Protein–RNA interactions for Protein: P18858

LIG1, DNA ligase 1, humanhuman

Predictions only

Length 919 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1P18858 ANKRD46-204ENST00000519597 2779 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
LIG1P18858 ING3-204ENST00000431467 1447 ntTSL 2 BASIC6.69□□□□□ -1.34
LIG1P18858 LRRC8B-201ENST00000330947 7593 ntAPPRIS P1 TSL 5 BASIC6.69□□□□□ -1.34
LIG1P18858 Y_RNA.61-201ENST00000362835 102 ntBASIC6.69□□□□□ -1.34
LIG1P18858 RNU4-76P-201ENST00000364509 141 ntBASIC6.69□□□□□ -1.34
LIG1P18858 SRY-201ENST00000383070 845 ntAPPRIS P1 BASIC6.69□□□□□ -1.34
LIG1P18858 Y_RNA.408-201ENST00000383987 102 ntBASIC6.69□□□□□ -1.34
LIG1P18858 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC6.69□□□□□ -1.34
LIG1P18858 RNA5SP91-201ENST00000390902 119 ntBASIC6.69□□□□□ -1.34
LIG1P18858 Y_RNA.582-201ENST00000391023 95 ntBASIC6.69□□□□□ -1.34
LIG1P18858 AL034403.1-201ENST00000399414 885 ntBASIC6.69□□□□□ -1.34
LIG1P18858 FGF7P8-201ENST00000402994 292 ntBASIC6.69□□□□□ -1.34
LIG1P18858 RN7SKP279-201ENST00000411383 298 ntBASIC6.69□□□□□ -1.34
LIG1P18858 MTATP6P27-201ENST00000416987 621 ntBASIC6.69□□□□□ -1.34
LIG1P18858 RPL7P30-201ENST00000420888 709 ntBASIC6.69□□□□□ -1.34
LIG1P18858 RPL12P12-201ENST00000424633 501 ntBASIC6.69□□□□□ -1.34
LIG1P18858 TRIM60P10Y-201ENST00000425589 751 ntBASIC6.69□□□□□ -1.34
LIG1P18858 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC6.69□□□□□ -1.34
LIG1P18858 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC6.69□□□□□ -1.34
LIG1P18858 TRIM60P8Y-201ENST00000436338 762 ntBASIC6.69□□□□□ -1.34
LIG1P18858 RPL12P18-201ENST00000437175 325 ntBASIC6.69□□□□□ -1.34
LIG1P18858 AC096775.1-201ENST00000437724 448 ntBASIC6.69□□□□□ -1.34
LIG1P18858 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC6.69□□□□□ -1.34
LIG1P18858 TPT1P14-201ENST00000448018 505 ntBASIC6.69□□□□□ -1.34
LIG1P18858 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC6.69□□□□□ -1.34
LIG1P18858 FAM92A1P2-202ENST00000504766 877 ntBASIC6.69□□□□□ -1.34
LIG1P18858 AC116634.1-201ENST00000506926 447 ntTSL 5 BASIC6.69□□□□□ -1.34
LIG1P18858 AC098799.2-201ENST00000509466 868 ntBASIC6.69□□□□□ -1.34
LIG1P18858 AC008957.1-202ENST00000512329 681 ntTSL 3 BASIC6.69□□□□□ -1.34
LIG1P18858 LINC00861-202ENST00000517869 606 ntTSL 5 BASIC6.69□□□□□ -1.34
LIG1P18858 CASP1-206ENST00000526568 1061 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
LIG1P18858 AC116535.2-201ENST00000532365 441 ntTSL 5 BASIC6.69□□□□□ -1.34
LIG1P18858 CASP1-216ENST00000534497 825 ntTSL 5 BASIC6.69□□□□□ -1.34
LIG1P18858 AL136501.1-201ENST00000555913 790 ntTSL 2 BASIC6.69□□□□□ -1.34
LIG1P18858 AC100821.2-201ENST00000565668 440 ntTSL 2 BASIC6.69□□□□□ -1.34
LIG1P18858 ZNF322P1-201ENST00000568013 1209 ntBASIC6.69□□□□□ -1.34
LIG1P18858 AC090371.2-205ENST00000580366 490 ntTSL 3 BASIC6.69□□□□□ -1.34
LIG1P18858 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC6.69□□□□□ -1.34
LIG1P18858 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC6.69□□□□□ -1.34
LIG1P18858 LINC02073-202ENST00000592081 535 ntTSL 4 BASIC6.69□□□□□ -1.34
LIG1P18858 AC010320.2-203ENST00000601745 574 ntTSL 4 BASIC6.69□□□□□ -1.34
LIG1P18858 AC012065.4-201ENST00000602445 679 ntBASIC6.69□□□□□ -1.34
LIG1P18858 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC6.69□□□□□ -1.34
LIG1P18858 AL158211.4-201ENST00000606988 584 ntBASIC6.69□□□□□ -1.34
LIG1P18858 AC006566.1-201ENST00000608943 513 ntBASIC6.69□□□□□ -1.34
LIG1P18858 AC006338.1-201ENST00000618453 749 ntBASIC6.69□□□□□ -1.34
LIG1P18858 MIR6861-201ENST00000618657 64 ntBASIC6.69□□□□□ -1.34
LIG1P18858 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC6.69□□□□□ -1.34
LIG1P18858 CR381653.2-201ENST00000624041 768 ntBASIC6.69□□□□□ -1.34
LIG1P18858 PCBP1-AS1-282ENST00000625783 826 ntTSL 5 BASIC6.69□□□□□ -1.34
