Protein–RNA interactions for Protein: P18848

ATF4, Cyclic AMP-dependent transcription factor ATF-4, humanhuman

Predicted RBP Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF4P18848 AC244258.1-201ENST00000637553 1071 ntBASIC5.62□□□□□ -1.51
ATF4P18848 AC119674.1-213ENST00000641177 1386 ntBASIC5.62□□□□□ -1.51
ATF4P18848 ECI2-204ENST00000380125 1405 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
ATF4P18848 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC5.62□□□□□ -1.51
ATF4P18848 VPS50-220ENST00000544910 5736 ntTSL 2 BASIC5.62□□□□□ -1.51
ATF4P18848 AL672167.1-205ENST00000641112 3080 ntBASIC5.62□□□□□ -1.51
ATF4P18848 FYB2-201ENST00000343433 3135 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
ATF4P18848 AC017104.4-201ENST00000636283 1592 ntBASIC5.62□□□□□ -1.51
ATF4P18848 CNTRL-204ENST00000373847 3372 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
ATF4P18848 Z96074.1-203ENST00000637685 1746 ntTSL 5 BASIC5.62□□□□□ -1.51
ATF4P18848 MMRN1-202ENST00000394980 5217 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
ATF4P18848 AC018557.1-201ENST00000569274 1790 ntTSL 5 BASIC5.62□□□□□ -1.51
ATF4P18848 PLEKHH2-201ENST00000282406 6981 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
ATF4P18848 TRMT13-202ENST00000370141 3129 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
ATF4P18848 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC5.61□□□□□ -1.51
ATF4P18848 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC5.61□□□□□ -1.51
ATF4P18848 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC5.61□□□□□ -1.51
ATF4P18848 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC5.61□□□□□ -1.51
ATF4P18848 Y_RNA.1-201ENST00000352915 104 ntBASIC5.61□□□□□ -1.51
ATF4P18848 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
ATF4P18848 MT-CO1-201ENST00000361624 1542 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
ATF4P18848 RN7SKP81-201ENST00000365603 331 ntBASIC5.61□□□□□ -1.51
ATF4P18848 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC5.61□□□□□ -1.51
ATF4P18848 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
ATF4P18848 Y_RNA.450-201ENST00000384198 113 ntBASIC5.61□□□□□ -1.51
ATF4P18848 Y_RNA.453-201ENST00000384223 109 ntBASIC5.61□□□□□ -1.51
ATF4P18848 KRTAP3-1-201ENST00000391588 594 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
ATF4P18848 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC5.61□□□□□ -1.51
ATF4P18848 VN1R33P-201ENST00000411800 887 ntBASIC5.61□□□□□ -1.51
ATF4P18848 SLC8A1-AS1-201ENST00000413479 800 ntTSL 5 BASIC5.61□□□□□ -1.51
ATF4P18848 AC017104.2-201ENST00000417000 321 ntBASIC5.61□□□□□ -1.51
ATF4P18848 AC118470.1-201ENST00000419891 453 ntAPPRIS P1 TSL 3 BASIC5.61□□□□□ -1.51
ATF4P18848 RPS15AP30-201ENST00000420976 390 ntBASIC5.61□□□□□ -1.51
ATF4P18848 GRPEL2P2-201ENST00000421856 670 ntBASIC5.61□□□□□ -1.51
ATF4P18848 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC5.61□□□□□ -1.51
ATF4P18848 AC000111.3-201ENST00000433478 193 ntBASIC5.61□□□□□ -1.51
ATF4P18848 AC119618.1-201ENST00000434191 222 ntBASIC5.61□□□□□ -1.51
ATF4P18848 AC002486.1-201ENST00000435098 391 ntBASIC5.61□□□□□ -1.51
ATF4P18848 OR5G3-201ENST00000435756 929 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
ATF4P18848 AC122718.1-201ENST00000439448 744 ntBASIC5.61□□□□□ -1.51
ATF4P18848 AC108039.2-201ENST00000440214 359 ntBASIC5.61□□□□□ -1.51
ATF4P18848 USP9YP15-201ENST00000442391 422 ntBASIC5.61□□□□□ -1.51
ATF4P18848 AC093157.1-202ENST00000446527 1045 ntTSL 3 BASIC5.61□□□□□ -1.51
ATF4P18848 AL451074.4-201ENST00000447545 470 ntBASIC5.61□□□□□ -1.51
ATF4P18848 AC079448.1-201ENST00000449377 373 ntBASIC5.61□□□□□ -1.51
ATF4P18848 AL591623.2-201ENST00000449978 222 ntBASIC5.61□□□□□ -1.51
ATF4P18848 VN1R38P-201ENST00000450265 887 ntBASIC5.61□□□□□ -1.51
ATF4P18848 AC108868.2-201ENST00000451464 511 ntTSL 2 BASIC5.61□□□□□ -1.51
