Protein–RNA interactions for Protein: P40939

HADHA, Trifunctional enzyme subunit alpha, mitochondrial, humanhuman

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HADHAP40939 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
HADHAP40939 AL445433.1-201ENST00000457507 257 ntBASIC4.95□□□□□ -1.62
HADHAP40939 AC006511.1-201ENST00000470614 315 ntBASIC4.95□□□□□ -1.62
HADHAP40939 AL035404.1-201ENST00000497982 568 ntBASIC4.95□□□□□ -1.62
HADHAP40939 HPRT1P2-201ENST00000505250 544 ntBASIC4.95□□□□□ -1.62
HADHAP40939 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC4.95□□□□□ -1.62
HADHAP40939 RNU6ATAC24P-201ENST00000516811 135 ntBASIC4.95□□□□□ -1.62
HADHAP40939 HDAC2-AS2-207ENST00000518470 563 ntTSL 4 BASIC4.95□□□□□ -1.62
HADHAP40939 LINC01900-202ENST00000584898 603 ntTSL 5 BASIC4.95□□□□□ -1.62
HADHAP40939 AC115085.1-201ENST00000588924 229 ntBASIC4.95□□□□□ -1.62
HADHAP40939 AC024940.4-201ENST00000605507 246 ntBASIC4.95□□□□□ -1.62
HADHAP40939 AL121890.3-201ENST00000618494 516 ntBASIC4.95□□□□□ -1.62
HADHAP40939 AC007275.1-201ENST00000621243 671 ntBASIC4.95□□□□□ -1.62
HADHAP40939 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC4.95□□□□□ -1.62
HADHAP40939 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC4.95□□□□□ -1.62
HADHAP40939 MGP-203ENST00000539261 1405 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
HADHAP40939 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
HADHAP40939 MAPK10-286ENST00000641208 8747 ntBASIC4.94□□□□□ -1.62
HADHAP40939 AC073055.1-201ENST00000456901 1621 ntBASIC4.94□□□□□ -1.62
HADHAP40939 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
HADHAP40939 BBX-203ENST00000402543 3980 ntTSL 5 BASIC4.94□□□□□ -1.62
HADHAP40939 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.94□□□□□ -1.62
HADHAP40939 MTCO1P6-201ENST00000481192 1384 ntBASIC4.94□□□□□ -1.62
HADHAP40939 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC4.94□□□□□ -1.62
HADHAP40939 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC4.94□□□□□ -1.62
HADHAP40939 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
HADHAP40939 RNU4-4P-201ENST00000364588 130 ntBASIC4.94□□□□□ -1.62
HADHAP40939 UBBP2-201ENST00000376781 231 ntBASIC4.94□□□□□ -1.62
HADHAP40939 RNU6-932P-201ENST00000391108 106 ntBASIC4.94□□□□□ -1.62
HADHAP40939 RPL31P52-201ENST00000407532 367 ntBASIC4.94□□□□□ -1.62
HADHAP40939 PPP3R1-203ENST00000409752 851 ntTSL 3 BASIC4.94□□□□□ -1.62
HADHAP40939 AC096669.1-202ENST00000413708 616 ntTSL 2 BASIC4.94□□□□□ -1.62
HADHAP40939 ARSD-AS1-201ENST00000414053 816 ntTSL 2 BASIC4.94□□□□□ -1.62
HADHAP40939 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC4.94□□□□□ -1.62
HADHAP40939 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC4.94□□□□□ -1.62
HADHAP40939 AP001324.1-201ENST00000428553 399 ntBASIC4.94□□□□□ -1.62
HADHAP40939 CDY14P-201ENST00000431260 1014 ntBASIC4.94□□□□□ -1.62
HADHAP40939 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
HADHAP40939 AC136489.1-201ENST00000438181 717 ntTSL 3 BASIC4.94□□□□□ -1.62
HADHAP40939 CDY12P-201ENST00000440679 1015 ntBASIC4.94□□□□□ -1.62
HADHAP40939 FAM237A-201ENST00000441223 773 ntAPPRIS P1 TSL 2 BASIC4.94□□□□□ -1.62
HADHAP40939 AC073648.4-201ENST00000442655 781 ntBASIC4.94□□□□□ -1.62
HADHAP40939 AC007179.2-204ENST00000444001 765 ntTSL 3 BASIC4.94□□□□□ -1.62
HADHAP40939 AL096855.1-202ENST00000444276 439 ntTSL 2 BASIC4.94□□□□□ -1.62
HADHAP40939 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC4.94□□□□□ -1.62
HADHAP40939 CDY13P-201ENST00000445813 1015 ntBASIC4.94□□□□□ -1.62
HADHAP40939 AL365204.2-201ENST00000446754 687 ntTSL 2 BASIC4.94□□□□□ -1.62
HADHAP40939 EIF4EBP2P1-201ENST00000450009 343 ntBASIC4.94□□□□□ -1.62
HADHAP40939 RHEBP2-201ENST00000450289 600 ntBASIC4.94□□□□□ -1.62
HADHAP40939 CDY23P-201ENST00000451661 1014 ntBASIC4.94□□□□□ -1.62
