Protein–RNA interactions for Protein: P41273

TNFSF9, Tumor necrosis factor ligand superfamily member 9, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF9P41273 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
TNFSF9P41273 HSPA8P17-201ENST00000427029 1382 ntBASIC4.5□□□□□ -1.69
TNFSF9P41273 Z95327.2-201ENST00000414579 1873 ntBASIC4.49□□□□□ -1.69
TNFSF9P41273 DDX18P4-201ENST00000511690 1966 ntBASIC4.49□□□□□ -1.69
TNFSF9P41273 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
TNFSF9P41273 JCHAIN-201ENST00000254801 1438 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
TNFSF9P41273 SPATA31D2P-201ENST00000429999 4388 ntBASIC4.49□□□□□ -1.69
TNFSF9P41273 OR11H4-201ENST00000315409 1082 ntBASIC4.49□□□□□ -1.69
TNFSF9P41273 ATP5F1P2-201ENST00000398143 760 ntBASIC4.49□□□□□ -1.69
TNFSF9P41273 RPL31-206ENST00000409650 770 ntAPPRIS ALT1 TSL 2 BASIC4.49□□□□□ -1.69
TNFSF9P41273 EIF4A1P3-201ENST00000411521 244 ntBASIC4.49□□□□□ -1.69
TNFSF9P41273 CYP3A43-205ENST00000415413 990 ntTSL 5 BASIC4.49□□□□□ -1.69
TNFSF9P41273 GNG5P5-201ENST00000420444 220 ntBASIC4.49□□□□□ -1.69
TNFSF9P41273 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
TNFSF9P41273 RPL23AP89-201ENST00000439324 255 ntBASIC4.49□□□□□ -1.69
TNFSF9P41273 DAZAP2-204ENST00000439799 701 ntTSL 2 BASIC4.49□□□□□ -1.69
TNFSF9P41273 AC002553.2-201ENST00000453217 340 ntBASIC4.49□□□□□ -1.69
TNFSF9P41273 HSPE1P22-201ENST00000456856 327 ntBASIC4.49□□□□□ -1.69
TNFSF9P41273 RPS4XP12-201ENST00000461747 709 ntBASIC4.49□□□□□ -1.69
TNFSF9P41273 SNORD116-30-201ENST00000516468 85 ntBASIC4.49□□□□□ -1.69
TNFSF9P41273 MIR2116-201ENST00000517221 80 ntBASIC4.49□□□□□ -1.69
TNFSF9P41273 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC4.49□□□□□ -1.69
TNFSF9P41273 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC4.49□□□□□ -1.69
TNFSF9P41273 AC074050.1-201ENST00000563247 211 ntBASIC4.49□□□□□ -1.69
TNFSF9P41273 AC115989.2-201ENST00000578640 563 ntBASIC4.49□□□□□ -1.69
TNFSF9P41273 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC4.49□□□□□ -1.69
TNFSF9P41273 AL121890.2-201ENST00000617644 465 ntBASIC4.49□□□□□ -1.69
TNFSF9P41273 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
TNFSF9P41273 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
TNFSF9P41273 LINC00690-201ENST00000429949 1365 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
TNFSF9P41273 DAOA-211ENST00000618629 1368 ntAPPRIS P3 TSL 5 BASIC4.49□□□□□ -1.69
TNFSF9P41273 AC093849.1-201ENST00000563631 2209 ntBASIC4.49□□□□□ -1.69
TNFSF9P41273 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
TNFSF9P41273 AC019072.1-201ENST00000604535 1551 ntBASIC4.48□□□□□ -1.69
TNFSF9P41273 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
TNFSF9P41273 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC4.48□□□□□ -1.69
TNFSF9P41273 RLIMP1-201ENST00000339626 1680 ntBASIC4.48□□□□□ -1.69
TNFSF9P41273 SPRR2C-201ENST00000290702 219 ntBASIC4.48□□□□□ -1.69
TNFSF9P41273 RNA5SP388-201ENST00000362584 119 ntBASIC4.48□□□□□ -1.69
TNFSF9P41273 Y_RNA.62-201ENST00000362840 99 ntBASIC4.48□□□□□ -1.69
TNFSF9P41273 RNU6-697P-201ENST00000363348 107 ntBASIC4.48□□□□□ -1.69
TNFSF9P41273 SNORA37-201ENST00000384504 129 ntBASIC4.48□□□□□ -1.69
TNFSF9P41273 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
TNFSF9P41273 ARL4A-204ENST00000396664 1144 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
TNFSF9P41273 TPT1P2-201ENST00000413105 503 ntBASIC4.48□□□□□ -1.69
TNFSF9P41273 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC4.48□□□□□ -1.69
TNFSF9P41273 SLC4A1APP1-201ENST00000419995 602 ntBASIC4.48□□□□□ -1.69
TNFSF9P41273 AC013470.3-201ENST00000420252 1194 ntBASIC4.48□□□□□ -1.69
TNFSF9P41273 AC007557.4-201ENST00000421907 430 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
