Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC4.65□□□□□ -1.67
CDH3P22223 BNIP3P39-201ENST00000601077 554 ntBASIC4.65□□□□□ -1.67
CDH3P22223 AC011453.2-201ENST00000603737 729 ntBASIC4.65□□□□□ -1.67
CDH3P22223 AC079880.2-201ENST00000603790 1213 ntBASIC4.65□□□□□ -1.67
CDH3P22223 AL121932.1-201ENST00000605542 214 ntBASIC4.65□□□□□ -1.67
CDH3P22223 AC026979.4-201ENST00000606555 645 ntBASIC4.65□□□□□ -1.67
CDH3P22223 AC012557.1-201ENST00000607115 611 ntBASIC4.65□□□□□ -1.67
CDH3P22223 CCL4L2-215ENST00000620055 537 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
CDH3P22223 CCL4-203ENST00000621626 552 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
CDH3P22223 AC012414.7-202ENST00000622705 1090 ntBASIC4.65□□□□□ -1.67
CDH3P22223 AC244517.5-203ENST00000624778 517 ntTSL 2 BASIC4.65□□□□□ -1.67
CDH3P22223 MIR6715B-201ENST00000637172 77 ntBASIC4.65□□□□□ -1.67
CDH3P22223 OR8B2-202ENST00000641451 1056 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
CDH3P22223 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.67
CDH3P22223 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
CDH3P22223 EEF1A1P42-201ENST00000613436 1331 ntBASIC4.65□□□□□ -1.67
CDH3P22223 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC4.65□□□□□ -1.67
CDH3P22223 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
CDH3P22223 AC083899.2-201ENST00000423285 1376 ntBASIC4.65□□□□□ -1.67
CDH3P22223 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC4.65□□□□□ -1.67
CDH3P22223 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC4.65□□□□□ -1.67
CDH3P22223 AL133243.3-201ENST00000617415 3004 ntBASIC4.64□□□□□ -1.67
CDH3P22223 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
CDH3P22223 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
CDH3P22223 AC009951.1-201ENST00000623674 2614 ntBASIC4.64□□□□□ -1.67
CDH3P22223 CYP4Z1-201ENST00000334194 1906 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
CDH3P22223 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC4.64□□□□□ -1.67
CDH3P22223 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
CDH3P22223 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
CDH3P22223 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
CDH3P22223 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC4.64□□□□□ -1.67
CDH3P22223 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC4.64□□□□□ -1.67
CDH3P22223 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
CDH3P22223 SNORD96B-201ENST00000386148 79 ntBASIC4.64□□□□□ -1.67
CDH3P22223 CYB5AP4-201ENST00000396692 399 ntBASIC4.64□□□□□ -1.67
CDH3P22223 AL035405.1-201ENST00000400795 710 ntBASIC4.64□□□□□ -1.67
CDH3P22223 AL355143.1-201ENST00000407101 841 ntBASIC4.64□□□□□ -1.67
CDH3P22223 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC4.64□□□□□ -1.67
CDH3P22223 ATG4AP1-201ENST00000416893 538 ntBASIC4.64□□□□□ -1.67
CDH3P22223 BX510359.2-201ENST00000417920 305 ntBASIC4.64□□□□□ -1.67
CDH3P22223 AL590432.1-201ENST00000420071 566 ntTSL 2 BASIC4.64□□□□□ -1.67
CDH3P22223 AL020993.1-201ENST00000420172 297 ntTSL 3 BASIC4.64□□□□□ -1.67
CDH3P22223 EIF4EP1-201ENST00000422311 642 ntBASIC4.64□□□□□ -1.67
CDH3P22223 RWDD4P2-201ENST00000426392 563 ntBASIC4.64□□□□□ -1.67
CDH3P22223 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
CDH3P22223 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC4.64□□□□□ -1.67
CDH3P22223 RPL12P28-201ENST00000430852 489 ntBASIC4.64□□□□□ -1.67
CDH3P22223 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC4.64□□□□□ -1.67
CDH3P22223 GABRG3-AS1-201ENST00000439938 970 ntTSL 2 BASIC4.64□□□□□ -1.67
CDH3P22223 AL354794.1-201ENST00000442103 516 ntTSL 3 BASIC4.64□□□□□ -1.67
