Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 EQTN-204ENST00000537675 879 ntAPPRIS ALT2 TSL 1 (best) BASIC3.55□□□□□ -1.84
COL8A2P25067 OR8R1P-201ENST00000543943 764 ntBASIC3.55□□□□□ -1.84
COL8A2P25067 AC005692.2-201ENST00000566521 596 ntTSL 3 BASIC3.55□□□□□ -1.84
COL8A2P25067 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC3.55□□□□□ -1.84
COL8A2P25067 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
COL8A2P25067 LINC02565-201ENST00000592678 478 ntTSL 2 BASIC3.55□□□□□ -1.84
COL8A2P25067 AL138721.1-201ENST00000616756 179 ntBASIC3.55□□□□□ -1.84
COL8A2P25067 AC131238.1-201ENST00000617135 328 ntBASIC3.55□□□□□ -1.84
COL8A2P25067 AC019278.1-201ENST00000623516 479 ntBASIC3.55□□□□□ -1.84
COL8A2P25067 AL136084.2-203ENST00000630758 690 ntTSL 5 BASIC3.55□□□□□ -1.84
COL8A2P25067 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
COL8A2P25067 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
COL8A2P25067 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC3.55□□□□□ -1.84
COL8A2P25067 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
COL8A2P25067 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC3.55□□□□□ -1.84
COL8A2P25067 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC3.55□□□□□ -1.84
COL8A2P25067 Z82217.1-201ENST00000625157 8149 ntBASIC3.55□□□□□ -1.84
COL8A2P25067 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC3.55□□□□□ -1.84
COL8A2P25067 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC3.55□□□□□ -1.84
COL8A2P25067 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC3.55□□□□□ -1.84
COL8A2P25067 ZSCAN4-202ENST00000612521 1979 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
COL8A2P25067 LINC01355-201ENST00000566551 5444 ntBASIC3.54□□□□□ -1.84
COL8A2P25067 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC3.54□□□□□ -1.84
COL8A2P25067 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC3.54□□□□□ -1.84
COL8A2P25067 USP50-205ENST00000616326 1419 ntAPPRIS ALT2 TSL 5 BASIC3.54□□□□□ -1.84
COL8A2P25067 SLC38A9-218ENST00000512595 1756 ntTSL 2 BASIC3.54□□□□□ -1.84
COL8A2P25067 SPATA31D2P-201ENST00000429999 4388 ntBASIC3.54□□□□□ -1.84
COL8A2P25067 Y_RNA.126-201ENST00000363382 111 ntBASIC3.54□□□□□ -1.84
COL8A2P25067 RNA5SP22-201ENST00000365393 109 ntBASIC3.54□□□□□ -1.84
COL8A2P25067 SNX10-203ENST00000409367 746 ntTSL 5 BASIC3.54□□□□□ -1.84
COL8A2P25067 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC3.54□□□□□ -1.84
COL8A2P25067 AL035604.1-201ENST00000416481 531 ntTSL 3 BASIC3.54□□□□□ -1.84
COL8A2P25067 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC3.54□□□□□ -1.84
COL8A2P25067 OR2X1P-201ENST00000421144 687 ntBASIC3.54□□□□□ -1.84
COL8A2P25067 PDSS1P1-201ENST00000422953 1114 ntBASIC3.54□□□□□ -1.84
COL8A2P25067 RPS12P5-201ENST00000423449 371 ntBASIC3.54□□□□□ -1.84
COL8A2P25067 DNAJA1P1-201ENST00000425106 1187 ntBASIC3.54□□□□□ -1.84
COL8A2P25067 HSFY6P-201ENST00000445573 403 ntBASIC3.54□□□□□ -1.84
COL8A2P25067 BX119904.2-201ENST00000446495 512 ntTSL 2 BASIC3.54□□□□□ -1.84
COL8A2P25067 TRBV8-1-201ENST00000481590 279 ntBASIC3.54□□□□□ -1.84
COL8A2P25067 THAP6-209ENST00000507556 1134 ntTSL 2 BASIC3.54□□□□□ -1.84
COL8A2P25067 AC021192.1-201ENST00000510169 791 ntTSL 3 BASIC3.54□□□□□ -1.84
COL8A2P25067 AC008728.1-201ENST00000512730 691 ntTSL 2 BASIC3.54□□□□□ -1.84
COL8A2P25067 AC018682.2-201ENST00000517716 399 ntTSL 5 BASIC3.54□□□□□ -1.84
COL8A2P25067 AL078612.2-201ENST00000525133 646 ntTSL 3 BASIC3.54□□□□□ -1.84
COL8A2P25067 LINC01578-206ENST00000555520 977 ntTSL 3 BASIC3.54□□□□□ -1.84
COL8A2P25067 AC027176.2-201ENST00000559166 746 ntBASIC3.54□□□□□ -1.84
COL8A2P25067 LINC00254-201ENST00000563416 662 ntTSL 3 BASIC3.54□□□□□ -1.84
COL8A2P25067 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC3.54□□□□□ -1.84
COL8A2P25067 AC006270.1-201ENST00000582889 478 ntTSL 3 BASIC3.54□□□□□ -1.84