HADHAP40939 AC018742.1-202ENST00000457901 504 ntTSL 3 BASIC4.94□□□□□ -1.62
HADHAP40939 AC006148.2-201ENST00000467017 650 ntTSL 2 BASIC4.94□□□□□ -1.62
HADHAP40939 AC140172.1-201ENST00000502928 141 ntBASIC4.94□□□□□ -1.62
HADHAP40939 PGRMC2-203ENST00000503588 818 ntTSL 4 BASIC4.94□□□□□ -1.62
HADHAP40939 AC104071.1-201ENST00000505636 602 ntTSL 3 BASIC4.94□□□□□ -1.62
HADHAP40939 AC097534.1-201ENST00000507803 521 ntTSL 4 BASIC4.94□□□□□ -1.62
HADHAP40939 AC104827.1-202ENST00000511917 1049 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
HADHAP40939 AC099550.1-201ENST00000515495 871 ntTSL 3 BASIC4.94□□□□□ -1.62
HADHAP40939 TATDN1-202ENST00000517678 815 ntTSL 3 BASIC4.94□□□□□ -1.62
HADHAP40939 AP001574.1-201ENST00000519566 546 ntTSL 4 BASIC4.94□□□□□ -1.62
HADHAP40939 AC104036.1-201ENST00000523550 611 ntTSL 3 BASIC4.94□□□□□ -1.62
HADHAP40939 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC4.94□□□□□ -1.62
HADHAP40939 AP003386.1-201ENST00000526509 504 ntTSL 3 BASIC4.94□□□□□ -1.62
HADHAP40939 AC010735.1-201ENST00000567305 1026 ntBASIC4.94□□□□□ -1.62
HADHAP40939 AP001521.2-201ENST00000608772 546 ntBASIC4.94□□□□□ -1.62
HADHAP40939 AL669942.2-201ENST00000620352 697 ntBASIC4.94□□□□□ -1.62
HADHAP40939 AC006927.2-201ENST00000639256 389 ntBASIC4.94□□□□□ -1.62
HADHAP40939 C2orf83-206ENST00000642055 453 ntAPPRIS P3 BASIC4.94□□□□□ -1.62
HADHAP40939 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC4.94□□□□□ -1.62
HADHAP40939 AL049737.1-201ENST00000413920 1403 ntBASIC4.94□□□□□ -1.62
HADHAP40939 NEAT1-202ENST00000501122 22743 ntBASIC4.94□□□□□ -1.62
HADHAP40939 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
HADHAP40939 ST7-212ENST00000422922 1887 ntTSL 5 BASIC4.94□□□□□ -1.62
HADHAP40939 USP8-204ENST00000425032 3559 ntTSL 2 BASIC4.94□□□□□ -1.62
HADHAP40939 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
HADHAP40939 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
HADHAP40939 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC4.94□□□□□ -1.62
HADHAP40939 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC4.94□□□□□ -1.62
HADHAP40939 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC4.93□□□□□ -1.62
HADHAP40939 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
HADHAP40939 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
HADHAP40939 EFCAB3-201ENST00000305286 1542 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
HADHAP40939 AL353743.4-201ENST00000422653 1547 ntBASIC4.93□□□□□ -1.62
HADHAP40939 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
HADHAP40939 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
HADHAP40939 IKZF3-202ENST00000346243 1296 ntTSL 5 BASIC4.93□□□□□ -1.62
HADHAP40939 SNORA51.12-201ENST00000384448 134 ntBASIC4.93□□□□□ -1.62
HADHAP40939 SYCP3-202ENST00000392924 845 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
HADHAP40939 AL109941.1-201ENST00000401925 229 ntBASIC4.93□□□□□ -1.62
HADHAP40939 GLS-204ENST00000409428 816 ntTSL 2 BASIC4.93□□□□□ -1.62
HADHAP40939 RNU2-65P-201ENST00000410162 185 ntBASIC4.93□□□□□ -1.62
HADHAP40939 AL139128.1-201ENST00000413921 941 ntBASIC4.93□□□□□ -1.62
HADHAP40939 AC234782.4-201ENST00000417646 1048 ntBASIC4.93□□□□□ -1.62
HADHAP40939 AF186996.5-201ENST00000418098 904 ntBASIC4.93□□□□□ -1.62
HADHAP40939 RBMY2KP-201ENST00000418221 992 ntBASIC4.93□□□□□ -1.62
HADHAP40939 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC4.93□□□□□ -1.62
HADHAP40939 AC015971.1-204ENST00000424788 1147 ntTSL 5 BASIC4.93□□□□□ -1.62
HADHAP40939 AL590762.4-201ENST00000425885 253 ntBASIC4.93□□□□□ -1.62
HADHAP40939 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC4.93□□□□□ -1.62
HADHAP40939 AL136987.1-201ENST00000434300 396 ntTSL 5 BASIC4.93□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 124.3 ms