ATF4P18848 AL034399.1-201ENST00000451535 380 ntBASIC5.61□□□□□ -1.51
ATF4P18848 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
ATF4P18848 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC5.61□□□□□ -1.51
ATF4P18848 FAM133DP-201ENST00000464802 691 ntBASIC5.61□□□□□ -1.51
ATF4P18848 RN7SL145P-201ENST00000469955 296 ntBASIC5.61□□□□□ -1.51
ATF4P18848 AC015820.1-201ENST00000473882 321 ntBASIC5.61□□□□□ -1.51
ATF4P18848 OR5H5P-201ENST00000503164 928 ntBASIC5.61□□□□□ -1.51
ATF4P18848 AC004069.1-201ENST00000504082 549 ntTSL 4 BASIC5.61□□□□□ -1.51
ATF4P18848 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC5.61□□□□□ -1.51
ATF4P18848 AC114967.1-201ENST00000504890 259 ntBASIC5.61□□□□□ -1.51
ATF4P18848 AC006070.1-201ENST00000508151 193 ntBASIC5.61□□□□□ -1.51
ATF4P18848 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC5.61□□□□□ -1.51
ATF4P18848 AC111194.1-201ENST00000509711 422 ntTSL 3 BASIC5.61□□□□□ -1.51
ATF4P18848 AC009646.1-201ENST00000510455 318 ntBASIC5.61□□□□□ -1.51
ATF4P18848 GRAMD2B-210ENST00000511134 1577 ntTSL 2 BASIC5.61□□□□□ -1.51
ATF4P18848 AC012613.1-202ENST00000512647 424 ntTSL 3 BASIC5.61□□□□□ -1.51
ATF4P18848 RPL10P18-201ENST00000519384 309 ntBASIC5.61□□□□□ -1.51
ATF4P18848 JAML-206ENST00000526620 1383 ntAPPRIS ALT2 TSL 2 BASIC5.61□□□□□ -1.51
ATF4P18848 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC5.61□□□□□ -1.51
ATF4P18848 AC073571.1-201ENST00000549103 475 ntTSL 3 BASIC5.61□□□□□ -1.51
ATF4P18848 AC067735.1-201ENST00000551152 526 ntTSL 2 BASIC5.61□□□□□ -1.51
ATF4P18848 KYNUP3-201ENST00000574386 1341 ntBASIC5.61□□□□□ -1.51
ATF4P18848 RN7SL657P-201ENST00000582431 293 ntBASIC5.61□□□□□ -1.51
ATF4P18848 AC011483.2-201ENST00000594512 536 ntTSL 4 BASIC5.61□□□□□ -1.51
ATF4P18848 CUX2P1-201ENST00000606426 298 ntBASIC5.61□□□□□ -1.51
ATF4P18848 AC015982.1-201ENST00000608113 465 ntBASIC5.61□□□□□ -1.51
ATF4P18848 AP001596.2-201ENST00000608410 312 ntBASIC5.61□□□□□ -1.51
ATF4P18848 AC092954.2-201ENST00000609103 430 ntBASIC5.61□□□□□ -1.51
ATF4P18848 AL022238.3-201ENST00000609279 443 ntBASIC5.61□□□□□ -1.51
ATF4P18848 AC245407.2-201ENST00000614199 451 ntBASIC5.61□□□□□ -1.51
ATF4P18848 MIR6731-201ENST00000614863 72 ntBASIC5.61□□□□□ -1.51
ATF4P18848 AC009120.2-204ENST00000621548 2032 ntBASIC5.61□□□□□ -1.51
ATF4P18848 AL353898.2-201ENST00000623000 255 ntBASIC5.61□□□□□ -1.51
ATF4P18848 ACTR3BP2-202ENST00000623630 1338 ntBASIC5.61□□□□□ -1.51
ATF4P18848 SPTY2D1-AS1-206ENST00000636011 853 ntAPPRIS ALT2 TSL 5 BASIC5.61□□□□□ -1.51
ATF4P18848 AC002429.2-202ENST00000637269 394 ntAPPRIS P1 TSL 3 BASIC5.61□□□□□ -1.51
ATF4P18848 CCNT1-206ENST00000640148 596 ntTSL 5 BASIC5.61□□□□□ -1.51
ATF4P18848 AFF2-201ENST00000286437 12280 ntTSL 2 BASIC5.61□□□□□ -1.51
ATF4P18848 OR51I2-202ENST00000641930 3302 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
ATF4P18848 AL022311.1-201ENST00000623726 19416 ntBASIC5.6□□□□□ -1.51
ATF4P18848 RAB30-214ENST00000534141 3746 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
ATF4P18848 AC011460.1-201ENST00000636268 1834 ntBASIC5.6□□□□□ -1.51
ATF4P18848 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
ATF4P18848 IFRD1-217ENST00000621379 3232 ntTSL 2 BASIC5.6□□□□□ -1.51
ATF4P18848 BNIP2-202ENST00000415213 1509 ntTSL 2 BASIC5.6□□□□□ -1.51
ATF4P18848 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC5.6□□□□□ -1.51
ATF4P18848 MTND5P33-201ENST00000571250 1450 ntBASIC5.6□□□□□ -1.51
ATF4P18848 TRIM60P14-201ENST00000513444 1419 ntBASIC5.6□□□□□ -1.51
ATF4P18848 CASC19-248ENST00000641674 1356 ntBASIC5.6□□□□□ -1.51
ATF4P18848 OR52A5-201ENST00000307388 3973 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
ATF4P18848 OR52A5-202ENST00000642125 3993 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
ATF4P18848 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 147.8 ms