TNFSF9P41273 RCC2P2-201ENST00000422174 918 ntBASIC4.48□□□□□ -1.69
TNFSF9P41273 LINC00348-201ENST00000428761 948 ntTSL 3 BASIC4.48□□□□□ -1.69
TNFSF9P41273 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC4.48□□□□□ -1.69
TNFSF9P41273 POU6F2-AS1-201ENST00000433519 381 ntTSL 3 BASIC4.48□□□□□ -1.69
TNFSF9P41273 AC122718.1-201ENST00000439448 744 ntBASIC4.48□□□□□ -1.69
TNFSF9P41273 GEMIN8P3-201ENST00000445417 720 ntBASIC4.48□□□□□ -1.69
TNFSF9P41273 AC239367.2-201ENST00000447309 705 ntBASIC4.48□□□□□ -1.69
TNFSF9P41273 AL137001.1-201ENST00000450212 199 ntTSL 3 BASIC4.48□□□□□ -1.69
TNFSF9P41273 AC009365.2-201ENST00000453078 799 ntTSL 3 BASIC4.48□□□□□ -1.69
TNFSF9P41273 FAM133DP-201ENST00000464802 691 ntBASIC4.48□□□□□ -1.69
TNFSF9P41273 SEC22A-207ENST00000481965 673 ntTSL 3 BASIC4.48□□□□□ -1.69
TNFSF9P41273 HPRT1P2-201ENST00000505250 544 ntBASIC4.48□□□□□ -1.69
TNFSF9P41273 TCP11X3P-202ENST00000514289 1254 ntBASIC4.48□□□□□ -1.69
TNFSF9P41273 AC090541.1-201ENST00000519803 467 ntTSL 3 BASIC4.48□□□□□ -1.69
TNFSF9P41273 AP000462.1-201ENST00000535704 818 ntTSL 3 BASIC4.48□□□□□ -1.69
TNFSF9P41273 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC4.48□□□□□ -1.69
TNFSF9P41273 AL137246.1-201ENST00000607072 977 ntBASIC4.48□□□□□ -1.69
TNFSF9P41273 AC090948.2-201ENST00000607363 564 ntBASIC4.48□□□□□ -1.69
TNFSF9P41273 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC4.48□□□□□ -1.69
TNFSF9P41273 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC4.48□□□□□ -1.69
TNFSF9P41273 Z82217.1-201ENST00000625157 8149 ntBASIC4.48□□□□□ -1.69
TNFSF9P41273 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
TNFSF9P41273 AP001273.1-201ENST00000624493 3152 ntBASIC4.48□□□□□ -1.69
TNFSF9P41273 IL6ST-212ENST00000522633 1878 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
TNFSF9P41273 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC4.47□□□□□ -1.69
TNFSF9P41273 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
TNFSF9P41273 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
TNFSF9P41273 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC4.47□□□□□ -1.69
TNFSF9P41273 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC4.47□□□□□ -1.69
TNFSF9P41273 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC4.47□□□□□ -1.69
TNFSF9P41273 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC4.47□□□□□ -1.69
TNFSF9P41273 TAF1A-AS1-202ENST00000427540 750 ntTSL 2 BASIC4.47□□□□□ -1.69
TNFSF9P41273 AL358472.1-201ENST00000431295 329 ntBASIC4.47□□□□□ -1.69
TNFSF9P41273 RPS4XP4-201ENST00000443195 763 ntBASIC4.47□□□□□ -1.69
TNFSF9P41273 CDC27P1-201ENST00000445384 715 ntBASIC4.47□□□□□ -1.69
TNFSF9P41273 OR6C72P-201ENST00000451403 892 ntBASIC4.47□□□□□ -1.69
TNFSF9P41273 BLNK-209ENST00000495266 440 ntTSL 5 BASIC4.47□□□□□ -1.69
TNFSF9P41273 TATDN1-202ENST00000517678 815 ntTSL 3 BASIC4.47□□□□□ -1.69
TNFSF9P41273 AC134698.5-201ENST00000519444 336 ntBASIC4.47□□□□□ -1.69
TNFSF9P41273 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
TNFSF9P41273 NAV2-AS3-201ENST00000534036 598 ntTSL 3 BASIC4.47□□□□□ -1.69
TNFSF9P41273 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC4.47□□□□□ -1.69
TNFSF9P41273 ARL6IP1P1-201ENST00000545836 610 ntBASIC4.47□□□□□ -1.69
TNFSF9P41273 AC124068.1-201ENST00000563131 678 ntBASIC4.47□□□□□ -1.69
TNFSF9P41273 AC114878.2-201ENST00000604863 1251 ntBASIC4.47□□□□□ -1.69
TNFSF9P41273 MIR7154-201ENST00000620673 73 ntBASIC4.47□□□□□ -1.69
TNFSF9P41273 AC112484.5-201ENST00000624189 228 ntBASIC4.47□□□□□ -1.69
TNFSF9P41273 AL136084.2-203ENST00000630758 690 ntTSL 5 BASIC4.47□□□□□ -1.69
TNFSF9P41273 MTCO1P22-201ENST00000604619 1360 ntBASIC4.47□□□□□ -1.69
TNFSF9P41273 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
TNFSF9P41273 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 87.9 ms