Protein–RNA interactions for Protein: P48431

SOX2, Transcription factor SOX-2, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2P48431 AL121852.1-201ENST00000554665 430 ntTSL 3 BASIC4.65□□□□□ -1.67
SOX2P48431 AC104938.1-202ENST00000563041 630 ntTSL 3 BASIC4.65□□□□□ -1.67
SOX2P48431 LINC01904-201ENST00000564872 861 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
SOX2P48431 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC4.65□□□□□ -1.67
SOX2P48431 AC010547.3-201ENST00000569271 440 ntTSL 2 BASIC4.65□□□□□ -1.67
SOX2P48431 MIR4675-201ENST00000577898 77 ntBASIC4.65□□□□□ -1.67
SOX2P48431 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC4.65□□□□□ -1.67
SOX2P48431 OR4K7P-201ENST00000580232 945 ntBASIC4.65□□□□□ -1.67
SOX2P48431 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC4.65□□□□□ -1.67
SOX2P48431 AC025278.1-201ENST00000593558 515 ntTSL 2 BASIC4.65□□□□□ -1.67
SOX2P48431 SATB1-AS1-222ENST00000600177 751 ntTSL 5 BASIC4.65□□□□□ -1.67
SOX2P48431 AC012616.1-201ENST00000600294 197 ntBASIC4.65□□□□□ -1.67
SOX2P48431 NTAN1P1-201ENST00000603150 646 ntBASIC4.65□□□□□ -1.67
SOX2P48431 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC4.65□□□□□ -1.67
SOX2P48431 AP004247.3-201ENST00000608682 624 ntBASIC4.65□□□□□ -1.67
SOX2P48431 AC097505.1-201ENST00000610199 565 ntBASIC4.65□□□□□ -1.67
SOX2P48431 HULC.1-201ENST00000612720 240 ntBASIC4.65□□□□□ -1.67
SOX2P48431 AL118522.2-201ENST00000616045 615 ntBASIC4.65□□□□□ -1.67
SOX2P48431 AL121890.2-201ENST00000617644 465 ntBASIC4.65□□□□□ -1.67
SOX2P48431 AC069209.1-201ENST00000619282 651 ntBASIC4.65□□□□□ -1.67
SOX2P48431 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC4.65□□□□□ -1.67
SOX2P48431 AF246928.1-201ENST00000623768 87 ntBASIC4.65□□□□□ -1.67
SOX2P48431 AP003072.4-201ENST00000624580 310 ntBASIC4.65□□□□□ -1.67
SOX2P48431 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC4.65□□□□□ -1.67
SOX2P48431 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC4.65□□□□□ -1.67
SOX2P48431 LEUTX-202ENST00000638280 667 ntAPPRIS P1 TSL 3 BASIC4.65□□□□□ -1.67
SOX2P48431 PRKCH-228ENST00000640011 285 ntTSL 5 BASIC4.65□□□□□ -1.67
SOX2P48431 SAMMSON-227ENST00000642114 1199 ntBASIC4.65□□□□□ -1.67
SOX2P48431 AL603750.1-201ENST00000624216 1717 ntBASIC4.65□□□□□ -1.67
SOX2P48431 LINC01619-203ENST00000549802 2169 ntTSL 2 BASIC4.65□□□□□ -1.67
SOX2P48431 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC4.65□□□□□ -1.67
SOX2P48431 OR2AP1-202ENST00000641114 1548 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
SOX2P48431 PCAT14-202ENST00000627127 3935 ntBASIC4.65□□□□□ -1.67
SOX2P48431 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.67
SOX2P48431 AC109315.1-201ENST00000584143 1347 ntBASIC4.65□□□□□ -1.67
SOX2P48431 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC4.65□□□□□ -1.67
SOX2P48431 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
SOX2P48431 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.67
SOX2P48431 THAP12P5-201ENST00000405864 2275 ntBASIC4.65□□□□□ -1.67
SOX2P48431 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
SOX2P48431 SCAMP1-206ENST00000618166 1358 ntTSL 2 BASIC4.65□□□□□ -1.67
SOX2P48431 AC096656.1-201ENST00000623826 1364 ntBASIC4.65□□□□□ -1.67
SOX2P48431 MECOM-217ENST00000494292 3939 ntAPPRIS ALT2 TSL 5 BASIC4.65□□□□□ -1.67
SOX2P48431 CLEC1A-204ENST00000457018 1686 ntAPPRIS ALT2 TSL 2 BASIC4.64□□□□□ -1.67
SOX2P48431 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC4.64□□□□□ -1.67
SOX2P48431 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC4.64□□□□□ -1.67
SOX2P48431 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC4.64□□□□□ -1.67
SOX2P48431 AC087359.1-201ENST00000508335 1740 ntBASIC4.64□□□□□ -1.67
SOX2P48431 AP000542.2-201ENST00000623199 6179 ntBASIC4.64□□□□□ -1.67
