Protein–RNA interactions for Protein: P28288

ABCD3, ATP-binding cassette sub-family D member 3, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD3P28288 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
ABCD3P28288 FAM35A-201ENST00000298784 3402 ntAPPRIS P1 TSL 2 BASIC4.76□□□□□ -1.65
ABCD3P28288 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC4.76□□□□□ -1.65
ABCD3P28288 ZNF29P-201ENST00000225587 168 ntBASIC4.76□□□□□ -1.65
ABCD3P28288 CSTA-201ENST00000264474 751 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
ABCD3P28288 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
ABCD3P28288 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
ABCD3P28288 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC4.76□□□□□ -1.65
ABCD3P28288 FHIT-201ENST00000341848 174 ntTSL 3 BASIC4.76□□□□□ -1.65
ABCD3P28288 VIP-202ENST00000367244 1584 ntAPPRIS P4 TSL 1 (best) BASIC4.76□□□□□ -1.65
ABCD3P28288 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC4.76□□□□□ -1.65
ABCD3P28288 AC005522.1-201ENST00000395416 346 ntBASIC4.76□□□□□ -1.65
ABCD3P28288 DNAJA1P4-201ENST00000406473 1166 ntBASIC4.76□□□□□ -1.65
ABCD3P28288 LINC00342-201ENST00000412393 654 ntTSL 3 BASIC4.76□□□□□ -1.65
ABCD3P28288 AL596247.1-201ENST00000416076 442 ntTSL 3 BASIC4.76□□□□□ -1.65
ABCD3P28288 OR6C64P-201ENST00000419708 825 ntBASIC4.76□□□□□ -1.65
ABCD3P28288 AL356056.1-206ENST00000424615 407 ntTSL 5 BASIC4.76□□□□□ -1.65
ABCD3P28288 AL138785.1-201ENST00000425821 331 ntBASIC4.76□□□□□ -1.65
ABCD3P28288 AC092648.1-201ENST00000425870 423 ntBASIC4.76□□□□□ -1.65
ABCD3P28288 AC068481.1-202ENST00000428379 555 ntTSL 4 BASIC4.76□□□□□ -1.65
ABCD3P28288 MTCO1P3-201ENST00000429327 192 ntBASIC4.76□□□□□ -1.65
ABCD3P28288 AL627308.1-201ENST00000435693 821 ntBASIC4.76□□□□□ -1.65
ABCD3P28288 Z80107.1-201ENST00000436830 412 ntBASIC4.76□□□□□ -1.65
ABCD3P28288 AL591719.2-201ENST00000437400 386 ntTSL 3 BASIC4.76□□□□□ -1.65
ABCD3P28288 LINC00376-201ENST00000439454 693 ntTSL 5 BASIC4.76□□□□□ -1.65
ABCD3P28288 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC4.76□□□□□ -1.65
ABCD3P28288 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC4.76□□□□□ -1.65
ABCD3P28288 LINC00448-202ENST00000448411 433 ntTSL 2 BASIC4.76□□□□□ -1.65
ABCD3P28288 MYO5BP2-201ENST00000449815 1277 ntBASIC4.76□□□□□ -1.65
ABCD3P28288 ZNF886P-201ENST00000450781 723 ntBASIC4.76□□□□□ -1.65
ABCD3P28288 BX842559.2-201ENST00000451418 605 ntBASIC4.76□□□□□ -1.65
ABCD3P28288 AC115989.1-202ENST00000452153 1150 ntTSL 2 BASIC4.76□□□□□ -1.65
ABCD3P28288 RPS6P2-201ENST00000454208 705 ntBASIC4.76□□□□□ -1.65
ABCD3P28288 AC092155.2-201ENST00000454675 477 ntBASIC4.76□□□□□ -1.65
ABCD3P28288 RPL5P22-201ENST00000480199 884 ntBASIC4.76□□□□□ -1.65
ABCD3P28288 AC010460.2-201ENST00000509054 677 ntBASIC4.76□□□□□ -1.65
ABCD3P28288 AC048346.1-201ENST00000510247 144 ntBASIC4.76□□□□□ -1.65
ABCD3P28288 AC005351.1-201ENST00000511152 786 ntBASIC4.76□□□□□ -1.65
ABCD3P28288 LINC01030-201ENST00000517505 738 ntTSL 3 BASIC4.76□□□□□ -1.65
ABCD3P28288 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC4.76□□□□□ -1.65
ABCD3P28288 AC023632.5-201ENST00000521010 491 ntTSL 3 BASIC4.76□□□□□ -1.65
ABCD3P28288 AP001207.1-201ENST00000524051 481 ntBASIC4.76□□□□□ -1.65
ABCD3P28288 AP001372.4-201ENST00000524889 472 ntBASIC4.76□□□□□ -1.65
ABCD3P28288 OR4C2P-201ENST00000530855 1064 ntBASIC4.76□□□□□ -1.65
ABCD3P28288 TDO2-208ENST00000536354 1701 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
ABCD3P28288 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC4.76□□□□□ -1.65
ABCD3P28288 LINC02402-201ENST00000550337 1212 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
ABCD3P28288 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
ABCD3P28288 MTCYBP13-201ENST00000578634 1093 ntBASIC4.76□□□□□ -1.65
ABCD3P28288 MOCS2-209ENST00000582677 741 ntTSL 5 BASIC4.76□□□□□ -1.65