COL8A2P25067 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC3.54□□□□□ -1.84
COL8A2P25067 AC011503.1-202ENST00000598914 919 ntTSL 2 BASIC3.54□□□□□ -1.84
COL8A2P25067 AC010608.2-201ENST00000624830 470 ntBASIC3.54□□□□□ -1.84
COL8A2P25067 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC3.54□□□□□ -1.84
COL8A2P25067 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC3.54□□□□□ -1.84
COL8A2P25067 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC3.54□□□□□ -1.84
COL8A2P25067 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
COL8A2P25067 CD86-203ENST00000393627 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC3.53□□□□□ -1.84
COL8A2P25067 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC3.53□□□□□ -1.84
COL8A2P25067 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
COL8A2P25067 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
COL8A2P25067 CCNE2-202ENST00000396133 1361 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
COL8A2P25067 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC3.53□□□□□ -1.84
COL8A2P25067 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
COL8A2P25067 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
COL8A2P25067 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC3.53□□□□□ -1.84
COL8A2P25067 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
COL8A2P25067 RLIMP1-201ENST00000339626 1680 ntBASIC3.53□□□□□ -1.84
COL8A2P25067 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
COL8A2P25067 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
COL8A2P25067 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC3.53□□□□□ -1.84
COL8A2P25067 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
COL8A2P25067 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
COL8A2P25067 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
COL8A2P25067 AC067945.1-201ENST00000342609 618 ntBASIC3.53□□□□□ -1.84
COL8A2P25067 SNORA37-201ENST00000384504 129 ntBASIC3.53□□□□□ -1.84
COL8A2P25067 MIR513A2-201ENST00000385249 127 ntBASIC3.53□□□□□ -1.84
COL8A2P25067 AC003035.1-201ENST00000391359 544 ntTSL 3 BASIC3.53□□□□□ -1.84
COL8A2P25067 AL512430.2-201ENST00000406786 339 ntBASIC3.53□□□□□ -1.84
COL8A2P25067 RNU6-628P-201ENST00000410675 107 ntBASIC3.53□□□□□ -1.84
COL8A2P25067 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC3.53□□□□□ -1.84
COL8A2P25067 AL160275.2-201ENST00000412010 394 ntBASIC3.53□□□□□ -1.84
COL8A2P25067 AC108032.1-201ENST00000416706 207 ntBASIC3.53□□□□□ -1.84
COL8A2P25067 AL355994.1-201ENST00000424379 260 ntBASIC3.53□□□□□ -1.84
COL8A2P25067 AL117339.2-201ENST00000430475 180 ntBASIC3.53□□□□□ -1.84
COL8A2P25067 ARL6IP1P2-201ENST00000431356 563 ntBASIC3.53□□□□□ -1.84
COL8A2P25067 AL356276.2-201ENST00000435919 558 ntBASIC3.53□□□□□ -1.84
COL8A2P25067 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC3.53□□□□□ -1.84
COL8A2P25067 AC006326.1-201ENST00000445465 787 ntBASIC3.53□□□□□ -1.84
COL8A2P25067 Z99127.1-201ENST00000452442 670 ntTSL 5 BASIC3.53□□□□□ -1.84
COL8A2P25067 AC080162.1-201ENST00000480764 491 ntTSL 3 BASIC3.53□□□□□ -1.84
COL8A2P25067 AC104164.2-201ENST00000496953 495 ntBASIC3.53□□□□□ -1.84
COL8A2P25067 HPRT1P2-201ENST00000505250 544 ntBASIC3.53□□□□□ -1.84
COL8A2P25067 PGBD4P4-201ENST00000509673 613 ntBASIC3.53□□□□□ -1.84
COL8A2P25067 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC3.53□□□□□ -1.84
COL8A2P25067 PHBP17-201ENST00000528576 541 ntBASIC3.53□□□□□ -1.84
COL8A2P25067 LINC00520-201ENST00000554186 831 ntTSL 5 BASIC3.53□□□□□ -1.84
COL8A2P25067 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC3.53□□□□□ -1.84
COL8A2P25067 TM6SF1-207ENST00000565774 1020 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
COL8A2P25067 AP001542.1-201ENST00000591314 200 ntBASIC3.53□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 82.5 ms