SOX2P48431 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC4.64□□□□□ -1.67
SOX2P48431 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC4.64□□□□□ -1.67
SOX2P48431 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
SOX2P48431 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
SOX2P48431 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
SOX2P48431 RNU6-931P-201ENST00000363850 107 ntBASIC4.64□□□□□ -1.67
SOX2P48431 RNA5SP223-201ENST00000365174 120 ntBASIC4.64□□□□□ -1.67
SOX2P48431 CENPW-203ENST00000368328 750 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
SOX2P48431 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
SOX2P48431 FETUB-203ENST00000382136 1040 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
SOX2P48431 RNU6-1200P-201ENST00000384162 107 ntBASIC4.64□□□□□ -1.67
SOX2P48431 VDAC2P1-201ENST00000399358 958 ntBASIC4.64□□□□□ -1.67
SOX2P48431 GAPDHP42-201ENST00000406848 981 ntBASIC4.64□□□□□ -1.67
SOX2P48431 RPS3AP2-201ENST00000407190 754 ntBASIC4.64□□□□□ -1.67
SOX2P48431 AL161449.1-201ENST00000414531 1199 ntBASIC4.64□□□□□ -1.67
SOX2P48431 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC4.64□□□□□ -1.67
SOX2P48431 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC4.64□□□□□ -1.67
SOX2P48431 AC019050.1-201ENST00000418508 492 ntBASIC4.64□□□□□ -1.67
SOX2P48431 LINC01589-201ENST00000422971 548 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
SOX2P48431 AC019178.2-201ENST00000423595 505 ntBASIC4.64□□□□□ -1.67
SOX2P48431 AL662874.1-201ENST00000426065 230 ntBASIC4.64□□□□□ -1.67
SOX2P48431 RPP40P1-201ENST00000426762 456 ntBASIC4.64□□□□□ -1.67
SOX2P48431 LINC00266-4P-201ENST00000427373 842 ntTSL 3 BASIC4.64□□□□□ -1.67
SOX2P48431 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC4.64□□□□□ -1.67
SOX2P48431 ALG13-AS1-201ENST00000430794 195 ntTSL 5 BASIC4.64□□□□□ -1.67
SOX2P48431 LINC00595-203ENST00000432742 683 ntTSL 3 BASIC4.64□□□□□ -1.67
SOX2P48431 GSTM5P1-201ENST00000434751 660 ntBASIC4.64□□□□□ -1.67
SOX2P48431 AC092162.2-201ENST00000438143 532 ntTSL 4 BASIC4.64□□□□□ -1.67
SOX2P48431 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC4.64□□□□□ -1.67
SOX2P48431 AL591623.2-201ENST00000449978 222 ntBASIC4.64□□□□□ -1.67
SOX2P48431 YRDCP3-201ENST00000456507 480 ntBASIC4.64□□□□□ -1.67
SOX2P48431 AC108161.1-201ENST00000461060 402 ntBASIC4.64□□□□□ -1.67
SOX2P48431 MTND1P16-201ENST00000465177 898 ntBASIC4.64□□□□□ -1.67
SOX2P48431 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
SOX2P48431 SELENOT-204ENST00000480740 783 ntTSL 3 BASIC4.64□□□□□ -1.67
SOX2P48431 AK6-203ENST00000502819 743 ntTSL 5 BASIC4.64□□□□□ -1.67
SOX2P48431 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC4.64□□□□□ -1.67
SOX2P48431 TCP11X3P-202ENST00000514289 1254 ntBASIC4.64□□□□□ -1.67
SOX2P48431 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC4.64□□□□□ -1.67
SOX2P48431 RN7SKP183-201ENST00000517169 324 ntBASIC4.64□□□□□ -1.67
SOX2P48431 RN7SKP283-201ENST00000517197 270 ntBASIC4.64□□□□□ -1.67
SOX2P48431 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
SOX2P48431 NAP1L1P1-201ENST00000524793 1063 ntBASIC4.64□□□□□ -1.67
SOX2P48431 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
SOX2P48431 AP000873.2-204ENST00000530825 375 ntTSL 3 BASIC4.64□□□□□ -1.67
SOX2P48431 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC4.64□□□□□ -1.67
SOX2P48431 NANOGNBP2-201ENST00000544753 553 ntBASIC4.64□□□□□ -1.67
SOX2P48431 TMEM191C-213ENST00000545656 574 ntAPPRIS ALT2 BASIC4.64□□□□□ -1.67
SOX2P48431 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC4.64□□□□□ -1.67
SOX2P48431 AC026826.3-201ENST00000561747 158 ntBASIC4.64□□□□□ -1.67
SOX2P48431 AC026462.4-202ENST00000564331 532 ntTSL 3 BASIC4.64□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 96.1 ms