ABCD3P28288 AC022069.1-201ENST00000582910 658 ntBASIC4.76□□□□□ -1.65
ABCD3P28288 AC005191.1-201ENST00000603950 358 ntBASIC4.76□□□□□ -1.65
ABCD3P28288 AC106052.1-201ENST00000608029 497 ntBASIC4.76□□□□□ -1.65
ABCD3P28288 AL390964.1-201ENST00000622486 845 ntTSL 3 BASIC4.76□□□□□ -1.65
ABCD3P28288 PHACTR2P1-202ENST00000636592 773 ntTSL 5 BASIC4.76□□□□□ -1.65
ABCD3P28288 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC4.76□□□□□ -1.65
ABCD3P28288 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC4.76□□□□□ -1.65
ABCD3P28288 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
ABCD3P28288 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC4.76□□□□□ -1.65
ABCD3P28288 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC4.76□□□□□ -1.65
ABCD3P28288 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC4.76□□□□□ -1.65
ABCD3P28288 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
ABCD3P28288 AC107081.3-201ENST00000612715 2034 ntBASIC4.75□□□□□ -1.65
ABCD3P28288 AC109780.1-201ENST00000451768 1344 ntBASIC4.75□□□□□ -1.65
ABCD3P28288 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC4.75□□□□□ -1.65
ABCD3P28288 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC4.75□□□□□ -1.65
ABCD3P28288 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
ABCD3P28288 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
ABCD3P28288 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC4.75□□□□□ -1.65
ABCD3P28288 ADCY10-201ENST00000367848 5055 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
ABCD3P28288 AC016716.1-201ENST00000265882 708 ntBASIC4.75□□□□□ -1.65
ABCD3P28288 RPL9-201ENST00000295955 750 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
ABCD3P28288 U8.4-201ENST00000363626 134 ntBASIC4.75□□□□□ -1.65
ABCD3P28288 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
ABCD3P28288 UBE2U-201ENST00000371076 1136 ntAPPRIS P2 TSL 1 (best) BASIC4.75□□□□□ -1.65
ABCD3P28288 LINC00474-201ENST00000374014 769 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
ABCD3P28288 EIF1AY-202ENST00000382772 746 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
ABCD3P28288 RN7SKP97-201ENST00000410966 333 ntBASIC4.75□□□□□ -1.65
ABCD3P28288 DPPA2P3-201ENST00000411853 655 ntBASIC4.75□□□□□ -1.65
ABCD3P28288 AL359633.2-201ENST00000415787 622 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
ABCD3P28288 ATP6V1G1P7-201ENST00000415853 349 ntBASIC4.75□□□□□ -1.65
ABCD3P28288 AC079760.2-203ENST00000418395 489 ntTSL 3 BASIC4.75□□□□□ -1.65
ABCD3P28288 SLC16A12-AS1-201ENST00000423474 405 ntTSL 3 BASIC4.75□□□□□ -1.65
ABCD3P28288 AL359853.3-201ENST00000423879 544 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
ABCD3P28288 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC4.75□□□□□ -1.65
ABCD3P28288 RAC1P8-201ENST00000427086 527 ntBASIC4.75□□□□□ -1.65
ABCD3P28288 TAF1A-AS1-202ENST00000427540 750 ntTSL 2 BASIC4.75□□□□□ -1.65
ABCD3P28288 HIGD1AP12-201ENST00000427832 281 ntBASIC4.75□□□□□ -1.65
ABCD3P28288 MTND2P5-201ENST00000432656 1006 ntBASIC4.75□□□□□ -1.65
ABCD3P28288 AL035246.1-201ENST00000433554 1255 ntBASIC4.75□□□□□ -1.65
ABCD3P28288 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC4.75□□□□□ -1.65
ABCD3P28288 DMD-AS3-201ENST00000439592 293 ntTSL 3 BASIC4.75□□□□□ -1.65
ABCD3P28288 AL139121.1-201ENST00000445647 244 ntTSL 2 BASIC4.75□□□□□ -1.65
ABCD3P28288 LINC00393-202ENST00000452852 485 ntTSL 3 BASIC4.75□□□□□ -1.65
ABCD3P28288 AC092647.2-201ENST00000452998 253 ntBASIC4.75□□□□□ -1.65
ABCD3P28288 OFD1P7Y-201ENST00000454643 1155 ntBASIC4.75□□□□□ -1.65
ABCD3P28288 AC011287.2-201ENST00000456809 842 ntTSL 5 BASIC4.75□□□□□ -1.65
ABCD3P28288 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC4.75□□□□□ -1.65
ABCD3P28288 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC4.75□□□□□ -1.65
ABCD3P28288 RPL23AP44-201ENST00000482216 473 ntBASIC4.75□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 95.2 ms