Protein–RNA interactions for Protein: P49238

CX3CR1, CX3C chemokine receptor 1, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1P49238 AC006504.5-212ENST00000587188 746 ntTSL 3 BASIC3.9□□□□□ -1.79
CX3CR1P49238 MIMT1-201ENST00000597105 1050 ntBASIC3.9□□□□□ -1.79
CX3CR1P49238 Z98200.1-201ENST00000607298 470 ntBASIC3.9□□□□□ -1.79
CX3CR1P49238 FAM25E-202ENST00000608562 189 ntBASIC3.9□□□□□ -1.79
CX3CR1P49238 AL096803.3-201ENST00000609032 532 ntBASIC3.9□□□□□ -1.79
CX3CR1P49238 AC084036.1-201ENST00000609190 508 ntBASIC3.9□□□□□ -1.79
CX3CR1P49238 PRKCQ-AS1-218ENST00000624974 1132 ntTSL 5 BASIC3.9□□□□□ -1.79
CX3CR1P49238 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
CX3CR1P49238 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
CX3CR1P49238 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC3.9□□□□□ -1.79
CX3CR1P49238 CCPG1-202ENST00000425574 1945 ntTSL 2 BASIC3.89□□□□□ -1.79
CX3CR1P49238 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
CX3CR1P49238 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC3.89□□□□□ -1.79
CX3CR1P49238 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC3.89□□□□□ -1.79
CX3CR1P49238 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
CX3CR1P49238 AL133243.3-201ENST00000617415 3004 ntBASIC3.89□□□□□ -1.79
CX3CR1P49238 AC067945.1-201ENST00000342609 618 ntBASIC3.89□□□□□ -1.79
CX3CR1P49238 RNU6-984P-201ENST00000363236 109 ntBASIC3.89□□□□□ -1.79
CX3CR1P49238 MIR659-201ENST00000384963 97 ntBASIC3.89□□□□□ -1.79
CX3CR1P49238 RNU6ATAC5P-201ENST00000388104 126 ntBASIC3.89□□□□□ -1.79
CX3CR1P49238 RNA5SP397-201ENST00000391323 118 ntBASIC3.89□□□□□ -1.79
CX3CR1P49238 CEBPZOS-205ENST00000406711 687 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
CX3CR1P49238 VN1R8P-201ENST00000407739 893 ntBASIC3.89□□□□□ -1.79
CX3CR1P49238 RPS20P14-201ENST00000412545 360 ntBASIC3.89□□□□□ -1.79
CX3CR1P49238 AC079630.1-201ENST00000412812 585 ntTSL 4 BASIC3.89□□□□□ -1.79
CX3CR1P49238 MTOR-AS1-202ENST00000445982 705 ntTSL 5 BASIC3.89□□□□□ -1.79
CX3CR1P49238 RPL23AP43-201ENST00000446445 471 ntBASIC3.89□□□□□ -1.79
CX3CR1P49238 RPL7P31-201ENST00000450192 724 ntBASIC3.89□□□□□ -1.79
CX3CR1P49238 FGF7P3-201ENST00000454645 303 ntBASIC3.89□□□□□ -1.79
CX3CR1P49238 RNU6ATAC28P-201ENST00000459249 118 ntBASIC3.89□□□□□ -1.79
CX3CR1P49238 OR52A4P-201ENST00000472867 958 ntBASIC3.89□□□□□ -1.79
CX3CR1P49238 AC093270.2-201ENST00000486157 792 ntBASIC3.89□□□□□ -1.79
CX3CR1P49238 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC3.89□□□□□ -1.79
CX3CR1P49238 AC084871.1-201ENST00000508020 628 ntTSL 3 BASIC3.89□□□□□ -1.79
CX3CR1P49238 AC097460.1-204ENST00000515026 764 ntTSL 5 BASIC3.89□□□□□ -1.79
CX3CR1P49238 AC079209.1-201ENST00000519412 820 ntTSL 3 BASIC3.89□□□□□ -1.79
CX3CR1P49238 IGKV2D-10-201ENST00000520194 281 ntBASIC3.89□□□□□ -1.79
CX3CR1P49238 OSGEPL1-AS1-203ENST00000523895 567 ntTSL 4 BASIC3.89□□□□□ -1.79
CX3CR1P49238 AP001781.1-201ENST00000530977 207 ntBASIC3.89□□□□□ -1.79
CX3CR1P49238 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC3.89□□□□□ -1.79
CX3CR1P49238 GPATCH2L-203ENST00000553588 776 ntTSL 2 BASIC3.89□□□□□ -1.79
CX3CR1P49238 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC3.89□□□□□ -1.79
CX3CR1P49238 AC021549.1-201ENST00000580937 433 ntTSL 3 BASIC3.89□□□□□ -1.79
CX3CR1P49238 DAB1-AS1-208ENST00000586465 748 ntTSL 5 BASIC3.89□□□□□ -1.79
CX3CR1P49238 AL109935.2-201ENST00000587737 395 ntTSL 5 BASIC3.89□□□□□ -1.79
CX3CR1P49238 AC020634.1-201ENST00000608701 549 ntBASIC3.89□□□□□ -1.79
CX3CR1P49238 AL133243.1-201ENST00000614487 366 ntBASIC3.89□□□□□ -1.79
CX3CR1P49238 AC015726.3-201ENST00000624501 418 ntBASIC3.89□□□□□ -1.79
CX3CR1P49238 AC006065.6-201ENST00000625201 545 ntBASIC3.89□□□□□ -1.79
CX3CR1P49238 SMARCA2-231ENST00000634931 939 ntTSL 5 BASIC3.89□□□□□ -1.79
