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
NEK3P51956 IL5-201ENST00000231454 816 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
NEK3P51956 OR9G4-201ENST00000302957 984 ntBASIC5.4□□□□□ -1.54
NEK3P51956 GSTA1-201ENST00000334575 1019 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
NEK3P51956 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC5.4□□□□□ -1.54
NEK3P51956 U3.2-201ENST00000362981 210 ntBASIC5.4□□□□□ -1.54
NEK3P51956 RNA5SP223-201ENST00000365174 120 ntBASIC5.4□□□□□ -1.54
NEK3P51956 BMS1P3-201ENST00000372011 932 ntBASIC5.4□□□□□ -1.54
NEK3P51956 EIF1AY-202ENST00000382772 746 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
NEK3P51956 MIR217-201ENST00000384817 110 ntBASIC5.4□□□□□ -1.54
NEK3P51956 MRM2-202ENST00000407040 582 ntTSL 3 BASIC5.4□□□□□ -1.54
NEK3P51956 LINC02263-202ENST00000420701 597 ntTSL 5 BASIC5.4□□□□□ -1.54
NEK3P51956 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC5.4□□□□□ -1.54
NEK3P51956 AC007435.1-201ENST00000421086 415 ntBASIC5.4□□□□□ -1.54
NEK3P51956 Z93242.1-201ENST00000427102 353 ntBASIC5.4□□□□□ -1.54
NEK3P51956 AL513175.1-201ENST00000431492 780 ntBASIC5.4□□□□□ -1.54
NEK3P51956 AL161457.1-201ENST00000434656 905 ntTSL 5 BASIC5.4□□□□□ -1.54
NEK3P51956 MTND6P18-201ENST00000439477 513 ntBASIC5.4□□□□□ -1.54
NEK3P51956 AC092393.1-201ENST00000439625 742 ntBASIC5.4□□□□□ -1.54
NEK3P51956 CR769776.1-201ENST00000441254 787 ntBASIC5.4□□□□□ -1.54
NEK3P51956 RAB11AP1-201ENST00000442978 646 ntBASIC5.4□□□□□ -1.54
NEK3P51956 EEF1B2P5-201ENST00000444820 548 ntBASIC5.4□□□□□ -1.54
NEK3P51956 AL139121.1-201ENST00000445647 244 ntTSL 2 BASIC5.4□□□□□ -1.54
NEK3P51956 AC012512.1-201ENST00000446594 718 ntBASIC5.4□□□□□ -1.54
NEK3P51956 Z73417.1-201ENST00000447373 778 ntBASIC5.4□□□□□ -1.54
NEK3P51956 AC079776.3-201ENST00000450665 370 ntBASIC5.4□□□□□ -1.54
NEK3P51956 IFNWP4-201ENST00000453148 294 ntBASIC5.4□□□□□ -1.54
NEK3P51956 RN7SL515P-201ENST00000463999 297 ntBASIC5.4□□□□□ -1.54
NEK3P51956 AP000893.1-201ENST00000474462 794 ntBASIC5.4□□□□□ -1.54
NEK3P51956 RPS24P16-201ENST00000497294 392 ntBASIC5.4□□□□□ -1.54
NEK3P51956 LINC01030-201ENST00000517505 738 ntTSL 3 BASIC5.4□□□□□ -1.54
NEK3P51956 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC5.4□□□□□ -1.54
NEK3P51956 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC5.4□□□□□ -1.54
NEK3P51956 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC5.4□□□□□ -1.54
NEK3P51956 MIR4307HG-201ENST00000548170 822 ntTSL 3 BASIC5.4□□□□□ -1.54
NEK3P51956 AC116553.2-201ENST00000564203 463 ntBASIC5.4□□□□□ -1.54
NEK3P51956 MIR4472-2-201ENST00000582069 67 ntBASIC5.4□□□□□ -1.54
NEK3P51956 RN7SL356P-201ENST00000582228 248 ntBASIC5.4□□□□□ -1.54
NEK3P51956 ZNF682-204ENST00000593468 581 ntTSL 4 BASIC5.4□□□□□ -1.54
NEK3P51956 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
NEK3P51956 AC006963.1-201ENST00000624003 1052 ntBASIC5.4□□□□□ -1.54
NEK3P51956 AC068620.4-201ENST00000636730 1182 ntBASIC5.4□□□□□ -1.54
NEK3P51956 AC097495.1-201ENST00000637675 546 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
NEK3P51956 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC5.4□□□□□ -1.55
NEK3P51956 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC5.4□□□□□ -1.55
NEK3P51956 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC5.4□□□□□ -1.55
NEK3P51956 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
NEK3P51956 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
NEK3P51956 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
NEK3P51956 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC5.39□□□□□ -1.55
NEK3P51956 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
NEK3P51956 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC5.39□□□□□ -1.55
NEK3P51956 ERCC6-202ENST00000374127 1782 ntBASIC5.39□□□□□ -1.55
NEK3P51956 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
NEK3P51956 AC114947.2-201ENST00000565748 2125 ntBASIC5.39□□□□□ -1.55
NEK3P51956 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
NEK3P51956 AL161911.1-202ENST00000464488 1534 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
NEK3P51956 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
NEK3P51956 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC5.39□□□□□ -1.55
NEK3P51956 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC5.39□□□□□ -1.55
NEK3P51956 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC5.39□□□□□ -1.55
NEK3P51956 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
NEK3P51956 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC5.39□□□□□ -1.55
NEK3P51956 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
NEK3P51956 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC5.39□□□□□ -1.55
NEK3P51956 AMELX-202ENST00000380712 835 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
NEK3P51956 AMELX-203ENST00000380714 793 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
NEK3P51956 RNU6-444P-201ENST00000383988 108 ntBASIC5.39□□□□□ -1.55
NEK3P51956 HSPA8P15-201ENST00000401676 786 ntBASIC5.39□□□□□ -1.55
NEK3P51956 OR4K12P-201ENST00000406538 961 ntBASIC5.39□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 99.7 ms