CDH3P22223 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC4.64□□□□□ -1.67
CDH3P22223 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC4.64□□□□□ -1.67
CDH3P22223 AC068492.1-201ENST00000448672 469 ntTSL 3 BASIC4.64□□□□□ -1.67
CDH3P22223 AL356981.1-201ENST00000454879 684 ntBASIC4.64□□□□□ -1.67
CDH3P22223 AL356289.2-201ENST00000455238 292 ntTSL 5 BASIC4.64□□□□□ -1.67
CDH3P22223 RN7SL517P-201ENST00000462240 305 ntBASIC4.64□□□□□ -1.67
CDH3P22223 AC021205.1-201ENST00000468797 348 ntBASIC4.64□□□□□ -1.67
CDH3P22223 MTND6P6-201ENST00000478031 263 ntBASIC4.64□□□□□ -1.67
CDH3P22223 IGLV2-34-201ENST00000490007 283 ntBASIC4.64□□□□□ -1.67
CDH3P22223 AC073073.1-201ENST00000493920 463 ntBASIC4.64□□□□□ -1.67
CDH3P22223 AC109349.1-201ENST00000503299 758 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
CDH3P22223 AC083829.1-201ENST00000503756 657 ntBASIC4.64□□□□□ -1.67
CDH3P22223 AC010627.1-201ENST00000503819 1294 ntBASIC4.64□□□□□ -1.67
CDH3P22223 EPPIN-WFDC6-201ENST00000504988 1156 ntAPPRIS P1 TSL 2 BASIC4.64□□□□□ -1.67
CDH3P22223 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC4.64□□□□□ -1.67
CDH3P22223 C1GALT1P2-201ENST00000510813 1104 ntBASIC4.64□□□□□ -1.67
CDH3P22223 ENPP7P9-201ENST00000514456 627 ntBASIC4.64□□□□□ -1.67
CDH3P22223 LINC02465-204ENST00000514892 481 ntTSL 2 BASIC4.64□□□□□ -1.67
CDH3P22223 MYLK-AS2-202ENST00000515464 754 ntTSL 2 BASIC4.64□□□□□ -1.67
CDH3P22223 RNU6-709P-201ENST00000517257 104 ntBASIC4.64□□□□□ -1.67
CDH3P22223 HIGD1AP18-201ENST00000520730 278 ntBASIC4.64□□□□□ -1.67
CDH3P22223 BUD31P1-201ENST00000521828 359 ntBASIC4.64□□□□□ -1.67
CDH3P22223 C1DP5-201ENST00000525775 383 ntBASIC4.64□□□□□ -1.67
CDH3P22223 LINC02258-201ENST00000551280 777 ntTSL 2 BASIC4.64□□□□□ -1.67
CDH3P22223 PPFIA2-AS1-210ENST00000553197 875 ntTSL 5 BASIC4.64□□□□□ -1.67
CDH3P22223 AL355922.5-201ENST00000553534 351 ntTSL 3 BASIC4.64□□□□□ -1.67
CDH3P22223 AC103876.1-201ENST00000568634 418 ntTSL 3 BASIC4.64□□□□□ -1.67
CDH3P22223 AC005154.1-213ENST00000578572 445 ntTSL 3 BASIC4.64□□□□□ -1.67
CDH3P22223 MIR4716-201ENST00000579628 84 ntBASIC4.64□□□□□ -1.67
CDH3P22223 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC4.64□□□□□ -1.67
CDH3P22223 MTATP6P2-201ENST00000603319 678 ntBASIC4.64□□□□□ -1.67
CDH3P22223 BNIP3P31-201ENST00000604515 566 ntBASIC4.64□□□□□ -1.67
CDH3P22223 IMMP1LP1-201ENST00000605170 488 ntBASIC4.64□□□□□ -1.67
CDH3P22223 SATB1-AS1-259ENST00000629477 853 ntTSL 5 BASIC4.64□□□□□ -1.67
CDH3P22223 RNF123-214ENST00000629802 207 ntTSL 5 BASIC4.64□□□□□ -1.67
CDH3P22223 AC055839.1-201ENST00000634467 498 ntBASIC4.64□□□□□ -1.67
CDH3P22223 CASC15-208ENST00000636388 1174 ntTSL 5 BASIC4.64□□□□□ -1.67
CDH3P22223 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC4.64□□□□□ -1.67
CDH3P22223 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC4.64□□□□□ -1.67
CDH3P22223 AC010300.1-201ENST00000600671 5134 ntBASIC4.64□□□□□ -1.67
CDH3P22223 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC4.64□□□□□ -1.67
CDH3P22223 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC4.63□□□□□ -1.67
CDH3P22223 AC009643.2-201ENST00000603543 1448 ntBASIC4.63□□□□□ -1.67
CDH3P22223 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
CDH3P22223 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
CDH3P22223 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
CDH3P22223 AC017104.4-201ENST00000636283 1592 ntBASIC4.63□□□□□ -1.67
CDH3P22223 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC4.63□□□□□ -1.67
CDH3P22223 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
CDH3P22223 RNA5SP372-201ENST00000390836 115 ntBASIC4.63□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 88.8 ms