CX3CR1P49238 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC3.89□□□□□ -1.79
CX3CR1P49238 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC3.89□□□□□ -1.79
CX3CR1P49238 OR52N4-202ENST00000641350 1276 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
CX3CR1P49238 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC3.89□□□□□ -1.79
CX3CR1P49238 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
CX3CR1P49238 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC3.89□□□□□ -1.79
CX3CR1P49238 MFSD8-242ENST00000641690 4199 ntBASIC3.89□□□□□ -1.79
CX3CR1P49238 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC3.89□□□□□ -1.79
CX3CR1P49238 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
CX3CR1P49238 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
CX3CR1P49238 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC3.89□□□□□ -1.79
CX3CR1P49238 BAALC-AS1-201ENST00000499522 1353 ntTSL 5 BASIC3.89□□□□□ -1.79
CX3CR1P49238 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC3.88□□□□□ -1.79
CX3CR1P49238 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
CX3CR1P49238 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
CX3CR1P49238 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC3.88□□□□□ -1.79
CX3CR1P49238 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
CX3CR1P49238 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
CX3CR1P49238 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC3.88□□□□□ -1.79
CX3CR1P49238 SNORD74.4-201ENST00000364129 80 ntBASIC3.88□□□□□ -1.79
CX3CR1P49238 RNU6-1279P-201ENST00000383917 103 ntBASIC3.88□□□□□ -1.79
CX3CR1P49238 SNORA74C-2-201ENST00000411179 201 ntBASIC3.88□□□□□ -1.79
CX3CR1P49238 AL691447.1-201ENST00000419456 387 ntBASIC3.88□□□□□ -1.79
CX3CR1P49238 LINC02020-202ENST00000421006 575 ntTSL 4 BASIC3.88□□□□□ -1.79
CX3CR1P49238 AL590762.4-201ENST00000425885 253 ntBASIC3.88□□□□□ -1.79
CX3CR1P49238 AC006455.6-201ENST00000426192 893 ntBASIC3.88□□□□□ -1.79
CX3CR1P49238 AC073335.1-201ENST00000427776 363 ntBASIC3.88□□□□□ -1.79
CX3CR1P49238 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC3.88□□□□□ -1.79
CX3CR1P49238 AL360081.1-201ENST00000428299 555 ntBASIC3.88□□□□□ -1.79
CX3CR1P49238 AP001324.1-201ENST00000428553 399 ntBASIC3.88□□□□□ -1.79
CX3CR1P49238 BX119904.1-201ENST00000432026 348 ntBASIC3.88□□□□□ -1.79
CX3CR1P49238 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC3.88□□□□□ -1.79
CX3CR1P49238 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC3.88□□□□□ -1.79
CX3CR1P49238 RPL36AP15-201ENST00000444514 266 ntBASIC3.88□□□□□ -1.79
CX3CR1P49238 AC099677.4-201ENST00000446786 380 ntTSL 3 BASIC3.88□□□□□ -1.79
CX3CR1P49238 AL162388.1-201ENST00000450912 352 ntBASIC3.88□□□□□ -1.79
CX3CR1P49238 AC010149.1-201ENST00000455357 571 ntTSL 4 BASIC3.88□□□□□ -1.79
CX3CR1P49238 AC010683.1-201ENST00000473673 378 ntBASIC3.88□□□□□ -1.79
CX3CR1P49238 RPL32P9-201ENST00000487963 407 ntBASIC3.88□□□□□ -1.79
CX3CR1P49238 HMGB3P13-201ENST00000511263 607 ntBASIC3.88□□□□□ -1.79
CX3CR1P49238 RNU6-551P-201ENST00000516661 103 ntBASIC3.88□□□□□ -1.79
CX3CR1P49238 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC3.88□□□□□ -1.79
CX3CR1P49238 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC3.88□□□□□ -1.79
CX3CR1P49238 IFITM8P-201ENST00000522529 394 ntBASIC3.88□□□□□ -1.79
CX3CR1P49238 DEFB109D-201ENST00000529497 240 ntBASIC3.88□□□□□ -1.79
CX3CR1P49238 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC3.88□□□□□ -1.79
CX3CR1P49238 AC091073.1-201ENST00000559620 666 ntTSL 3 BASIC3.88□□□□□ -1.79
CX3CR1P49238 CYP4A43P-201ENST00000568156 121 ntBASIC3.88□□□□□ -1.79
CX3CR1P49238 MIR4270-201ENST00000581799 70 ntBASIC3.88□□□□□ -1.79
CX3CR1P49238 AC090844.2-203ENST00000582263 632 ntTSL 5 BASIC3.88□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 83.6 ms