LIG1P18858 AL157786.1-207ENST00000627771 695 ntBASIC6.69□□□□□ -1.34
LIG1P18858 ADAM20-201ENST00000256389 2795 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
LIG1P18858 AL353796.1-201ENST00000561542 3241 ntBASIC6.69□□□□□ -1.34
LIG1P18858 ATF2-212ENST00000426833 4132 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
LIG1P18858 AC109315.1-201ENST00000584143 1347 ntBASIC6.69□□□□□ -1.34
LIG1P18858 DGKB-201ENST00000399322 6684 ntAPPRIS P2 TSL 5 BASIC6.69□□□□□ -1.34
LIG1P18858 AC093849.1-201ENST00000563631 2209 ntBASIC6.69□□□□□ -1.34
LIG1P18858 ZNF107-201ENST00000344930 5174 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
LIG1P18858 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC6.69□□□□□ -1.34
LIG1P18858 ECM2-202ENST00000375540 1606 ntTSL 2 BASIC6.68□□□□□ -1.34
LIG1P18858 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
LIG1P18858 MUT-201ENST00000274813 3749 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
LIG1P18858 EED-206ENST00000527888 1422 ntTSL 2 BASIC6.68□□□□□ -1.34
LIG1P18858 AL137141.1-201ENST00000624622 4836 ntBASIC6.68□□□□□ -1.34
LIG1P18858 RASSF8-201ENST00000282884 1994 ntAPPRIS P1 TSL 2 BASIC6.68□□□□□ -1.34
LIG1P18858 AC098679.1-203ENST00000505532 2227 ntTSL 2 BASIC6.68□□□□□ -1.34
LIG1P18858 CHST9-203ENST00000618847 11388 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
LIG1P18858 PSD3-204ENST00000440756 11690 ntAPPRIS ALT2 TSL 5 BASIC6.68□□□□□ -1.34
LIG1P18858 OR7A5-201ENST00000322301 4216 ntAPPRIS P1 BASIC6.68□□□□□ -1.34
LIG1P18858 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC6.68□□□□□ -1.34
LIG1P18858 TMSB4XP2-201ENST00000335179 210 ntBASIC6.68□□□□□ -1.34
LIG1P18858 RNU6-1011P-201ENST00000384668 107 ntBASIC6.68□□□□□ -1.34
LIG1P18858 MIR525-201ENST00000384978 85 ntBASIC6.68□□□□□ -1.34
LIG1P18858 CYCSP45-201ENST00000402289 315 ntBASIC6.68□□□□□ -1.34
LIG1P18858 RN7SKP56-201ENST00000410513 331 ntBASIC6.68□□□□□ -1.34
LIG1P18858 HSD17B7P1-201ENST00000412419 1017 ntBASIC6.68□□□□□ -1.34
LIG1P18858 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC6.68□□□□□ -1.34
LIG1P18858 OR51A5P-201ENST00000415429 942 ntBASIC6.68□□□□□ -1.34
LIG1P18858 RPL21P32-201ENST00000419877 477 ntBASIC6.68□□□□□ -1.34
LIG1P18858 HSPE1P16-201ENST00000426640 348 ntBASIC6.68□□□□□ -1.34
LIG1P18858 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC6.68□□□□□ -1.34
LIG1P18858 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC6.68□□□□□ -1.34
LIG1P18858 MTATP6P30-201ENST00000443540 664 ntBASIC6.68□□□□□ -1.34
LIG1P18858 HLA-DPA3-207ENST00000454398 229 ntBASIC6.68□□□□□ -1.34
LIG1P18858 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC6.68□□□□□ -1.34
LIG1P18858 RANP1-206ENST00000455094 651 ntBASIC6.68□□□□□ -1.34
LIG1P18858 PNPLA4P1-201ENST00000458328 305 ntBASIC6.68□□□□□ -1.34
LIG1P18858 VPS26AP1-201ENST00000483197 979 ntBASIC6.68□□□□□ -1.34
LIG1P18858 SETSIP-201ENST00000485873 879 ntAPPRIS ALT2 BASIC6.68□□□□□ -1.34
LIG1P18858 AC080013.1-206ENST00000496842 712 ntTSL 2 BASIC6.68□□□□□ -1.34
LIG1P18858 OR5H5P-201ENST00000503164 928 ntBASIC6.68□□□□□ -1.34
LIG1P18858 LINC02360-201ENST00000506195 657 ntTSL 3 BASIC6.68□□□□□ -1.34
LIG1P18858 RNU6-1225P-201ENST00000516336 65 ntBASIC6.68□□□□□ -1.34
LIG1P18858 RNU6-314P-201ENST00000516574 104 ntBASIC6.68□□□□□ -1.34
LIG1P18858 KCTD21-AS1-203ENST00000527321 586 ntTSL 3 BASIC6.68□□□□□ -1.34
LIG1P18858 AC104383.1-201ENST00000530297 370 ntBASIC6.68□□□□□ -1.34
LIG1P18858 AL121594.2-201ENST00000541658 472 ntBASIC6.68□□□□□ -1.34
LIG1P18858 AC004551.1-201ENST00000552784 575 ntTSL 4 BASIC6.68□□□□□ -1.34
LIG1P18858 LINC01906-201ENST00000582962 499 ntTSL 4 BASIC6.68□□□□□ -1.34
LIG1P18858 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC6.68□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 101.6 ms